RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 Q6ZQY7 126 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 ST20-AS1Q8NBB2 130 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 LINC00208Q96KT6 92 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
PTPRC-202ENST00000367364 GVQW2A0A096LPI5 108 aaPredicted RBP2.11□□□□□ -2.07
PTPRC-202ENST00000367364 SPINK13Q1W4C9 94 aa2.11□□□□□ -2.07
PTPRC-202ENST00000367364 TMEM105Q8N8V8 129 aa2.11□□□□□ -2.07
PTPRC-202ENST00000367364 PRR15LQ9BU68 103 aa2.11□□□□□ -2.07
PTPRC-202ENST00000367364 LAMA3Q16787 3333 aa2.1□□□□□ -2.07
PTPRC-202ENST00000367364 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
PTPRC-202ENST00000367364 PRM2P04554 102 aa2.1□□□□□ -2.07
PTPRC-202ENST00000367364 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
PTPRC-202ENST00000367364 KLK12Q9UKR0 248 aa2.1□□□□□ -2.07
PTPRC-202ENST00000367364 FRYQ5TBA9 3013 aa2.1□□□□□ -2.07
PTPRC-202ENST00000367364 MAP1BP46821 2468 aaKnown RBP2.1□□□□□ -2.07
PTPRC-202ENST00000367364 TNRC18O15417 2968 aaPredicted RBP2.09□□□□□ -2.07
PTPRC-202ENST00000367364 IGKV2D-24A0A075B6R9 120 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 TRGV4A0A0C4DH28 118 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 A0A1W2PNM2 257 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 A6NED7 52 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 ATP1A1-AS1Q5TC04 95 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 C11orf71Q6IPW1 123 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 Q8NAQ8 132 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
PTPRC-202ENST00000367364 REV3LO60673 3130 aa2.09□□□□□ -2.08
PTPRC-202ENST00000367364 LAMA2P24043 3122 aaKnown RBP2.09□□□□□ -2.08
PTPRC-202ENST00000367364 C2CD3Q4AC94 2353 aa2.09□□□□□ -2.08
PTPRC-202ENST00000367364 CEP290O15078 2479 aa2.09□□□□□ -2.08
PTPRC-202ENST00000367364 VCANP13611 3396 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 IGLV1-51P01701 117 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 MP68P56378 58 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 SPINK7P58062 85 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 CASC2Q6XLA1 102 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 COA5Q86WW8 74 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 FDCSPQ8NFU4 85 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 TOMM7Q9P0U1 55 aa2.08□□□□□ -2.08
PTPRC-202ENST00000367364 ACACAQ13085 2346 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 A6NDX4 124 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 LYNX1G3V0Z9 82 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 LYNX1P0DP58 116 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 DEFB112Q30KQ8 113 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 FBXL19-AS1Q494R0 122 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 WFDC10AQ9H1F0 79 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 TRIOO75962 3097 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 FREM2Q5SZK8 3169 aa2.07□□□□□ -2.08
PTPRC-202ENST00000367364 ANKHD1Q8IWZ3 2542 aaKnown RBP2.07□□□□□ -2.08
PTPRC-202ENST00000367364 CDH23Q9H251 3354 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 FRYLO94915 3013 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 SPTA1P02549 2419 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 K7EQZ3 153 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 KPRPQ5T749 579 aaPredicted RBP2.06□□□□□ -2.08
PTPRC-202ENST00000367364 SPATA8Q6RVD6 105 aa2.06□□□□□ -2.08
PTPRC-202ENST00000367364 KALRNO60229 2985 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 WDFY3Q8IZQ1 3526 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
PTPRC-202ENST00000367364 IGKV3-7A0A075B6H7 116 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 IGLV8-61A0A075B6I0 122 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 IGLV1-50A0A075B6I6 118 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 DEFB131BA0A096LNP1 70 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 B4DSR2 109 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 ZNF861PO60384 105 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 INSP01308 110 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 PRR4Q16378 134 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 ADM2Q7Z4H4 148 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 LAMA1P25391 3075 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 SPEGQ15772 3267 aa2.05□□□□□ -2.08
PTPRC-202ENST00000367364 DSPP15924 2871 aaKnown RBP2.04□□□□□ -2.08
PTPRC-202ENST00000367364 H0Y9P7 68 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 SPRR1AP35321 89 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 DEFB131AP59861 70 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 SPAG11BQ08648 103 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 DMDP11532 3685 aa2.04□□□□□ -2.08
PTPRC-202ENST00000367364 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
PTPRC-202ENST00000367364 HRES1P13985 223 aa2.03□□□□□ -2.08
PTPRC-202ENST00000367364 C7orf33Q8WU49 177 aa2.03□□□□□ -2.08
PTPRC-202ENST00000367364 CREBBPQ92793 2442 aa2.03□□□□□ -2.08
PTPRC-202ENST00000367364 KMT2BQ9UMN6 2715 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-202ENST00000367364 TRGV1A0A0A0MS02 117 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 UNQ6190/PRO20217Q6UXQ8 127 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 CHCHD10Q8WYQ3 142 aaPredicted RBP2.02□□□□□ -2.09
PTPRC-202ENST00000367364 RETNLBQ9BQ08 111 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 ZNF702PQ9H963 129 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 C6orf48Q9UBA6 75 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 SPG11Q96JI7 2443 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 DCHS1Q96JQ0 3298 aa2.02□□□□□ -2.09
PTPRC-202ENST00000367364 PRB1P04280 392 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 ROMO1P60602 79 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 DEFB109BQ30KR1 87 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 KRTAP26-1Q6PEX3 210 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 CLPSL2Q6UWE3 100 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 C16orf74Q96GX8 76 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 PIEZO2Q9H5I5 2752 aa2.01□□□□□ -2.09
PTPRC-202ENST00000367364 PRUNE2Q8WUY3 3088 aa2□□□□□ -2.09
PTPRC-202ENST00000367364 NBASA2RRP1 2371 aa2□□□□□ -2.09
PTPRC-202ENST00000367364 CSPG4Q6UVK1 2322 aa2□□□□□ -2.09
PTPRC-202ENST00000367364 MMP24-AS1A0A0U1RRL7 71 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms