RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 PKHD1L1Q86WI1 4243 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 KNDC1Q76NI1 1749 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 SPTBN4Q9H254 2564 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 A0A0G2JND7 137 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 ABCC5O15440 1437 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 MYO18BQ8IUG5 2567 aa-0.57□□□□□ -2.5
ATP13A3-209ENST00000492983 CELSR3Q9NYQ7 3312 aa-0.58□□□□□ -2.5
ATP13A3-209ENST00000492983 HTTP42858 3142 aa-0.58□□□□□ -2.5
ATP13A3-209ENST00000492983 GNGT2O14610 69 aa-0.58□□□□□ -2.5
ATP13A3-209ENST00000492983 SPRR2BP35325 72 aa-0.58□□□□□ -2.5
ATP13A3-209ENST00000492983 ASIPP42127 132 aa-0.58□□□□□ -2.5
ATP13A3-209ENST00000492983 MUC17Q685J3 4493 aa-0.59□□□□□ -2.5
ATP13A3-209ENST00000492983 CPSF4LA6NMK7 179 aaKnown RBP-0.59□□□□□ -2.5
ATP13A3-209ENST00000492983 LAMA3Q16787 3333 aa-0.59□□□□□ -2.5
ATP13A3-209ENST00000492983 CNOT1A5YKK6 2376 aaKnown RBP-0.6□□□□□ -2.5
ATP13A3-209ENST00000492983 M0R2T5 61 aa-0.6□□□□□ -2.51
ATP13A3-209ENST00000492983 C6orf201Q7Z4U5 140 aa-0.6□□□□□ -2.51
ATP13A3-209ENST00000492983 DEFB107AQ8IZN7 70 aa-0.6□□□□□ -2.51
ATP13A3-209ENST00000492983 CACFD1Q9UGQ2 172 aa-0.6□□□□□ -2.51
ATP13A3-209ENST00000492983 AKAP13Q12802 2813 aa-0.6□□□□□ -2.51
ATP13A3-209ENST00000492983 PCNX1Q96RV3 2341 aa-0.61□□□□□ -2.51
ATP13A3-209ENST00000492983 PSMG4Q5JS54 123 aa-0.61□□□□□ -2.51
ATP13A3-209ENST00000492983 CRIPTQ9P021 101 aa-0.61□□□□□ -2.51
ATP13A3-209ENST00000492983 TACC2O95359 2948 aa-0.61□□□□□ -2.51
ATP13A3-209ENST00000492983 DNAH2Q9P225 4427 aa-0.61□□□□□ -2.51
ATP13A3-209ENST00000492983 ZFYVE16Q7Z3T8 1539 aa-0.62□□□□□ -2.51
ATP13A3-209ENST00000492983 H3BQF6 201 aa-0.62□□□□□ -2.51
ATP13A3-209ENST00000492983 IQSEC2Q5JU85 1478 aa-0.62□□□□□ -2.51
ATP13A3-209ENST00000492983 TEX15Q9BXT5 2789 aa-0.62□□□□□ -2.51
ATP13A3-209ENST00000492983 CUBNO60494 3623 aa-0.63□□□□□ -2.51
ATP13A3-209ENST00000492983 VPS13DQ5THJ4 4388 aa-0.63□□□□□ -2.51
ATP13A3-209ENST00000492983 VPS13BQ7Z7G8 4022 aa-0.63□□□□□ -2.51
ATP13A3-209ENST00000492983 GNGT1P63211 74 aa-0.63□□□□□ -2.51
ATP13A3-209ENST00000492983 PMCHL1Q16048 86 aa-0.63□□□□□ -2.51
ATP13A3-209ENST00000492983 LAMA1P25391 3075 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 CCDC141Q6ZP82 1450 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 NDUFC1O43677 76 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 DNHD1Q96M86 4753 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 COL6A5A8TX70 2615 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 AKAP9Q99996 3911 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 ITPR1Q14643 2758 aa-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 RIF1Q5UIP0 2472 aaKnown RBP-0.64□□□□□ -2.51
ATP13A3-209ENST00000492983 PLECQ15149 4684 aaKnown RBP-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 MLH3Q9UHC1 1453 aa-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 TRBV25-1A0A075B6N4 114 aa-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 H0Y9P7 68 aa-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 PMCHL2Q9BQD1 86 aa-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 TARBP1Q13395 1621 aaKnown RBP-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 PKD1P98161 4303 aa-0.65□□□□□ -2.51
ATP13A3-209ENST00000492983 MGAM2Q2M2H8 2515 aa-0.66□□□□□ -2.51
ATP13A3-209ENST00000492983 ANKRD11Q6UB99 2663 aaPredicted RBP-0.66□□□□□ -2.51
ATP13A3-209ENST00000492983 TMEM218A2RU14 115 aa-0.66□□□□□ -2.52
ATP13A3-209ENST00000492983 S100PP25815 95 aa-0.66□□□□□ -2.52
ATP13A3-209ENST00000492983 S100A10P60903 97 aa-0.66□□□□□ -2.52
ATP13A3-209ENST00000492983 AP4S1Q9Y587 144 aa-0.66□□□□□ -2.52
ATP13A3-209ENST00000492983 NCOA3Q9Y6Q9 1424 aa-0.66□□□□□ -2.52
ATP13A3-209ENST00000492983 MON2Q7Z3U7 1717 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 ANK3Q12955 4377 aaKnown RBP-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.67□□□□□ -2.522e-6■■■■□ 24
ATP13A3-209ENST00000492983 CMYA5Q8N3K9 4069 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 SHPRHQ149N8 1683 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 I3L3M4 83 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 SPRR2EP22531 72 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 KRTAP6-2Q3LI66 62 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 SRCAPQ6ZRS2 3230 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 LYSTQ99698 3801 aa-0.67□□□□□ -2.52
ATP13A3-209ENST00000492983 MTORP42345 2549 aa-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 ABCA13Q86UQ4 5058 aa-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 UQCRHP07919 91 aa-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 EDC4Q6P2E9 1401 aaKnown RBP-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 COL14A1Q05707 1796 aaKnown RBP-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 NKTRP30414 1462 aaKnown RBP-0.68□□□□□ -2.52
ATP13A3-209ENST00000492983 MT-ATP8P03928 68 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 H1FX-AS1Q4G0G2 97 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 TRGV9Q99603 122 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 A0A0C4DFX4 3053 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 NBEAQ8NFP9 2946 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 RELNP78509 3460 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 EYSQ5T1H1 3165 aa-0.69□□□□□ -2.52
ATP13A3-209ENST00000492983 CCDC168Q8NDH2 2452 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 GCN1Q92616 2671 aaKnown RBP-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 LRRK2Q5S007 2527 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 DNAH9Q9NYC9 4486 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 SPG11Q96JI7 2443 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 SPRR2AP35326 72 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 C14orf144Q96I85 54 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 PRDM15P57071 1507 aaPredicted RBP-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 NBASA2RRP1 2371 aa-0.7□□□□□ -2.52
ATP13A3-209ENST00000492983 LRRC37AA6NMS7 1700 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 H7BZZ5 65 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 TCEAL7Q9BRU2 100 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 ITPR2Q14571 2701 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 SACSQ9NZJ4 4579 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 ANKRD36BQ8N2N9 1353 aa-0.71□□□□□ -2.52
ATP13A3-209ENST00000492983 C5P01031 1676 aa-0.72□□□□□ -2.52
ATP13A3-209ENST00000492983 KALRNO60229 2985 aa-0.72□□□□□ -2.52
ATP13A3-209ENST00000492983 ACACAQ13085 2346 aa-0.72□□□□□ -2.52
ATP13A3-209ENST00000492983 CEP295Q9C0D2 2601 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms