RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 COL6A6A6NMZ7 2263 aa1.56□□□□□ -2.16
SKP1-209ENST00000522552 J3QKU1 62 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 PLXNC1O60486 1568 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 ERCC6L2Q5T890 1561 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 NHSQ6T4R5 1651 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 CFAP43Q8NDM7 1665 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 CICQ96RK0 1608 aaPredicted RBP1.55□□□□□ -2.16
SKP1-209ENST00000522552 ASH1LQ9NR48 2969 aaKnown RBP1.55□□□□□ -2.16
SKP1-209ENST00000522552 HIVEP2P31629 2446 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 ROS1P08922 2347 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 POLR1AO95602 1720 aaPredicted RBP1.55□□□□□ -2.16
SKP1-209ENST00000522552 LAMC1P11047 1609 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 SMIM5Q71RC9 77 aa1.55□□□□□ -2.16
SKP1-209ENST00000522552 FAM208BQ5VWN6 2430 aa1.54□□□□□ -2.16
SKP1-209ENST00000522552 ABCA10Q8WWZ4 1543 aa1.54□□□□□ -2.16
SKP1-209ENST00000522552 ANKRD50Q9ULJ7 1429 aa1.54□□□□□ -2.16
SKP1-209ENST00000522552 DOT1LQ8TEK3 1739 aa1.54□□□□□ -2.16
SKP1-209ENST00000522552 RALGAPBQ86X10 1494 aa1.53□□□□□ -2.16
SKP1-209ENST00000522552 LCE6AA0A183 80 aa1.53□□□□□ -2.16
SKP1-209ENST00000522552 FXYD6P3P58550 94 aa1.53□□□□□ -2.16
SKP1-209ENST00000522552 FMN2Q9NZ56 1722 aa1.52□□□□□ -2.17
SKP1-209ENST00000522552 ABCA6Q8N139 1617 aa1.52□□□□□ -2.17
SKP1-209ENST00000522552 EIF2AK4Q9P2K8 1649 aaKnown RBP1.52□□□□□ -2.17
SKP1-209ENST00000522552 TSC2P49815 1807 aa1.52□□□□□ -2.17
SKP1-209ENST00000522552 KIF1AQ12756 1690 aa1.52□□□□□ -2.17
SKP1-209ENST00000522552 COX7BP24311 80 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 KRTAP5-5Q701N2 237 aaPredicted RBP1.51□□□□□ -2.17
SKP1-209ENST00000522552 TULP4Q9NRJ4 1543 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 DOPEY2Q9Y3R5 2298 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 QSER1Q2KHR3 1735 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 RICTORQ6R327 1708 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
SKP1-209ENST00000522552 FAM103A1Q9BTL3 118 aaKnown RBP1.51□□□□□ -2.17
SKP1-209ENST00000522552 GLI2P10070 1586 aa1.5□□□□□ -2.17
SKP1-209ENST00000522552 OTOGLQ3ZCN5 2332 aa1.5□□□□□ -2.17
SKP1-209ENST00000522552 PLCE1Q9P212 2302 aa1.5□□□□□ -2.17
SKP1-209ENST00000522552 TNCP24821 2201 aa1.5□□□□□ -2.17
SKP1-209ENST00000522552 Q6ZSA8 131 aa1.5□□□□□ -2.17
SKP1-209ENST00000522552 LRRC37AA6NMS7 1700 aa1.49□□□□□ -2.17
SKP1-209ENST00000522552 NRAPQ86VF7 1730 aa1.49□□□□□ -2.17
SKP1-209ENST00000522552 NESP48681 1621 aa1.49□□□□□ -2.17
SKP1-209ENST00000522552 ALS2Q96Q42 1657 aa1.48□□□□□ -2.17
SKP1-209ENST00000522552 PRXQ9BXM0 1461 aa1.48□□□□□ -2.17
SKP1-209ENST00000522552 LINC01549A6NIU2 74 aa1.48□□□□□ -2.17
SKP1-209ENST00000522552 CACNA1EQ15878 2313 aa1.47□□□□□ -2.17
SKP1-209ENST00000522552 ANGP03950 147 aaKnown RBP1.47□□□□□ -2.17
SKP1-209ENST00000522552 ENHOQ6UWT2 76 aa1.47□□□□□ -2.17
SKP1-209ENST00000522552 ITSN2Q9NZM3 1697 aa1.47□□□□□ -2.17
SKP1-209ENST00000522552 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.45□□□□□ -2.183e-6■□□□□ 10.9
SKP1-209ENST00000522552 A0A0D9SFI3 127 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 I3L2K1 104 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 NDUFA4O00483 81 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 SPINK9Q5DT21 86 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 TP53AIP1Q9HCN2 124 aa1.45□□□□□ -2.18
SKP1-209ENST00000522552 CNOT1A5YKK6 2376 aaKnown RBP1.44□□□□□ -2.18
SKP1-209ENST00000522552 PIEZO2Q9H5I5 2752 aa1.44□□□□□ -2.18
SKP1-209ENST00000522552 RNF17Q9BXT8 1623 aaKnown RBP1.44□□□□□ -2.18
SKP1-209ENST00000522552 CPSF4LA6NMK7 179 aaKnown RBP1.44□□□□□ -2.18
SKP1-209ENST00000522552 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
SKP1-209ENST00000522552 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
SKP1-209ENST00000522552 SPTY2D1-AS1A0A0U1RR47 76 aa1.43□□□□□ -2.18
SKP1-209ENST00000522552 MROH2AA6NES4 1674 aa1.43□□□□□ -2.18
SKP1-209ENST00000522552 RPL38P63173 70 aaKnown RBP1.42□□□□□ -2.18
SKP1-209ENST00000522552 CRIPTQ9P021 101 aa1.42□□□□□ -2.18
SKP1-209ENST00000522552 MAST1Q9Y2H9 1570 aa1.42□□□□□ -2.18
SKP1-209ENST00000522552 ABCC6O95255 1503 aa1.42□□□□□ -2.18
SKP1-209ENST00000522552 ZNF462Q96JM2 2506 aa1.41□□□□□ -2.18
SKP1-209ENST00000522552 C2CD3Q4AC94 2353 aa1.41□□□□□ -2.18
SKP1-209ENST00000522552 PIGYQ3MUY2 71 aa1.41□□□□□ -2.18
SKP1-209ENST00000522552 DEFB123Q8N688 67 aa1.41□□□□□ -2.18
SKP1-209ENST00000522552 UBL5Q9BZL1 73 aa1.41□□□□□ -2.18
SKP1-209ENST00000522552 NWD1Q149M9 1564 aa1.4□□□□□ -2.18
SKP1-209ENST00000522552 CPS1P31327 1500 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 A0A0D9SG42 100 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 K7EQZ3 153 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 ARL14EPLP0DKL9 152 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 CNFNQ9BYD5 112 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 CLASP1Q7Z460 1538 aa1.39□□□□□ -2.19
SKP1-209ENST00000522552 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
SKP1-209ENST00000522552 PTPRZ1P23471 2315 aaPredicted RBP1.39□□□□□ -2.19
SKP1-209ENST00000522552 KRTAP10-4P60372 401 aaPredicted RBP1.39□□□□□ -2.19
SKP1-209ENST00000522552 TJP1Q07157 1748 aa1.38□□□□□ -2.19
SKP1-209ENST00000522552 USF3Q68DE3 2245 aa1.38□□□□□ -2.19
SKP1-209ENST00000522552 CACNA1HO95180 2353 aa1.38□□□□□ -2.19
SKP1-209ENST00000522552 BPTFQ12830 3046 aa1.38□□□□□ -2.19
SKP1-209ENST00000522552 KRTAP21-3Q3LHN1 58 aa1.38□□□□□ -2.19
SKP1-209ENST00000522552 LY75O60449 1722 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 FXYD6Q9H0Q3 95 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 SPTBN2O15020 2390 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 SYCP2Q9BX26 1530 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 CROCC2H7BZ55 1655 aa1.37□□□□□ -2.19
SKP1-209ENST00000522552 I3L3M4 83 aa1.36□□□□□ -2.19
SKP1-209ENST00000522552 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
SKP1-209ENST00000522552 UGGT1Q9NYU2 1555 aa1.36□□□□□ -2.19
SKP1-209ENST00000522552 PTPRQQ9UMZ3 2332 aa1.36□□□□□ -2.19
SKP1-209ENST00000522552 DDX60LQ5H9U9 1706 aaKnown RBP1.36□□□□□ -2.19
SKP1-209ENST00000522552 FCER1GP30273 86 aa1.35□□□□□ -2.19
SKP1-209ENST00000522552 KCNQ1DNQ9H478 68 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms