RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ARMS2P0C7Q2 107 aa-0.09□□□□□ -2.42
CHD1-203ENST00000505657 APLNQ9ULZ1 77 aa-0.09□□□□□ -2.42
CHD1-203ENST00000505657 BCORQ6W2J9 1755 aa-0.09□□□□□ -2.42
CHD1-203ENST00000505657 UBR3Q6ZT12 1888 aa-0.1□□□□□ -2.42
CHD1-203ENST00000505657 EDC4Q6P2E9 1401 aaKnown RBP-0.1□□□□□ -2.43
CHD1-203ENST00000505657 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.43
CHD1-203ENST00000505657 EP300Q09472 2414 aaPredicted RBP-0.1□□□□□ -2.43
CHD1-203ENST00000505657 UQCRHLA0A096LP55 91 aa-0.1□□□□□ -2.43
CHD1-203ENST00000505657 SLIT1O75093 1534 aa-0.1□□□□□ -2.43
CHD1-203ENST00000505657 ABCC2Q92887 1545 aa-0.1□□□□□ -2.43
CHD1-203ENST00000505657 CPSF4LA6NMK7 179 aaKnown RBP-0.11□□□□□ -2.43
CHD1-203ENST00000505657 ETDBQ3ZM63 59 aa-0.11□□□□□ -2.43
CHD1-203ENST00000505657 CCDC141Q6ZP82 1450 aa-0.11□□□□□ -2.43
CHD1-203ENST00000505657 TENM2Q9NT68 2774 aa-0.11□□□□□ -2.43
CHD1-203ENST00000505657 FLNBO75369 2602 aaKnown RBP-0.12□□□□□ -2.43
CHD1-203ENST00000505657 F8WEM9 126 aa-0.12□□□□□ -2.43
CHD1-203ENST00000505657 PSENENQ9NZ42 101 aa-0.12□□□□□ -2.43
CHD1-203ENST00000505657 PRKDCP78527 4128 aaKnown RBP-0.12□□□□□ -2.43
CHD1-203ENST00000505657 NKTRP30414 1462 aaKnown RBP-0.12□□□□□ -2.43
CHD1-203ENST00000505657 LRP2P98164 4655 aa-0.12□□□□□ -2.43
CHD1-203ENST00000505657 VPS8Q8N3P4 1428 aa-0.13□□□□□ -2.43
CHD1-203ENST00000505657 QSER1Q2KHR3 1735 aa-0.13□□□□□ -2.43
CHD1-203ENST00000505657 ZNF720Q7Z2F6 126 aa-0.13□□□□□ -2.43
CHD1-203ENST00000505657 TRBV7-7A0A0K0K1E9 115 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 D6R8Y8 96 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 I3L3M4 83 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 LEPROTL1O95214 131 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 S100A8P05109 93 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 MUSTN1Q8IVN3 82 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 SNHG12Q9BXW3 62 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 MYO3AQ8NEV4 1616 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 ACANP16112 2415 aa-0.14□□□□□ -2.43
CHD1-203ENST00000505657 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
CHD1-203ENST00000505657 SAMD9Q5K651 1589 aa-0.15□□□□□ -2.43
CHD1-203ENST00000505657 STAB1Q9NY15 2570 aa-0.15□□□□□ -2.43
CHD1-203ENST00000505657 PKIAP61925 76 aa-0.15□□□□□ -2.43
CHD1-203ENST00000505657 DSTQ03001 7570 aaKnown RBP-0.15□□□□□ -2.43
CHD1-203ENST00000505657 KNL1Q8NG31 2342 aa-0.16□□□□□ -2.43
CHD1-203ENST00000505657 H1FX-AS1Q4G0G2 97 aa-0.16□□□□□ -2.44
CHD1-203ENST00000505657 CNOT1A5YKK6 2376 aaKnown RBP-0.16□□□□□ -2.44
CHD1-203ENST00000505657 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.16□□□□□ -2.44
CHD1-203ENST00000505657 RGPD1P0DJD0 1748 aa-0.16□□□□□ -2.44
CHD1-203ENST00000505657 SUPT6HQ7KZ85 1726 aaKnown RBP-0.16□□□□□ -2.44
CHD1-203ENST00000505657 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.16□□□□□ -2.44
CHD1-203ENST00000505657 ALKQ9UM73 1620 aa-0.16□□□□□ -2.44
CHD1-203ENST00000505657 COL6A3P12111 3177 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 IGLC2P0DOY2 106 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 IGLC3P0DOY3 106 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 HIGD1BQ9P298 99 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 FANCAO15360 1455 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 ATP10BO94823 1461 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 IQSEC2Q5JU85 1478 aa-0.17□□□□□ -2.44
CHD1-203ENST00000505657 EPRSP07814 1512 aaKnown RBP-0.18□□□□□ -2.44
CHD1-203ENST00000505657 M0R2T5 61 aa-0.18□□□□□ -2.44
CHD1-203ENST00000505657 HMGN3Q15651 99 aa-0.18□□□□□ -2.44
CHD1-203ENST00000505657 DEFB112Q30KQ8 113 aa-0.18□□□□□ -2.44
CHD1-203ENST00000505657 SPTY2D1-AS1A0A0U1RR47 76 aa-0.19□□□□□ -2.44
CHD1-203ENST00000505657 MRPL34Q9BQ48 92 aaKnown RBP-0.19□□□□□ -2.44
CHD1-203ENST00000505657 C20orf78Q9BR46 151 aa-0.19□□□□□ -2.44
CHD1-203ENST00000505657 REV3LO60673 3130 aa-0.19□□□□□ -2.44
CHD1-203ENST00000505657 ALKAL2Q6UX46 152 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 PPLO60437 1756 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 LTN1O94822 1766 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 CCNB3Q8WWL7 1395 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 MUC12Q9UKN1 5478 aa-0.2□□□□□ -2.44
CHD1-203ENST00000505657 TIAM2Q8IVF5 1701 aa-0.21□□□□□ -2.44
CHD1-203ENST00000505657 LELP1Q5T871 98 aa-0.21□□□□□ -2.44
CHD1-203ENST00000505657 HEPN1Q6WQI6 88 aa-0.21□□□□□ -2.44
CHD1-203ENST00000505657 UBE2D4Q9Y2X8 147 aa-0.21□□□□□ -2.44
CHD1-203ENST00000505657 GYPAP02724 150 aa-0.22□□□□□ -2.44
CHD1-203ENST00000505657 PEA15Q15121 130 aa-0.22□□□□□ -2.44
CHD1-203ENST00000505657 PREX1Q8TCU6 1659 aa-0.22□□□□□ -2.44
CHD1-203ENST00000505657 LRRC7Q96NW7 1537 aa-0.23□□□□□ -2.45
CHD1-203ENST00000505657 NEBP20929 6669 aa-0.23□□□□□ -2.45
CHD1-203ENST00000505657 POLR1AO95602 1720 aaPredicted RBP-0.23□□□□□ -2.45
CHD1-203ENST00000505657 SPRR2BP35325 72 aa-0.23□□□□□ -2.45
CHD1-203ENST00000505657 Q9H521 79 aa-0.23□□□□□ -2.45
CHD1-203ENST00000505657 TTC37Q6PGP7 1564 aa-0.23□□□□□ -2.45
CHD1-203ENST00000505657 TMEM131LA2VDJ0 1609 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 NBASA2RRP1 2371 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 C4AP0C0L4 1744 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 C4BP0C0L5 1744 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
CHD1-203ENST00000505657 CCL22O00626 93 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 HMGN2P05204 90 aaKnown RBP-0.24□□□□□ -2.45
CHD1-203ENST00000505657 SMIM11AP58511 58 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 PCNX1Q96RV3 2341 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 TROQ12816 1431 aaPredicted RBP-0.24□□□□□ -2.45
CHD1-203ENST00000505657 CEP162Q5TB80 1403 aa-0.24□□□□□ -2.45
CHD1-203ENST00000505657 NBEAL1Q6ZS30 2694 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 DEFB135Q30KP9 77 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 CLIP1P30622 1438 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 NEXMIFQ5QGS0 1516 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 TRANK1O15050 2925 aa-0.25□□□□□ -2.45
CHD1-203ENST00000505657 MAGI2Q86UL8 1455 aa-0.26□□□□□ -2.45
CHD1-203ENST00000505657 NMSQ5H8A3 153 aa-0.26□□□□□ -2.45
CHD1-203ENST00000505657 PDE4DIPQ5VU43 2346 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms