RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 Q6ZVQ6 151 aa10.61□□□□□ -0.71
LIMK2-203ENST00000340552 STHQ8IWL8 128 aa10.61□□□□□ -0.71
LIMK2-203ENST00000340552 MPLKIPQ8TAP9 179 aa10.61□□□□□ -0.71
LIMK2-203ENST00000340552 TRBV7-4A0A0J9YYF1 115 aa10.6□□□□□ -0.71
LIMK2-203ENST00000340552 IGLV1-51P01701 117 aa10.6□□□□□ -0.71
LIMK2-203ENST00000340552 JMJD1CQ15652 2540 aa10.6□□□□□ -0.71
LIMK2-203ENST00000340552 NDUFC1O43677 76 aa10.6□□□□□ -0.71
LIMK2-203ENST00000340552 IGHV3OR16-9A0A0B4J2B5 98 aa10.6□□□□□ -0.71
LIMK2-203ENST00000340552 INSP01308 110 aa10.59□□□□□ -0.71
LIMK2-203ENST00000340552 MIFP14174 115 aa10.59□□□□□ -0.71
LIMK2-203ENST00000340552 ATP5EP56381 51 aaPredicted RBP10.59□□□□□ -0.71
LIMK2-203ENST00000340552 Q8N3U1 123 aa10.59□□□□□ -0.71
LIMK2-203ENST00000340552 TRGV1A0A0A0MS02 117 aa10.59□□□□□ -0.71
LIMK2-203ENST00000340552 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
LIMK2-203ENST00000340552 FLNBO75369 2602 aaKnown RBP10.57□□□□□ -0.72
LIMK2-203ENST00000340552 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
LIMK2-203ENST00000340552 CMC4P56277 68 aaPredicted RBP10.56□□□□□ -0.72
LIMK2-203ENST00000340552 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
LIMK2-203ENST00000340552 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
LIMK2-203ENST00000340552 A0A087WZ39 114 aa10.55□□□□□ -0.72
LIMK2-203ENST00000340552 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
LIMK2-203ENST00000340552 CXCL6P80162 114 aa10.54□□□□□ -0.72
LIMK2-203ENST00000340552 F8P00451 2351 aa10.54□□□□□ -0.72
LIMK2-203ENST00000340552 SCXQ7RTU7 201 aa10.54□□□□□ -0.72
LIMK2-203ENST00000340552 C19orf73Q9NVV2 129 aa10.54□□□□□ -0.72
LIMK2-203ENST00000340552 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 TMEM254Q8TBM7 123 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 NREPQ16612 68 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
LIMK2-203ENST00000340552 ZNF561-AS1K7EIQ3 104 aa10.52□□□□□ -0.73
LIMK2-203ENST00000340552 C6orf223Q8N319 242 aa10.52□□□□□ -0.73
LIMK2-203ENST00000340552 SPATA3Q8NHX4 192 aa10.52□□□□□ -0.73
LIMK2-203ENST00000340552 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
LIMK2-203ENST00000340552 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
LIMK2-203ENST00000340552 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
LIMK2-203ENST00000340552 ATRQ13535 2644 aa10.48□□□□□ -0.73
LIMK2-203ENST00000340552 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
LIMK2-203ENST00000340552 ESRGQ1W209 222 aa10.48□□□□□ -0.73
LIMK2-203ENST00000340552 Q8NDZ9 215 aa10.47□□□□□ -0.73
LIMK2-203ENST00000340552 VWFP04275 2813 aa10.47□□□□□ -0.73
LIMK2-203ENST00000340552 BPY2O14599 106 aa10.47□□□□□ -0.73
LIMK2-203ENST00000340552 C9orf66Q5T8R8 295 aa10.46□□□□□ -0.74
LIMK2-203ENST00000340552 TEP1Q99973 2627 aaKnown RBP10.46□□□□□ -0.74
LIMK2-203ENST00000340552 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
LIMK2-203ENST00000340552 Q6ZTC4 211 aa10.45□□□□□ -0.74
LIMK2-203ENST00000340552 PRYO14603 147 aa10.44□□□□□ -0.74
LIMK2-203ENST00000340552 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
LIMK2-203ENST00000340552 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
LIMK2-203ENST00000340552 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
LIMK2-203ENST00000340552 FUSP35637 526 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIMK2-203ENST00000340552 Q8IZM0 81 aa10.43□□□□□ -0.74
LIMK2-203ENST00000340552 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
LIMK2-203ENST00000340552 TRBV6-8A0A0A6YYG3 113 aa10.42□□□□□ -0.74
LIMK2-203ENST00000340552 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
LIMK2-203ENST00000340552 Q6ZQY7 126 aa10.42□□□□□ -0.74
LIMK2-203ENST00000340552 PDE6GP18545 87 aa10.41□□□□□ -0.74
LIMK2-203ENST00000340552 PMAIP1Q13794 54 aa10.41□□□□□ -0.74
LIMK2-203ENST00000340552 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
LIMK2-203ENST00000340552 Q8N9L7 120 aa10.41□□□□□ -0.74
LIMK2-203ENST00000340552 C16orf74Q96GX8 76 aa10.41□□□□□ -0.74
LIMK2-203ENST00000340552 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
LIMK2-203ENST00000340552 TRRAPQ9Y4A5 3859 aa10.39□□□□□ -0.75
LIMK2-203ENST00000340552 OCR1Q9BZK8 76 aa10.39□□□□□ -0.75
LIMK2-203ENST00000340552 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
LIMK2-203ENST00000340552 HIGD2AQ9BW72 106 aa10.38□□□□□ -0.75
LIMK2-203ENST00000340552 CLPSL2Q6UWE3 100 aa10.37□□□□□ -0.75
LIMK2-203ENST00000340552 TRGV2A0A075B6R0 118 aa10.37□□□□□ -0.75
LIMK2-203ENST00000340552 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
LIMK2-203ENST00000340552 Q6ZRU5 148 aa10.36□□□□□ -0.75
LIMK2-203ENST00000340552 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
LIMK2-203ENST00000340552 IGKV4-1P06312 121 aa10.35□□□□□ -0.75
LIMK2-203ENST00000340552 TRGV4A0A0C4DH28 118 aa10.35□□□□□ -0.75
LIMK2-203ENST00000340552 COX17Q14061 63 aa10.35□□□□□ -0.75
LIMK2-203ENST00000340552 DAD1P61803 113 aa10.34□□□□□ -0.75
LIMK2-203ENST00000340552 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
LIMK2-203ENST00000340552 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
LIMK2-203ENST00000340552 Q6ZRP5 223 aa10.33□□□□□ -0.76
LIMK2-203ENST00000340552 KRTAP24-1Q3LI83 254 aa10.33□□□□□ -0.76
LIMK2-203ENST00000340552 LINC00269Q8N2A0 174 aa10.32□□□□□ -0.76
LIMK2-203ENST00000340552 X6R8D5 127 aa10.3□□□□□ -0.76
LIMK2-203ENST00000340552 IGLV6-57P01721 117 aa10.3□□□□□ -0.76
LIMK2-203ENST00000340552 IGHV4-28A0A0C4DH34 117 aa10.29□□□□□ -0.76
LIMK2-203ENST00000340552 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
LIMK2-203ENST00000340552 Q1T7F1 81 aa10.29□□□□□ -0.76
LIMK2-203ENST00000340552 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
LIMK2-203ENST00000340552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.28□□□□□ -0.76
LIMK2-203ENST00000340552 H3BQ85 93 aa10.28□□□□□ -0.76
LIMK2-203ENST00000340552 DEFB130BP0DP73 79 aa10.27□□□□□ -0.76
LIMK2-203ENST00000340552 DEFB130AP0DP74 79 aa10.27□□□□□ -0.76
LIMK2-203ENST00000340552 APOC4P55056 127 aa10.27□□□□□ -0.76
LIMK2-203ENST00000340552 DEFB135Q30KP9 77 aa10.27□□□□□ -0.76
LIMK2-203ENST00000340552 COX7BP24311 80 aa10.27□□□□□ -0.77
LIMK2-203ENST00000340552 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.77
LIMK2-203ENST00000340552 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
LIMK2-203ENST00000340552 PSPHP1O15172 72 aa10.26□□□□□ -0.77
LIMK2-203ENST00000340552 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
LIMK2-203ENST00000340552 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 357.2 ms