RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ATXN8Q156A1 80 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 TNCP24821 2201 aa1.68□□□□□ -2.14
LRRC39-204ENST00000620882 URB1O60287 2271 aaKnown RBP1.68□□□□□ -2.14
LRRC39-204ENST00000620882 HIVEP2P31629 2446 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 ACYP2P14621 99 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 ATP5EP2Q5VTU8 51 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 LINC00846Q9NV44 126 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 G3V318 75 aa1.67□□□□□ -2.14
LRRC39-204ENST00000620882 SLIT1O75093 1534 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 SSC5DA1L4H1 1573 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 VWDEQ8N2E2 1590 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 CICQ96RK0 1608 aaPredicted RBP1.66□□□□□ -2.14
LRRC39-204ENST00000620882 NREPQ16612 68 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 AHCTF1Q8WYP5 2266 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
LRRC39-204ENST00000620882 UGGT1Q9NYU2 1555 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 ABCA5Q8WWZ7 1642 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 PLXNB2O15031 1838 aa1.66□□□□□ -2.14
LRRC39-204ENST00000620882 CACNA1BQ00975 2339 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 A0A096LNT2 108 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 A0A1B0GUT8 65 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 LY6G6CO95867 125 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 KRTAP13-4Q3LI77 160 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 KRTAP13-1Q8IUC0 172 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 WFDC9Q8NEX5 89 aa1.65□□□□□ -2.14
LRRC39-204ENST00000620882 TMEM263Q8WUH6 116 aaKnown RBP1.65□□□□□ -2.14
LRRC39-204ENST00000620882 GOLGA4Q13439 2230 aaKnown RBP1.65□□□□□ -2.15
LRRC39-204ENST00000620882 Q6ZQY7 126 aa1.65□□□□□ -2.15
LRRC39-204ENST00000620882 FLG2Q5D862 2391 aaPredicted RBP1.64□□□□□ -2.15
LRRC39-204ENST00000620882 POLR1AO95602 1720 aaPredicted RBP1.64□□□□□ -2.15
LRRC39-204ENST00000620882 KIAA0556O60303 1618 aa1.64□□□□□ -2.15
LRRC39-204ENST00000620882 PRB1P04280 392 aa1.64□□□□□ -2.15
LRRC39-204ENST00000620882 ENHOQ6UWT2 76 aa1.64□□□□□ -2.15
LRRC39-204ENST00000620882 CPS1P31327 1500 aa1.64□□□□□ -2.15
LRRC39-204ENST00000620882 CAV3P56539 151 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 DEFB112Q30KQ8 113 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 BPTFQ12830 3046 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 ANKRD36CQ5JPF3 1778 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 SAMD9Q5K651 1589 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 SNRPGP15A8MWD9 76 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 CROCC2H7BZ55 1655 aa1.63□□□□□ -2.15
LRRC39-204ENST00000620882 VWFP04275 2813 aa1.62□□□□□ -2.15
LRRC39-204ENST00000620882 EIF2AK4Q9P2K8 1649 aaKnown RBP1.62□□□□□ -2.15
LRRC39-204ENST00000620882 FBN1P35555 2871 aaKnown RBP1.62□□□□□ -2.15
LRRC39-204ENST00000620882 DEFB103AP81534 67 aa1.62□□□□□ -2.15
LRRC39-204ENST00000620882 BIVM-ERCC5R4GMW8 1640 aa1.62□□□□□ -2.15
LRRC39-204ENST00000620882 ABCC6O95255 1503 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 TJP1Q07157 1748 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 LCE6AA0A183 80 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 FCER1GP30273 86 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 HAMPP81172 84 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 Q6ZRX8 168 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 CRIPTQ9P021 101 aa1.61□□□□□ -2.15
LRRC39-204ENST00000620882 GVQW2A0A096LPI5 108 aaPredicted RBP1.6□□□□□ -2.15
LRRC39-204ENST00000620882 A0A1B0GU69 56 aa1.6□□□□□ -2.15
LRRC39-204ENST00000620882 GAFA1Q96PS6 74 aa1.6□□□□□ -2.15
LRRC39-204ENST00000620882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.6□□□□□ -2.15
LRRC39-204ENST00000620882 MAST1Q9Y2H9 1570 aa1.6□□□□□ -2.15
LRRC39-204ENST00000620882 SETXQ7Z333 2677 aaKnown RBP1.6□□□□□ -2.15
LRRC39-204ENST00000620882 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
LRRC39-204ENST00000620882 SSBP3-AS1Q7Z2R9 100 aa1.59□□□□□ -2.15
LRRC39-204ENST00000620882 SYCP2Q9BX26 1530 aa1.59□□□□□ -2.15
LRRC39-204ENST00000620882 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.16
LRRC39-204ENST00000620882 REV3LO60673 3130 aa1.59□□□□□ -2.16
LRRC39-204ENST00000620882 TRBV30A0A0K0K1B3 111 aa1.59□□□□□ -2.16
LRRC39-204ENST00000620882 TRBV6-1A0A0K0K1D8 114 aa1.59□□□□□ -2.16
LRRC39-204ENST00000620882 SMIM4Q8WVI0 70 aa1.59□□□□□ -2.16
LRRC39-204ENST00000620882 DOPEY2Q9Y3R5 2298 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 JMJD1CQ15652 2540 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 NAV3Q8IVL0 2385 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 PLAC4Q8WY50 150 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 EFCAB6Q5THR3 1501 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 LY75O60449 1722 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 RYR2Q92736 4967 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 A0A0D9SFI3 127 aa1.58□□□□□ -2.16
LRRC39-204ENST00000620882 PLCE1Q9P212 2302 aa1.57□□□□□ -2.16
LRRC39-204ENST00000620882 COX17Q14061 63 aa1.57□□□□□ -2.16
LRRC39-204ENST00000620882 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.57□□□□□ -2.16
LRRC39-204ENST00000620882 EPG5Q9HCE0 2579 aa1.56□□□□□ -2.16
LRRC39-204ENST00000620882 CNOT1A5YKK6 2376 aaKnown RBP1.55□□□□□ -2.16
LRRC39-204ENST00000620882 LRRC37A2A6NM11 1700 aa1.55□□□□□ -2.16
LRRC39-204ENST00000620882 ANKHD1Q8IWZ3 2542 aaKnown RBP1.55□□□□□ -2.16
LRRC39-204ENST00000620882 ANKRD50Q9ULJ7 1429 aa1.55□□□□□ -2.16
LRRC39-204ENST00000620882 DOPEY1Q5JWR5 2465 aa1.55□□□□□ -2.16
LRRC39-204ENST00000620882 AGLP35573 1532 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 NDUFA4O00483 81 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 NDUFB1O75438 58 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 SMIM11BQ8TCY0 68 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 CACNA1EQ15878 2313 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 ASH1LQ9NR48 2969 aaKnown RBP1.54□□□□□ -2.16
LRRC39-204ENST00000620882 RYR1P21817 5038 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 COX7BP24311 80 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 NAV2Q8IVL1 2488 aa1.54□□□□□ -2.16
LRRC39-204ENST00000620882 PRH1P02810 166 aa1.53□□□□□ -2.16
LRRC39-204ENST00000620882 OTOGLQ3ZCN5 2332 aa1.53□□□□□ -2.16
LRRC39-204ENST00000620882 QSER1Q2KHR3 1735 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms