RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 TEX49A0A1B0GTD5 131 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 M0R2N4 97 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 CYB5AP00167 134 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 NMBP08949 121 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 C20orf78Q9BR46 151 aa3.14□□□□□ -1.91
TRAV35-201ENST00000390462 SORL1Q92673 2214 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 TRBV7-3A0A075B6L6 115 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 NDUFC1O43677 76 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 KRTAP10-5P60370 271 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 RPL37AP61513 92 aaKnown RBP3.13□□□□□ -1.91
TRAV35-201ENST00000390462 SERP2Q8N6R1 65 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 TRGV9Q99603 122 aa3.13□□□□□ -1.91
TRAV35-201ENST00000390462 IFI6P09912 130 aa3.12□□□□□ -1.91
TRAV35-201ENST00000390462 ZNF563Q8TA94 476 aa3.12□□□□□ -1.91
TRAV35-201ENST00000390462 MANBALQ9NQG1 85 aa3.12□□□□□ -1.91
TRAV35-201ENST00000390462 CACFD1Q9UGQ2 172 aa3.12□□□□□ -1.91
TRAV35-201ENST00000390462 LOC101927531A0A1B0GV80 90 aa3.11□□□□□ -1.91
TRAV35-201ENST00000390462 H3BUX3 64 aa3.11□□□□□ -1.91
TRAV35-201ENST00000390462 SPATA45Q537H7 98 aa3.11□□□□□ -1.91
TRAV35-201ENST00000390462 RPS27LQ71UM5 84 aaKnown RBP3.11□□□□□ -1.91
TRAV35-201ENST00000390462 C20orf197Q8N268 126 aa3.11□□□□□ -1.91
TRAV35-201ENST00000390462 FAM167A-AS1Q96KT0 104 aa3.11□□□□□ -1.91
TRAV35-201ENST00000390462 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 MRPS14O60783 128 aaKnown RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 HMGN2P05204 90 aaKnown RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 TRAPPC2P0DI81 140 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 TRAPPC2BP0DI82 140 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 UBE2D3P61077 147 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 UBE2D2P62837 147 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 PRB3Q04118 309 aaPredicted RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 SSBP1Q04837 148 aaKnown RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 ZNF56Q15929 161 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 TDRG1Q3Y452 100 aa3.1□□□□□ -1.91
TRAV35-201ENST00000390462 S100A16Q96FQ6 103 aaKnown RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 ZNF625Q96I27 306 aaPredicted RBP3.1□□□□□ -1.91
TRAV35-201ENST00000390462 TRGV2A0A075B6R0 118 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 APOC3P02656 99 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 VMO1Q7Z5L0 202 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 S100A13Q99584 98 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 MED9Q9NWA0 146 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
TRAV35-201ENST00000390462 DNAH11Q96DT5 4516 aa3.09□□□□□ -1.92
TRAV35-201ENST00000390462 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 SYS1-DBNDD2H3BUS1 97 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 LY6G6CO95867 125 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 CCL3L1P16619 93 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 Q5VV11 94 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 CYSTM1Q9H1C7 97 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 PRO1854Q9UHT4 67 aa3.08□□□□□ -1.92
TRAV35-201ENST00000390462 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
TRAV35-201ENST00000390462 HSPG2P98160 4391 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 TNCP24821 2201 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 TRAV22A0A0B4J277 110 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 ELOF1P60002 83 aaKnown RBP3.07□□□□□ -1.92
TRAV35-201ENST00000390462 UQCR10Q9UDW1 63 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 FAT2Q9NYQ8 4349 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
TRAV35-201ENST00000390462 VPS13DQ5THJ4 4388 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 NBDYA0A0U1RRE5 68 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 CHKB-CPT1BH3BT56 60 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 J3QRE1 110 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 C10orf99Q6UWK7 81 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 Q8N6K4 173 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 RABAC1Q9UI14 185 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 DNAH17Q9UFH2 4485 aa3.06□□□□□ -1.92
TRAV35-201ENST00000390462 TRBV6-7A0A0A0MS04 114 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 IGKV3D-7A0A0C4DH55 119 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 IGKV3OR2-268A0A0C4DH90 116 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 IGLC7A0M8Q6 106 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 IGKV2-29A2NJV5 120 aaPredicted RBP3.05□□□□□ -1.92
TRAV35-201ENST00000390462 EDDM3BP56851 147 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
TRAV35-201ENST00000390462 FXYD3Q14802 87 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 COX7B2Q8TF08 81 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 NXT2Q9NPJ8 142 aaKnown RBP3.05□□□□□ -1.92
TRAV35-201ENST00000390462 LENEPQ9Y5L5 61 aa3.05□□□□□ -1.92
TRAV35-201ENST00000390462 PKD1P98161 4303 aa3.04□□□□□ -1.92
TRAV35-201ENST00000390462 COX6CP09669 75 aa3.04□□□□□ -1.92
TRAV35-201ENST00000390462 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
TRAV35-201ENST00000390462 GDF5OSQ5U4N7 250 aa3.04□□□□□ -1.92
TRAV35-201ENST00000390462 NDUFA4L2Q9NRX3 87 aa3.04□□□□□ -1.92
TRAV35-201ENST00000390462 APOBP04114 4563 aaKnown RBP3.03□□□□□ -1.92
TRAV35-201ENST00000390462 A0A0G2JND7 137 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 H7BZZ5 65 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 IGKV4-1P06312 121 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 FXYD4P59646 89 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 XAF1Q6GPH4 301 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 ALKAL2Q6UX46 152 aa3.03□□□□□ -1.92
TRAV35-201ENST00000390462 IGKV2-40A0A087WW87 121 aaPredicted RBP3.02□□□□□ -1.93
TRAV35-201ENST00000390462 IGKV2D-40P01614 121 aaPredicted RBP3.02□□□□□ -1.93
TRAV35-201ENST00000390462 RPL38P63173 70 aaKnown RBP3.02□□□□□ -1.93
TRAV35-201ENST00000390462 FAM74A4Q5TZK3 123 aa3.02□□□□□ -1.93
TRAV35-201ENST00000390462 C5orf56Q8N8D9 126 aa3.02□□□□□ -1.93
TRAV35-201ENST00000390462 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
TRAV35-201ENST00000390462 PPP1R17O96001 155 aa3.01□□□□□ -1.93
TRAV35-201ENST00000390462 DEFB136Q30KP8 78 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms