RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 ARHGAP35Q9NRY4 1499 aa0.16□□□□□ -2.38
C1GALT1-202ENST00000402468 A0A087WXM4 84 aa0.15□□□□□ -2.39
C1GALT1-202ENST00000402468 NDUFB1O75438 58 aa0.15□□□□□ -2.39
C1GALT1-202ENST00000402468 NDUFA3O95167 84 aa0.15□□□□□ -2.39
C1GALT1-202ENST00000402468 LRRC9Q6ZRR7 1453 aa0.15□□□□□ -2.39
C1GALT1-202ENST00000402468 UMAD1C9J7I0 102 aa0.14□□□□□ -2.39
C1GALT1-202ENST00000402468 SMIM13P0DJ93 91 aa0.14□□□□□ -2.39
C1GALT1-202ENST00000402468 URB2Q14146 1524 aaKnown RBP0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 DCAF1Q9Y4B6 1507 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 BSNQ9UPA5 3926 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 PREX1Q8TCU6 1659 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 HUWE1Q7Z6Z7 4374 aaKnown RBP0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 TNXBP22105 4242 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 HMCN2Q8NDA2 5059 aa0.13□□□□□ -2.39
C1GALT1-202ENST00000402468 ARFGEF2Q9Y6D5 1785 aa0.12□□□□□ -2.39
C1GALT1-202ENST00000402468 FAT2Q9NYQ8 4349 aa0.12□□□□□ -2.39
C1GALT1-202ENST00000402468 M0R2T5 61 aa0.12□□□□□ -2.39
C1GALT1-202ENST00000402468 IFI27P40305 119 aaPredicted RBP0.12□□□□□ -2.39
C1GALT1-202ENST00000402468 DEFB121Q5J5C9 76 aa0.12□□□□□ -2.39
C1GALT1-202ENST00000402468 DCHS2Q6V1P9 2916 aa0.11□□□□□ -2.39
C1GALT1-202ENST00000402468 MYCBP2O75592 4640 aa0.11□□□□□ -2.39
C1GALT1-202ENST00000402468 SPRR2DP22532 72 aa0.11□□□□□ -2.39
C1GALT1-202ENST00000402468 RGPD8O14715 1765 aaPredicted RBP0.11□□□□□ -2.39
C1GALT1-202ENST00000402468 RGPD5Q99666 1765 aa0.11□□□□□ -2.39
C1GALT1-202ENST00000402468 TIAM2Q8IVF5 1701 aa0.1□□□□□ -2.39
C1GALT1-202ENST00000402468 REV3LO60673 3130 aa0.1□□□□□ -2.39
C1GALT1-202ENST00000402468 NREPQ16612 68 aa0.1□□□□□ -2.39
C1GALT1-202ENST00000402468 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
C1GALT1-202ENST00000402468 TNRC6CQ9HCJ0 1690 aaKnown RBP0.1□□□□□ -2.39
C1GALT1-202ENST00000402468 ATP5EP2Q5VTU8 51 aa0.09□□□□□ -2.4
C1GALT1-202ENST00000402468 C18orf32Q8TCD1 76 aa0.09□□□□□ -2.4
C1GALT1-202ENST00000402468 CEP170BQ9Y4F5 1589 aaPredicted RBP0.09□□□□□ -2.4
C1GALT1-202ENST00000402468 FLNCQ14315 2725 aa0.09□□□□□ -2.4
C1GALT1-202ENST00000402468 NBASA2RRP1 2371 aa0.09□□□□□ -2.4
C1GALT1-202ENST00000402468 C4AP0C0L4 1744 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 C4BP0C0L5 1744 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 DEFA5Q01523 94 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 DEFB135Q30KP9 77 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 ACANP16112 2415 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 SETXQ7Z333 2677 aaKnown RBP0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 KDM5DQ9BY66 1539 aa0.08□□□□□ -2.4
C1GALT1-202ENST00000402468 KMT2AQ03164 3969 aa0.07□□□□□ -2.4
C1GALT1-202ENST00000402468 NDUFA4O00483 81 aa0.07□□□□□ -2.4
C1GALT1-202ENST00000402468 LPAP08519 4548 aa0.07□□□□□ -2.4
C1GALT1-202ENST00000402468 NWD1Q149M9 1564 aa0.06□□□□□ -2.4
C1GALT1-202ENST00000402468 COX6B2Q6YFQ2 88 aa0.06□□□□□ -2.4
C1GALT1-202ENST00000402468 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
C1GALT1-202ENST00000402468 SCN11AQ9UI33 1791 aa0.06□□□□□ -2.4
C1GALT1-202ENST00000402468 ABCC1P33527 1531 aa0.05□□□□□ -2.4
C1GALT1-202ENST00000402468 FLNBO75369 2602 aaKnown RBP0.05□□□□□ -2.4
C1GALT1-202ENST00000402468 NESP48681 1621 aa0.05□□□□□ -2.4
C1GALT1-202ENST00000402468 PLCH1Q4KWH8 1693 aa0.05□□□□□ -2.4
C1GALT1-202ENST00000402468 RRBP1Q9P2E9 1410 aaKnown RBP0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 RICTORQ6R327 1708 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 MAGI3Q5TCQ9 1506 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 H3BVH4 76 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 LINC00158P58513 81 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 PRO3102Q9H379 93 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 PCNX1Q96RV3 2341 aa0.04□□□□□ -2.4
C1GALT1-202ENST00000402468 HMGA1P17096 107 aaKnown RBP0.03□□□□□ -2.4
C1GALT1-202ENST00000402468 HSPG2P98160 4391 aa0.03□□□□□ -2.4
C1GALT1-202ENST00000402468 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 CFAP74Q9C0B2 1584 aa0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 SCRIBQ14160 1630 aa0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 CFAP43Q8NDM7 1665 aa0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 DDX60LQ5H9U9 1706 aaKnown RBP0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 PRKDCP78527 4128 aaKnown RBP0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 LCE6AA0A183 80 aa0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 LRRIQ1Q96JM4 1722 aa0.01□□□□□ -2.41
C1GALT1-202ENST00000402468 C3orf79P0CE67 100 aa0.01□□□□□ -2.41
C1GALT1-202ENST00000402468 ANKARQ7Z5J8 1434 aa0.01□□□□□ -2.41
C1GALT1-202ENST00000402468 TRANK1O15050 2925 aa0□□□□□ -2.41
C1GALT1-202ENST00000402468 STAB1Q9NY15 2570 aa0□□□□□ -2.41
C1GALT1-202ENST00000402468 CICQ96RK0 1608 aaPredicted RBP-0.01□□□□□ -2.41
C1GALT1-202ENST00000402468 MYO5CQ9NQX4 1742 aa-0.01□□□□□ -2.41
C1GALT1-202ENST00000402468 ABCA8O94911 1581 aa-0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 H0YGG7 62 aa-0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 SPRR2BP35325 72 aa-0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 DSTQ03001 7570 aaKnown RBP-0.02□□□□□ -2.41
C1GALT1-202ENST00000402468 MAP3K1Q13233 1512 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 TJP1Q07157 1748 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 H0YAA0 97 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 ENHOQ6UWT2 76 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 HILPDAQ9Y5L2 63 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 PTPN23Q9H3S7 1636 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 TENM2Q9NT68 2774 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 ADAMTS12P58397 1594 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 CCDC88BA6NC98 1476 aa-0.03□□□□□ -2.41
C1GALT1-202ENST00000402468 IQGAP3Q86VI3 1631 aa-0.04□□□□□ -2.42
C1GALT1-202ENST00000402468 SMCO4Q9NRQ5 59 aa-0.04□□□□□ -2.42
C1GALT1-202ENST00000402468 CD163L1Q9NR16 1453 aa-0.04□□□□□ -2.42
C1GALT1-202ENST00000402468 HECTD1Q9ULT8 2610 aa-0.04□□□□□ -2.42
C1GALT1-202ENST00000402468 NEBP20929 6669 aa-0.04□□□□□ -2.42
C1GALT1-202ENST00000402468 LRP2P98164 4655 aa-0.05□□□□□ -2.42
C1GALT1-202ENST00000402468 HECTD4Q9Y4D8 3996 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms