RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 SCN11AQ9UI33 1791 aa0.13□□□□□ -2.39
RNU6-140P-201ENST00000384566 TNXBP22105 4242 aa0.12□□□□□ -2.39
RNU6-140P-201ENST00000384566 UMAD1C9J7I0 102 aa0.12□□□□□ -2.39
RNU6-140P-201ENST00000384566 M0R2T5 61 aa0.12□□□□□ -2.39
RNU6-140P-201ENST00000384566 WFDC13Q8IUB5 93 aa0.12□□□□□ -2.39
RNU6-140P-201ENST00000384566 ABCA2Q9BZC7 2435 aa0.12□□□□□ -2.39
RNU6-140P-201ENST00000384566 CFAP43Q8NDM7 1665 aa0.11□□□□□ -2.39
RNU6-140P-201ENST00000384566 ALMS1Q8TCU4 4167 aa0.11□□□□□ -2.39
RNU6-140P-201ENST00000384566 PTPN13Q12923 2485 aa0.11□□□□□ -2.39
RNU6-140P-201ENST00000384566 CELSR1Q9NYQ6 3014 aa0.11□□□□□ -2.39
RNU6-140P-201ENST00000384566 C4AP0C0L4 1744 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 C4BP0C0L5 1744 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 KMT2AQ03164 3969 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 A0A087WXM4 84 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 IFI6P09912 130 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 IFI27P40305 119 aaPredicted RBP0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 HMCN1Q96RW7 5635 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 ANKARQ7Z5J8 1434 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 CHD6Q8TD26 2715 aa0.1□□□□□ -2.39
RNU6-140P-201ENST00000384566 MAP3K1Q13233 1512 aa0.09□□□□□ -2.39
RNU6-140P-201ENST00000384566 ABCA8O94911 1581 aa0.09□□□□□ -2.4
RNU6-140P-201ENST00000384566 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.09□□□□□ -2.4
RNU6-140P-201ENST00000384566 LCE6AA0A183 80 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 NDUFA3O95167 84 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 SMIM13P0DJ93 91 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 NREPQ16612 68 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 C18orf32Q8TCD1 76 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 SPRR2GQ9BYE4 73 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 UBR5O95071 2799 aaPredicted RBP0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 PLCH1Q4KWH8 1693 aa0.08□□□□□ -2.4
RNU6-140P-201ENST00000384566 MUC5ACP98088 5654 aa0.07□□□□□ -2.4
RNU6-140P-201ENST00000384566 PRKDCP78527 4128 aaKnown RBP0.07□□□□□ -2.4
RNU6-140P-201ENST00000384566 HSPG2P98160 4391 aa0.07□□□□□ -2.4
RNU6-140P-201ENST00000384566 DEFB135Q30KP9 77 aa0.06□□□□□ -2.4
RNU6-140P-201ENST00000384566 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
RNU6-140P-201ENST00000384566 CACNA1AO00555 2505 aa0.06□□□□□ -2.4
RNU6-140P-201ENST00000384566 CICQ96RK0 1608 aaPredicted RBP0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 AHNAK2Q8IVF2 5795 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 CD163L1Q9NR16 1453 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 DDX60LQ5H9U9 1706 aaKnown RBP0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 RICTORQ6R327 1708 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 NDUFA4O00483 81 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 HMGA1P17096 107 aaKnown RBP0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 PKD1L1Q8TDX9 2849 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 SPTA1P02549 2419 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 EP300Q09472 2414 aaPredicted RBP0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 MDN1Q9NU22 5596 aa0.05□□□□□ -2.4
RNU6-140P-201ENST00000384566 ANKRD50Q9ULJ7 1429 aa0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 LRRIQ1Q96JM4 1722 aa0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 ADAMTS12P58397 1594 aa0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 C3orf79P0CE67 100 aa0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 SPRR2BP35325 72 aa0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 EIF2AK4Q9P2K8 1649 aaKnown RBP0.04□□□□□ -2.4
RNU6-140P-201ENST00000384566 PLXNC1O60486 1568 aa0.03□□□□□ -2.4
RNU6-140P-201ENST00000384566 PRO3102Q9H379 93 aa0.03□□□□□ -2.4
RNU6-140P-201ENST00000384566 CNOT1A5YKK6 2376 aaKnown RBP0.03□□□□□ -2.41
RNU6-140P-201ENST00000384566 HECTD4Q9Y4D8 3996 aa0.03□□□□□ -2.41
RNU6-140P-201ENST00000384566 WIZO95785 1651 aa0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 MYO5CQ9NQX4 1742 aa0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 ATRQ13535 2644 aa0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 DEPDC5O75140 1603 aa0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 LRP1BQ9NZR2 4599 aa0□□□□□ -2.41
RNU6-140P-201ENST00000384566 LINC00158P58513 81 aa0□□□□□ -2.41
RNU6-140P-201ENST00000384566 IQGAP3Q86VI3 1631 aa0□□□□□ -2.41
RNU6-140P-201ENST00000384566 LMTK2Q8IWU2 1503 aa0□□□□□ -2.41
RNU6-140P-201ENST00000384566 THOC2Q8NI27 1593 aaKnown RBP0□□□□□ -2.41
RNU6-140P-201ENST00000384566 KMT2DO14686 5537 aa-0□□□□□ -2.41
RNU6-140P-201ENST00000384566 ITSN1Q15811 1721 aa-0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 PARP4Q9UKK3 1724 aaKnown RBP-0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 CHD8Q9HCK8 2581 aa-0.01□□□□□ -2.41
RNU6-140P-201ENST00000384566 WNK1Q9H4A3 2382 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 UGGT2Q9NYU1 1516 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 RALGAPBQ86X10 1494 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 HFM1A2PYH4 1435 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 APC2O95996 2303 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 LRP2P98164 4655 aa-0.02□□□□□ -2.41
RNU6-140P-201ENST00000384566 KNL1Q8NG31 2342 aa-0.03□□□□□ -2.41
RNU6-140P-201ENST00000384566 TJP1Q07157 1748 aa-0.03□□□□□ -2.41
RNU6-140P-201ENST00000384566 H0YGG7 62 aa-0.03□□□□□ -2.41
RNU6-140P-201ENST00000384566 REV3LO60673 3130 aa-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 RNF17Q9BXT8 1623 aaKnown RBP-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 DEFB131BA0A096LNP1 70 aa-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 H0YAA0 97 aa-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 H3BVH4 76 aa-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 MRPL33O75394 65 aaKnown RBP-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 SMCO4Q9NRQ5 59 aa-0.04□□□□□ -2.42
RNU6-140P-201ENST00000384566 FLNCQ14315 2725 aa-0.05□□□□□ -2.42
RNU6-140P-201ENST00000384566 UBL5Q9BZL1 73 aa-0.05□□□□□ -2.42
RNU6-140P-201ENST00000384566 KCNQ1DNQ9H478 68 aa-0.05□□□□□ -2.42
RNU6-140P-201ENST00000384566 NRAPQ86VF7 1730 aa-0.05□□□□□ -2.42
RNU6-140P-201ENST00000384566 DUOX2Q9NRD8 1548 aa-0.06□□□□□ -2.42
RNU6-140P-201ENST00000384566 LYNX1G3V0Z9 82 aa-0.06□□□□□ -2.42
RNU6-140P-201ENST00000384566 DEFA5Q01523 94 aa-0.06□□□□□ -2.42
RNU6-140P-201ENST00000384566 CDC42BPGQ6DT37 1551 aa-0.06□□□□□ -2.42
RNU6-140P-201ENST00000384566 MAP1BP46821 2468 aaKnown RBP-0.07□□□□□ -2.42
RNU6-140P-201ENST00000384566 ACANP16112 2415 aa-0.07□□□□□ -2.42
RNU6-140P-201ENST00000384566 ZC3H13Q5T200 1668 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms