RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 HFM1A2PYH4 1435 aa0.89□□□□□ -2.27
HMGB1P9-201ENST00000429856 TENM1Q9UKZ4 2725 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 MKI67P46013 3256 aaKnown RBP0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 C5orf42Q9H799 3197 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 SHPRHQ149N8 1683 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 FAM208AQ9UK61 1670 aaKnown RBP0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 ASXL3Q9C0F0 2248 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 CELSR3Q9NYQ7 3312 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 C7orf77A4D0Y5 90 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 COX17Q14061 63 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 FDCSPQ8NFU4 85 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 XRN1Q8IZH2 1706 aaKnown RBP0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 PCLOQ9Y6V0 5065 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 TMEM131LA2VDJ0 1609 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 JMJD1CQ15652 2540 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 NEXMIFQ5QGS0 1516 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 ASXL1Q8IXJ9 1541 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 KDM3BQ7LBC6 1761 aa0.88□□□□□ -2.27
HMGB1P9-201ENST00000429856 MYO9AB2RTY4 2548 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 KIF20BQ96Q89 1820 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 LRRC37A2A6NM11 1700 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 RGPD1P0DJD0 1748 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 FMN2Q9NZ56 1722 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 FBN2P35556 2912 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 USP32Q8NFA0 1604 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 CFAP54Q96N23 3096 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 F8WEM9 126 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 BCE1O60756 84 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 ETDBQ3ZM63 59 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 PSENENQ9NZ42 101 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 RABAC1Q9UI14 185 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 ABCC6O95255 1503 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 TULP4Q9NRJ4 1543 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 REV3LO60673 3130 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 BPTFQ12830 3046 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 ANKARQ7Z5J8 1434 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 PLCH1Q4KWH8 1693 aa0.87□□□□□ -2.27
HMGB1P9-201ENST00000429856 PARP4Q9UKK3 1724 aaKnown RBP0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 NCOR1O75376 2440 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 VWFP04275 2813 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 COL14A1Q05707 1796 aaKnown RBP0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 PCNX1Q96RV3 2341 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 USP34Q70CQ2 3546 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 ALS2Q96Q42 1657 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 A0A087WVE0 104 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 ARMS2P0C7Q2 107 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 FXYD6P3P58550 94 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 WFDC2Q14508 124 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 NMSQ5H8A3 153 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 ZNF720Q7Z2F6 126 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 S100A13Q99584 98 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 SPCS1Q9Y6A9 102 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 TPRP12270 2363 aaKnown RBP0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 NRXN3Q9Y4C0 1643 aa0.86□□□□□ -2.27
HMGB1P9-201ENST00000429856 ANKRD36A6QL64 1941 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 SMIM11AP58511 58 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 HAMPP81172 84 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 Q6JHZ5 121 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 ALKAL2Q6UX46 152 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 NRAPQ86VF7 1730 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 PROK2Q9HC23 129 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 LINC00846Q9NV44 126 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 ANKHD1Q8IWZ3 2542 aaKnown RBP0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 LTN1O94822 1766 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 C1orf167Q5SNV9 1468 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 BOD1L1Q8NFC6 3051 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 ATRQ13535 2644 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 BRCA2P51587 3418 aa0.85□□□□□ -2.27
HMGB1P9-201ENST00000429856 SPEGQ15772 3267 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 LRRK2Q5S007 2527 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 DOT1LQ8TEK3 1739 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 RYR3Q15413 4870 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 STAB1Q9NY15 2570 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 HTTP42858 3142 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 IGSF10Q6WRI0 2623 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 SPINK9Q5DT21 86 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 C10orf113Q5VZT2 155 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 TMEM263Q8WUH6 116 aaKnown RBP0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 ST20Q9HBF5 79 aa0.84□□□□□ -2.27
HMGB1P9-201ENST00000429856 ACACBO00763 2458 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 SPTAN1Q13813 2472 aaKnown RBP0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 MEGF8Q7Z7M0 2845 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 DNHD1Q96M86 4753 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 CFAP46Q8IYW2 2715 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 NHSQ6T4R5 1651 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 CRYBG1Q9Y4K1 1723 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 AHCTF1Q8WYP5 2266 aa0.84□□□□□ -2.28
HMGB1P9-201ENST00000429856 MAP1BP46821 2468 aaKnown RBP0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 CNOT1A5YKK6 2376 aaKnown RBP0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 POLQO75417 2590 aa0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 LRP6O75581 1613 aa0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 CENPFP49454 3210 aa0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 PIN1P1O15428 100 aa0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 LEPROTL1O95214 131 aa0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 HMGN2P05204 90 aaKnown RBP0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 SNRPFP62306 86 aaKnown RBP0.83□□□□□ -2.28
HMGB1P9-201ENST00000429856 HMGN3Q15651 99 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms