RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MAGI3Q5TCQ9 1506 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 UGGT2Q9NYU1 1516 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 TIAM1Q13009 1591 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 Q5VSD8 79 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 SMIM5Q71RC9 77 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 GNG13Q9P2W3 67 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 KIF20BQ96Q89 1820 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 EFCAB5A4FU69 1503 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 DUOX2Q9NRD8 1548 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 LRRIQ1Q96JM4 1722 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 PIEZO1Q92508 2521 aa0.58□□□□□ -2.32
HMGB1P36-201ENST00000487709 PAPPA2Q9BXP8 1791 aa0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 SCN11AQ9UI33 1791 aa0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 CCDC180Q9P1Z9 1646 aa0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 BIVM-ERCC5R4GMW8 1640 aa0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 ZC3H13Q5T200 1668 aaKnown RBP0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 CPSF4LA6NMK7 179 aaKnown RBP0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 ABCA8O94911 1581 aa0.57□□□□□ -2.32
HMGB1P36-201ENST00000487709 POLQO75417 2590 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 PIEZO2Q9H5I5 2752 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 CCL22O00626 93 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 IFI6P09912 130 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 HMGA1P17096 107 aaKnown RBP0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 PLXNB2O15031 1838 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 BDP1A6H8Y1 2624 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 THOC2Q8NI27 1593 aaKnown RBP0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 MYO7BQ6PIF6 2116 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 IQGAP3Q86VI3 1631 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 CADP27708 2225 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 ASXL3Q9C0F0 2248 aa0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 PPRC1Q5VV67 1664 aaKnown RBP0.56□□□□□ -2.32
HMGB1P36-201ENST00000487709 MYO5CQ9NQX4 1742 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 A0A087WWC5 75 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 H3BVH4 76 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 NREPQ16612 68 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 Q5BKY6 102 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 HEPN1Q6WQI6 88 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 MRPL34Q9BQ48 92 aaKnown RBP0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 PIK3C2BO00750 1634 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 PKD1L3Q7Z443 1732 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 LTN1O94822 1766 aa0.55□□□□□ -2.32
HMGB1P36-201ENST00000487709 MYO7AQ13402 2215 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 LMTK2Q8IWU2 1503 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 MYH4Q9Y623 1939 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 USP32Q8NFA0 1604 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 TTC28Q96AY4 2481 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 PLCH1Q4KWH8 1693 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 SFTA3P0C7M3 94 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 SPRR1BP22528 89 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 SPRR1AP35321 89 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 ATXN8Q156A1 80 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 RGPD8O14715 1765 aaPredicted RBP0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 RGPD5Q99666 1765 aa0.54□□□□□ -2.32
HMGB1P36-201ENST00000487709 PLXNC1O60486 1568 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 CEP170BQ9Y4F5 1589 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 NAV2Q8IVL1 2488 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 SPINK4O60575 86 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 SPINK1P00995 79 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 FXYD6Q9H0Q3 95 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 ANKRD50Q9ULJ7 1429 aa0.53□□□□□ -2.32
HMGB1P36-201ENST00000487709 RALGAPBQ86X10 1494 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 PRXQ9BXM0 1461 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 ASXL1Q8IXJ9 1541 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 ABCA10Q8WWZ4 1543 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 SYCP2Q9BX26 1530 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 ABCA9Q8IUA7 1624 aa0.53□□□□□ -2.33
HMGB1P36-201ENST00000487709 DEFB109BQ30KR1 87 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 UBL5Q9BZL1 73 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 APLNQ9ULZ1 77 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 HILPDAQ9Y5L2 63 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 PREX2Q70Z35 1606 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 MADDQ8WXG6 1647 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 CICQ96RK0 1608 aaPredicted RBP0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 CFAP43Q8NDM7 1665 aa0.52□□□□□ -2.33
HMGB1P36-201ENST00000487709 LCE6AA0A183 80 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 MRPL33O75394 65 aaKnown RBP0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 PRH1P02810 166 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 RGPD1P0DJD0 1748 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 SERF2P84101 59 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 DIP2AQ14689 1571 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 ITSN1Q15811 1721 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 CDC42BPGQ6DT37 1551 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 NHSQ6T4R5 1651 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 CLASP1Q7Z460 1538 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 RNF17Q9BXT8 1623 aaKnown RBP0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 EIF2AK4Q9P2K8 1649 aaKnown RBP0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 ABCA12Q86UK0 2595 aa0.51□□□□□ -2.33
HMGB1P36-201ENST00000487709 PREX1Q8TCU6 1659 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 ABCA6Q8N139 1617 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 CPS1P31327 1500 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 ZNF292O60281 2723 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 NDUFA4O00483 81 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 SMR3AQ99954 134 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 CDKN2A-AS1Q9UH64 79 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 DNAJC13O75165 2243 aa0.5□□□□□ -2.33
HMGB1P36-201ENST00000487709 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms