RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 ODF3BA8MYP8 253 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 IGLV1-47P01700 117 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 WFDC10AQ9H1F0 79 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 NBASA2RRP1 2371 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 P0C880 135 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 LINC00167Q96N53 147 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 RNF5Q99942 180 aa3.69□□□□□ -1.82
CTDSPL2-206ENST00000559175 AKAP6Q13023 2319 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 PKDREJQ9NTG1 2253 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 DEFB112Q30KQ8 113 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 C22orf24Q9Y442 160 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 ABCA1O95477 2261 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
CTDSPL2-206ENST00000559175 DNAH1Q9P2D7 4330 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 ASPMQ8IZT6 3477 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 A0A0J9YX75 114 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 SPINK7P58062 85 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 C10orf113Q5VZT2 155 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 Q86TA4 180 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 CR1P17927 2039 aa3.67□□□□□ -1.82
CTDSPL2-206ENST00000559175 OBSCN-AS1Q96MR7 158 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 PRKDCP78527 4128 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 ZFHX3Q15911 3703 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 RTL8CO15255 209 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 PCNX1Q96RV3 2341 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 ZFHX2Q9C0A1 2572 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 SPTAN1Q13813 2472 aaKnown RBP3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 IGKV1-17P01599 117 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 LEAP2Q969E1 77 aa3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 ZNF469Q96JG9 3925 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL2-206ENST00000559175 RPL39P5Q59GN2 51 aa3.65□□□□□ -1.82
CTDSPL2-206ENST00000559175 AMELXQ99217 191 aa3.65□□□□□ -1.82
CTDSPL2-206ENST00000559175 LENEPQ9Y5L5 61 aa3.65□□□□□ -1.82
CTDSPL2-206ENST00000559175 TRBV6-1A0A0K0K1D8 114 aa3.65□□□□□ -1.82
CTDSPL2-206ENST00000559175 LYSTQ99698 3801 aa3.65□□□□□ -1.83
CTDSPL2-206ENST00000559175 H0YGX0 51 aa3.65□□□□□ -1.83
CTDSPL2-206ENST00000559175 COX7B2Q8TF08 81 aa3.65□□□□□ -1.83
CTDSPL2-206ENST00000559175 TTC28Q96AY4 2481 aa3.65□□□□□ -1.83
CTDSPL2-206ENST00000559175 USF3Q68DE3 2245 aa3.65□□□□□ -1.83
CTDSPL2-206ENST00000559175 NDUFA4O00483 81 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 CTSGP08311 255 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 CFAP47Q6ZTR5 3102 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 MED13LQ71F56 2210 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 APELAP0DMC3 54 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 Q9BRP9 147 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGSF10Q6WRI0 2623 aa3.64□□□□□ -1.83
CTDSPL2-206ENST00000559175 CREBBPQ92793 2442 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 Q6ZTI0 123 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGLV2-18A0A075B6J9 118 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 A0A1B0GUV1 79 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 GAS8-AS1O95177 125 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGHV3-53P01767 116 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 FBN2P35556 2912 aa3.63□□□□□ -1.83
CTDSPL2-206ENST00000559175 H0Y9P7 68 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 PANO1I0J062 215 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 KALRNO60229 2985 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 ANKRD17O75179 2603 aaKnown RBP3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 J3QKU1 62 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 KRTAP1-1Q07627 177 aa3.62□□□□□ -1.83
CTDSPL2-206ENST00000559175 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 A0A1W2PPR1 153 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 FREM2Q5SZK8 3169 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.61□□□□□ -1.831e-6■■■□□ 14.9
CTDSPL2-206ENST00000559175 ZZEF1O43149 2961 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGLV10-54A0A075B6I4 117 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 SLPIP03973 132 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 PRCDQ00LT1 54 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 DOPEY2Q9Y3R5 2298 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 A0A087WYN8 130 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 CELSR3Q9NYQ7 3312 aa3.61□□□□□ -1.83
CTDSPL2-206ENST00000559175 HRNRQ86YZ3 2850 aaPredicted RBP3.6□□□□□ -1.83
CTDSPL2-206ENST00000559175 FAT2Q9NYQ8 4349 aa3.6□□□□□ -1.83
CTDSPL2-206ENST00000559175 COL6A6A6NMZ7 2263 aa3.6□□□□□ -1.83
CTDSPL2-206ENST00000559175 A8MTW9 85 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGLV7-43P04211 117 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 CCL3L1P16619 93 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 IGKV3-20P01619 116 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 MINOS1Q5TGZ0 78 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 CACNA1BQ00975 2339 aa3.59□□□□□ -1.83
CTDSPL2-206ENST00000559175 ZNF861PO60384 105 aa3.59□□□□□ -1.84
CTDSPL2-206ENST00000559175 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.84
CTDSPL2-206ENST00000559175 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
CTDSPL2-206ENST00000559175 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
CTDSPL2-206ENST00000559175 H3BUA1 57 aa3.58□□□□□ -1.84
CTDSPL2-206ENST00000559175 COA5Q86WW8 74 aa3.58□□□□□ -1.84
CTDSPL2-206ENST00000559175 PDE6GP18545 87 aa3.58□□□□□ -1.84
CTDSPL2-206ENST00000559175 ASH1LQ9NR48 2969 aaKnown RBP3.57□□□□□ -1.84
CTDSPL2-206ENST00000559175 TRGV4A0A0C4DH28 118 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms