RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 LAMA2P24043 3122 aaKnown RBP-1.66□□□□□ -2.68
SNORA40.2-201ENST00000390847 H3BNG1 76 aa-1.67□□□□□ -2.68
SNORA40.2-201ENST00000390847 C14orf144Q96I85 54 aa-1.67□□□□□ -2.68
SNORA40.2-201ENST00000390847 FASNP49327 2511 aaKnown RBP-1.67□□□□□ -2.68
SNORA40.2-201ENST00000390847 DNAH9Q9NYC9 4486 aa-1.67□□□□□ -2.68
SNORA40.2-201ENST00000390847 MAGI2Q86UL8 1455 aa-1.68□□□□□ -2.68
SNORA40.2-201ENST00000390847 COX7BP24311 80 aa-1.68□□□□□ -2.68
SNORA40.2-201ENST00000390847 TCEAL7Q9BRU2 100 aa-1.68□□□□□ -2.68
SNORA40.2-201ENST00000390847 FYCO1Q9BQS8 1478 aa-1.69□□□□□ -2.68
SNORA40.2-201ENST00000390847 DPY30Q9C005 99 aa-1.69□□□□□ -2.68
SNORA40.2-201ENST00000390847 RPL38P63173 70 aaKnown RBP-1.7□□□□□ -2.68
SNORA40.2-201ENST00000390847 UBE2D4Q9Y2X8 147 aa-1.7□□□□□ -2.68
SNORA40.2-201ENST00000390847 TEP1Q99973 2627 aaKnown RBP-1.7□□□□□ -2.68
SNORA40.2-201ENST00000390847 NDUFA3O95167 84 aa-1.71□□□□□ -2.68
SNORA40.2-201ENST00000390847 MT1AP04731 61 aa-1.71□□□□□ -2.68
SNORA40.2-201ENST00000390847 COX6B2Q6YFQ2 88 aa-1.71□□□□□ -2.68
SNORA40.2-201ENST00000390847 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.71□□□□□ -2.68
SNORA40.2-201ENST00000390847 TEX14Q8IWB6 1497 aa-1.72□□□□□ -2.68
SNORA40.2-201ENST00000390847 CRYBG1Q9Y4K1 1723 aa-1.73□□□□□ -2.69
SNORA40.2-201ENST00000390847 ATP6V1G2-DDX39BF2Z307 99 aa-1.73□□□□□ -2.69
SNORA40.2-201ENST00000390847 LYSTQ99698 3801 aa-1.73□□□□□ -2.69
SNORA40.2-201ENST00000390847 AKAP9Q99996 3911 aa-1.73□□□□□ -2.69
SNORA40.2-201ENST00000390847 RGPD2P0DJD1 1756 aa-1.74□□□□□ -2.69
SNORA40.2-201ENST00000390847 UBR3Q6ZT12 1888 aa-1.74□□□□□ -2.69
SNORA40.2-201ENST00000390847 VPS13DQ5THJ4 4388 aa-1.75□□□□□ -2.69
SNORA40.2-201ENST00000390847 ZZEF1O43149 2961 aa-1.75□□□□□ -2.69
SNORA40.2-201ENST00000390847 DMXL1Q9Y485 3027 aa-1.75□□□□□ -2.69
SNORA40.2-201ENST00000390847 PREX1Q8TCU6 1659 aa-1.75□□□□□ -2.69
SNORA40.2-201ENST00000390847 RNF213Q63HN8 5207 aa-1.75□□□□□ -2.69
SNORA40.2-201ENST00000390847 RBP2P50120 134 aa-1.76□□□□□ -2.69
SNORA40.2-201ENST00000390847 GAFA1Q96PS6 74 aa-1.77□□□□□ -2.69
SNORA40.2-201ENST00000390847 CNTLNQ9NXG0 1405 aa-1.77□□□□□ -2.69
SNORA40.2-201ENST00000390847 LRRC9Q6ZRR7 1453 aa-1.77□□□□□ -2.69
SNORA40.2-201ENST00000390847 CLTCQ00610 1675 aaKnown RBP-1.77□□□□□ -2.69
SNORA40.2-201ENST00000390847 MUC17Q685J3 4493 aa-1.78□□□□□ -2.69
SNORA40.2-201ENST00000390847 A0A1B0GUT8 65 aa-1.78□□□□□ -2.69
SNORA40.2-201ENST00000390847 ACBD7Q8N6N7 88 aa-1.78□□□□□ -2.69
SNORA40.2-201ENST00000390847 QSER1Q2KHR3 1735 aa-1.78□□□□□ -2.69
SNORA40.2-201ENST00000390847 PKD1L3Q7Z443 1732 aa-1.78□□□□□ -2.69
SNORA40.2-201ENST00000390847 ANKRD11Q6UB99 2663 aaPredicted RBP-1.79□□□□□ -2.7
SNORA40.2-201ENST00000390847 IQCF6A8MYZ5 107 aa-1.79□□□□□ -2.7
SNORA40.2-201ENST00000390847 CUBNO60494 3623 aa-1.79□□□□□ -2.7
SNORA40.2-201ENST00000390847 EPRSP07814 1512 aaKnown RBP-1.8□□□□□ -2.7
SNORA40.2-201ENST00000390847 LRRC7Q96NW7 1537 aa-1.8□□□□□ -2.7
SNORA40.2-201ENST00000390847 PLGLAQ15195 96 aa-1.8□□□□□ -2.7
SNORA40.2-201ENST00000390847 PKHD1L1Q86WI1 4243 aa-1.8□□□□□ -2.7
SNORA40.2-201ENST00000390847 MYO18BQ8IUG5 2567 aa-1.81□□□□□ -2.7
SNORA40.2-201ENST00000390847 NCMAPQ5T1S8 102 aa-1.81□□□□□ -2.7
SNORA40.2-201ENST00000390847 LAMA1P25391 3075 aa-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 DNAH3Q8TD57 4116 aa-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 C9orf92A6NGG3 77 aa-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 HMGN2P05204 90 aaKnown RBP-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 SMIM11AP58511 58 aa-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 RGPD8O14715 1765 aaPredicted RBP-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 RGPD5Q99666 1765 aa-1.82□□□□□ -2.7
SNORA40.2-201ENST00000390847 CYB5AP00167 134 aa-1.83□□□□□ -2.7
SNORA40.2-201ENST00000390847 FANCAO15360 1455 aa-1.83□□□□□ -2.7
SNORA40.2-201ENST00000390847 ATP10BO94823 1461 aa-1.85□□□□□ -2.71
SNORA40.2-201ENST00000390847 PEA15Q15121 130 aa-1.85□□□□□ -2.71
SNORA40.2-201ENST00000390847 ANKRD50Q9ULJ7 1429 aa-1.85□□□□□ -2.71
SNORA40.2-201ENST00000390847 C4AP0C0L4 1744 aa-1.86□□□□□ -2.71
SNORA40.2-201ENST00000390847 C4BP0C0L5 1744 aa-1.86□□□□□ -2.71
SNORA40.2-201ENST00000390847 MYH4Q9Y623 1939 aa-1.86□□□□□ -2.71
SNORA40.2-201ENST00000390847 M0R143 59 aa-1.87□□□□□ -2.71
SNORA40.2-201ENST00000390847 NIPBLQ6KC79 2804 aaeCLIP-1.87□□□□□ -2.71
SNORA40.2-201ENST00000390847 ALKQ9UM73 1620 aa-1.88□□□□□ -2.71
SNORA40.2-201ENST00000390847 ATP7BP35670 1465 aa-1.88□□□□□ -2.71
SNORA40.2-201ENST00000390847 DSPP15924 2871 aaKnown RBP-1.88□□□□□ -2.71
SNORA40.2-201ENST00000390847 KALRNO60229 2985 aa-1.88□□□□□ -2.71
SNORA40.2-201ENST00000390847 USP9XQ93008 2570 aaPredicted RBP-1.89□□□□□ -2.71
SNORA40.2-201ENST00000390847 WFDC9Q8NEX5 89 aa-1.89□□□□□ -2.71
SNORA40.2-201ENST00000390847 PRO3102Q9H379 93 aa-1.89□□□□□ -2.71
SNORA40.2-201ENST00000390847 MTORP42345 2549 aa-1.89□□□□□ -2.71
SNORA40.2-201ENST00000390847 GYPAP02724 150 aa-1.9□□□□□ -2.71
SNORA40.2-201ENST00000390847 C3orf79P0CE67 100 aa-1.9□□□□□ -2.71
SNORA40.2-201ENST00000390847 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.2-201ENST00000390847 GCN1Q92616 2671 aaKnown RBP-1.91□□□□□ -2.71
SNORA40.2-201ENST00000390847 TRAV21A0A0B4J279 112 aa-1.91□□□□□ -2.72
SNORA40.2-201ENST00000390847 ACACAQ13085 2346 aa-1.92□□□□□ -2.72
SNORA40.2-201ENST00000390847 LINC00158P58513 81 aa-1.92□□□□□ -2.72
SNORA40.2-201ENST00000390847 RGPD1P0DJD0 1748 aa-1.92□□□□□ -2.72
SNORA40.2-201ENST00000390847 C20orf78Q9BR46 151 aa-1.93□□□□□ -2.72
SNORA40.2-201ENST00000390847 ANK3Q12955 4377 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.2-201ENST00000390847 UTP20O75691 2785 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.2-201ENST00000390847 NEXMIFQ5QGS0 1516 aa-1.95□□□□□ -2.72
SNORA40.2-201ENST00000390847 MGAM2Q2M2H8 2515 aa-1.95□□□□□ -2.72
SNORA40.2-201ENST00000390847 WDR87Q6ZQQ6 2873 aa-1.95□□□□□ -2.72
SNORA40.2-201ENST00000390847 APOBP04114 4563 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.2-201ENST00000390847 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.97□□□□□ -2.72
SNORA40.2-201ENST00000390847 LRRK2Q5S007 2527 aa-1.97□□□□□ -2.72
SNORA40.2-201ENST00000390847 DNAH11Q96DT5 4516 aa-1.97□□□□□ -2.73
SNORA40.2-201ENST00000390847 NBEAQ8NFP9 2946 aa-1.98□□□□□ -2.73
SNORA40.2-201ENST00000390847 DNHD1Q96M86 4753 aa-1.99□□□□□ -2.73
SNORA40.2-201ENST00000390847 ABCC10Q5T3U5 1492 aa-1.99□□□□□ -2.73
SNORA40.2-201ENST00000390847 SUPT6HQ7KZ85 1726 aaKnown RBP-2□□□□□ -2.73
SNORA40.2-201ENST00000390847 MYMXA0A1B0GTQ4 84 aa-2□□□□□ -2.73
SNORA40.2-201ENST00000390847 SNHG12Q9BXW3 62 aa-2□□□□□ -2.73
SNORA40.2-201ENST00000390847 MYO3AQ8NEV4 1616 aa-2□□□□□ -2.73
SNORA40.2-201ENST00000390847 VPS13BQ7Z7G8 4022 aa-2.01□□□□□ -2.73
SNORA40.2-201ENST00000390847 LAMA3Q16787 3333 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms