RNA–Protein interactions for RNA: ENST00000492983.1

ATP13A3-209, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-209ENST00000492983 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
ATP13A3-209ENST00000492983 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
ATP13A3-209ENST00000492983 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
ATP13A3-209ENST00000492983 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
ATP13A3-209ENST00000492983 FOXD1Q16676 465 aa20.7■□□□□ 0.9
ATP13A3-209ENST00000492983 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
ATP13A3-209ENST00000492983 MSH5O43196 834 aa19.49■□□□□ 0.71
ATP13A3-209ENST00000492983 PIAS4Q8N2W9 510 aaPredicted RBP19.15■□□□□ 0.66
ATP13A3-209ENST00000492983 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
ATP13A3-209ENST00000492983 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
ATP13A3-209ENST00000492983 ADRA2BP18089 450 aa18.88■□□□□ 0.61
ATP13A3-209ENST00000492983 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
ATP13A3-209ENST00000492983 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
ATP13A3-209ENST00000492983 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
ATP13A3-209ENST00000492983 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
ATP13A3-209ENST00000492983 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
ATP13A3-209ENST00000492983 RNF39Q9H2S5 420 aa16.65■□□□□ 0.26
ATP13A3-209ENST00000492983 PPP4R3CPQ6ZMV5 832 aa16.64■□□□□ 0.25
ATP13A3-209ENST00000492983 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
ATP13A3-209ENST00000492983 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
ATP13A3-209ENST00000492983 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
ATP13A3-209ENST00000492983 C1QBPQ07021 282 aaKnown RBP16.34■□□□□ 0.21
ATP13A3-209ENST00000492983 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
ATP13A3-209ENST00000492983 NCBP3Q53F19 620 aaKnown RBP15.79■□□□□ 0.12
ATP13A3-209ENST00000492983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
ATP13A3-209ENST00000492983 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
ATP13A3-209ENST00000492983 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
ATP13A3-209ENST00000492983 DSG3P32926 999 aa15.42■□□□□ 0.06
ATP13A3-209ENST00000492983 POTEHQ6S545 545 aa15.41■□□□□ 0.06
ATP13A3-209ENST00000492983 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
ATP13A3-209ENST00000492983 CAPN15O75808 1086 aa15.28■□□□□ 0.04
ATP13A3-209ENST00000492983 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
ATP13A3-209ENST00000492983 KCNA4P22459 653 aa14.96□□□□□ -0.01
ATP13A3-209ENST00000492983 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
ATP13A3-209ENST00000492983 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
ATP13A3-209ENST00000492983 ABCB7O75027 752 aa14.92□□□□□ -0.02
ATP13A3-209ENST00000492983 APLP2Q06481 763 aa14.9□□□□□ -0.02
ATP13A3-209ENST00000492983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.81□□□□□ -0.04
ATP13A3-209ENST00000492983 HNRNPUL2Q1KMD3 747 aaKnown RBP14.81□□□□□ -0.04
ATP13A3-209ENST00000492983 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
ATP13A3-209ENST00000492983 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
ATP13A3-209ENST00000492983 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
ATP13A3-209ENST00000492983 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
ATP13A3-209ENST00000492983 POLA2Q14181 598 aa14.46□□□□□ -0.09
ATP13A3-209ENST00000492983 AKT1S1Q96B36 256 aa14.26□□□□□ -0.13
ATP13A3-209ENST00000492983 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
ATP13A3-209ENST00000492983 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
ATP13A3-209ENST00000492983 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
ATP13A3-209ENST00000492983 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
ATP13A3-209ENST00000492983 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
ATP13A3-209ENST00000492983 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
ATP13A3-209ENST00000492983 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
ATP13A3-209ENST00000492983 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
ATP13A3-209ENST00000492983 PITPNM1O00562 1244 aa14□□□□□ -0.17
ATP13A3-209ENST00000492983 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
ATP13A3-209ENST00000492983 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
ATP13A3-209ENST00000492983 HAX1O00165 279 aa13.87□□□□□ -0.19
ATP13A3-209ENST00000492983 ZBTB22O15209 634 aa13.82□□□□□ -0.2
ATP13A3-209ENST00000492983 EVX2Q03828 476 aa13.81□□□□□ -0.2
ATP13A3-209ENST00000492983 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
ATP13A3-209ENST00000492983 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
ATP13A3-209ENST00000492983 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
ATP13A3-209ENST00000492983 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
ATP13A3-209ENST00000492983 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
ATP13A3-209ENST00000492983 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
ATP13A3-209ENST00000492983 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
ATP13A3-209ENST00000492983 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
ATP13A3-209ENST00000492983 FBLN2P98095 1184 aa13.56□□□□□ -0.24
ATP13A3-209ENST00000492983 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
ATP13A3-209ENST00000492983 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
ATP13A3-209ENST00000492983 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
ATP13A3-209ENST00000492983 GABBR2O75899 941 aa13.43□□□□□ -0.26
ATP13A3-209ENST00000492983 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
ATP13A3-209ENST00000492983 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
ATP13A3-209ENST00000492983 LHX8Q68G74 356 aa13.32□□□□□ -0.28
ATP13A3-209ENST00000492983 POTEIP0CG38 1075 aa13.22□□□□□ -0.29
ATP13A3-209ENST00000492983 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
ATP13A3-209ENST00000492983 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
ATP13A3-209ENST00000492983 CD44P16070 742 aaKnown RBP13.12□□□□□ -0.31
ATP13A3-209ENST00000492983 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
ATP13A3-209ENST00000492983 CLCN6P51797 869 aa13.05□□□□□ -0.32
ATP13A3-209ENST00000492983 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
ATP13A3-209ENST00000492983 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
ATP13A3-209ENST00000492983 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
ATP13A3-209ENST00000492983 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
ATP13A3-209ENST00000492983 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
ATP13A3-209ENST00000492983 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
ATP13A3-209ENST00000492983 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
ATP13A3-209ENST00000492983 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
ATP13A3-209ENST00000492983 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
ATP13A3-209ENST00000492983 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
ATP13A3-209ENST00000492983 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
ATP13A3-209ENST00000492983 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
ATP13A3-209ENST00000492983 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
ATP13A3-209ENST00000492983 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
ATP13A3-209ENST00000492983 POTEMA6NI47 508 aa12.56□□□□□ -0.4
ATP13A3-209ENST00000492983 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
ATP13A3-209ENST00000492983 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
ATP13A3-209ENST00000492983 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
ATP13A3-209ENST00000492983 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms