RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.05□□□□□ -2.42
SNAPC3-201ENST00000380799 CSPG4Q6UVK1 2322 aa-0.05□□□□□ -2.42
SNAPC3-201ENST00000380799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.05□□□□□ -2.42
SNAPC3-201ENST00000380799 PIK3C2BO00750 1634 aa-0.05□□□□□ -2.42
SNAPC3-201ENST00000380799 PTPN13Q12923 2485 aa-0.06□□□□□ -2.42
SNAPC3-201ENST00000380799 DOT1LQ8TEK3 1739 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 DCAF1Q9Y4B6 1507 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 BSNQ9UPA5 3926 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 ERVK-7P63135 1459 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 COX6B2Q6YFQ2 88 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
SNAPC3-201ENST00000380799 NDUFA3O95167 84 aa-0.08□□□□□ -2.42
SNAPC3-201ENST00000380799 DEFB135Q30KP9 77 aa-0.08□□□□□ -2.42
SNAPC3-201ENST00000380799 MAGI3Q5TCQ9 1506 aa-0.08□□□□□ -2.42
SNAPC3-201ENST00000380799 ARHGAP35Q9NRY4 1499 aa-0.09□□□□□ -2.42
SNAPC3-201ENST00000380799 NWD1Q149M9 1564 aa-0.09□□□□□ -2.42
SNAPC3-201ENST00000380799 SPRR2BP35325 72 aa-0.09□□□□□ -2.42
SNAPC3-201ENST00000380799 ALMS1Q8TCU4 4167 aa-0.09□□□□□ -2.42
SNAPC3-201ENST00000380799 H3BUT2 72 aa-0.1□□□□□ -2.43
SNAPC3-201ENST00000380799 NSD1Q96L73 2696 aaPredicted RBP-0.11□□□□□ -2.43
SNAPC3-201ENST00000380799 UMAD1C9J7I0 102 aa-0.11□□□□□ -2.43
SNAPC3-201ENST00000380799 ATP5EP2Q5VTU8 51 aa-0.11□□□□□ -2.43
SNAPC3-201ENST00000380799 ARFGEF2Q9Y6D5 1785 aa-0.11□□□□□ -2.43
SNAPC3-201ENST00000380799 KDM5DQ9BY66 1539 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 NESP48681 1621 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 C4AP0C0L4 1744 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 C4BP0C0L5 1744 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 IFI6P09912 130 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 FLNCQ14315 2725 aa-0.12□□□□□ -2.43
SNAPC3-201ENST00000380799 DEFB121Q5J5C9 76 aa-0.13□□□□□ -2.43
SNAPC3-201ENST00000380799 ATRQ13535 2644 aa-0.14□□□□□ -2.43
SNAPC3-201ENST00000380799 IFI27P40305 119 aaPredicted RBP-0.14□□□□□ -2.43
SNAPC3-201ENST00000380799 BVES-AS1Q5T3Y7 98 aa-0.14□□□□□ -2.43
SNAPC3-201ENST00000380799 CICQ96RK0 1608 aaPredicted RBP-0.15□□□□□ -2.43
SNAPC3-201ENST00000380799 A0A087WXM4 84 aa-0.15□□□□□ -2.43
SNAPC3-201ENST00000380799 EP300Q09472 2414 aaPredicted RBP-0.15□□□□□ -2.43
SNAPC3-201ENST00000380799 DSTQ03001 7570 aaKnown RBP-0.15□□□□□ -2.43
SNAPC3-201ENST00000380799 LRP2P98164 4655 aa-0.16□□□□□ -2.43
SNAPC3-201ENST00000380799 ABCC1P33527 1531 aa-0.16□□□□□ -2.43
SNAPC3-201ENST00000380799 PRKDCP78527 4128 aaKnown RBP-0.16□□□□□ -2.44
SNAPC3-201ENST00000380799 CCDC88BA6NC98 1476 aa-0.16□□□□□ -2.44
SNAPC3-201ENST00000380799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.16□□□□□ -2.44
SNAPC3-201ENST00000380799 SMIM13P0DJ93 91 aa-0.17□□□□□ -2.44
SNAPC3-201ENST00000380799 NREPQ16612 68 aa-0.17□□□□□ -2.44
SNAPC3-201ENST00000380799 CFAP74Q9C0B2 1584 aa-0.17□□□□□ -2.44
SNAPC3-201ENST00000380799 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
SNAPC3-201ENST00000380799 ADAMTS12P58397 1594 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 PTPN23Q9H3S7 1636 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 LCE6AA0A183 80 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 PRO3102Q9H379 93 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 CFAP43Q8NDM7 1665 aa-0.19□□□□□ -2.44
SNAPC3-201ENST00000380799 SPTA1P02549 2419 aa-0.2□□□□□ -2.44
SNAPC3-201ENST00000380799 NDUFA4O00483 81 aa-0.2□□□□□ -2.44
SNAPC3-201ENST00000380799 RRBP1Q9P2E9 1410 aaKnown RBP-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 SCN11AQ9UI33 1791 aa-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 C3orf79P0CE67 100 aa-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 SCRIBQ14160 1630 aa-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 REV3LO60673 3130 aa-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 PLCH1Q4KWH8 1693 aa-0.21□□□□□ -2.44
SNAPC3-201ENST00000380799 C18orf32Q8TCD1 76 aa-0.22□□□□□ -2.44
SNAPC3-201ENST00000380799 FLNAP21333 2647 aaKnown RBP-0.22□□□□□ -2.45
SNAPC3-201ENST00000380799 DCHS2Q6V1P9 2916 aa-0.23□□□□□ -2.45
SNAPC3-201ENST00000380799 LINC00158P58513 81 aa-0.23□□□□□ -2.45
SNAPC3-201ENST00000380799 PLXNC1O60486 1568 aa-0.23□□□□□ -2.45
SNAPC3-201ENST00000380799 RICTORQ6R327 1708 aa-0.24□□□□□ -2.45
SNAPC3-201ENST00000380799 H0YGG7 62 aa-0.24□□□□□ -2.45
SNAPC3-201ENST00000380799 CHD8Q9HCK8 2581 aa-0.24□□□□□ -2.45
SNAPC3-201ENST00000380799 STAB1Q9NY15 2570 aa-0.25□□□□□ -2.45
SNAPC3-201ENST00000380799 HMGA1P17096 107 aaKnown RBP-0.25□□□□□ -2.45
SNAPC3-201ENST00000380799 WIZO95785 1651 aa-0.25□□□□□ -2.45
SNAPC3-201ENST00000380799 DDX60LQ5H9U9 1706 aaKnown RBP-0.25□□□□□ -2.45
SNAPC3-201ENST00000380799 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
SNAPC3-201ENST00000380799 WNK1Q9H4A3 2382 aa-0.26□□□□□ -2.45
SNAPC3-201ENST00000380799 MAP3K1Q13233 1512 aa-0.26□□□□□ -2.45
SNAPC3-201ENST00000380799 ANKARQ7Z5J8 1434 aa-0.26□□□□□ -2.45
SNAPC3-201ENST00000380799 DEFA5Q01523 94 aa-0.26□□□□□ -2.45
SNAPC3-201ENST00000380799 SETXQ7Z333 2677 aaKnown RBP-0.27□□□□□ -2.45
SNAPC3-201ENST00000380799 ABCA8O94911 1581 aa-0.27□□□□□ -2.45
SNAPC3-201ENST00000380799 CD163L1Q9NR16 1453 aa-0.27□□□□□ -2.45
SNAPC3-201ENST00000380799 APC2O95996 2303 aa-0.27□□□□□ -2.45
SNAPC3-201ENST00000380799 H0YAA0 97 aa-0.28□□□□□ -2.45
SNAPC3-201ENST00000380799 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
SNAPC3-201ENST00000380799 DEPDC5O75140 1603 aa-0.29□□□□□ -2.46
SNAPC3-201ENST00000380799 ANKRD50Q9ULJ7 1429 aa-0.3□□□□□ -2.46
SNAPC3-201ENST00000380799 MAP1BP46821 2468 aaKnown RBP-0.3□□□□□ -2.46
SNAPC3-201ENST00000380799 FLNBO75369 2602 aaKnown RBP-0.3□□□□□ -2.46
SNAPC3-201ENST00000380799 ACANP16112 2415 aa-0.3□□□□□ -2.46
SNAPC3-201ENST00000380799 SPRR2AP35326 72 aa-0.31□□□□□ -2.46
SNAPC3-201ENST00000380799 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
SNAPC3-201ENST00000380799 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
SNAPC3-201ENST00000380799 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.31□□□□□ -2.46
SNAPC3-201ENST00000380799 CNOT1A5YKK6 2376 aaKnown RBP-0.32□□□□□ -2.46
SNAPC3-201ENST00000380799 LMTK2Q8IWU2 1503 aa-0.33□□□□□ -2.46
SNAPC3-201ENST00000380799 KNL1Q8NG31 2342 aa-0.34□□□□□ -2.46
SNAPC3-201ENST00000380799 SRRM2Q9UQ35 2752 aaKnown RBP-0.34□□□□□ -2.46
SNAPC3-201ENST00000380799 ITSN1Q15811 1721 aa-0.35□□□□□ -2.47
SNAPC3-201ENST00000380799 HFM1A2PYH4 1435 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms