RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 CenpeQ6RT24 2474 aaKnown RBP9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hils1Q9QYL0 170 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 CadB2RQC6 2225 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 AgrnA2ASQ1 1950 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm15080A2BI02 449 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 P01896 185 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rs1Q9Z1L4 224 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Iglv3A0A0B4J1K5 122 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Col9a1Q05722 921 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Sp9Q64HY3 484 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm26727M0QWT1 121 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Bcorl1A2AQH4 1781 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Immp1lQ9CQU8 166 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Mrpl55Q9CZ83 127 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ighv1-49A0A0A6YWX2 117 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv15-103A0A140T8P3 115 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Eif4ebp2P70445 120 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 3110018I06RikQ9CXS0 120 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 4930583I09RikQ9D2E3 102 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm26938S4R185 226 aa9.92□□□□□ -0.82
Trim56-201ENSMUST00000054384 Nlrc5C3VPR6 1915 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 A0A286YE02 88 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Egr1P08046 533 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Zglp1Q1WG82 266 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Morn2Q6UL01 79 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Olfr984Q8VFN1 314 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 MyofQ69ZN7 2048 aaKnown RBP9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Iglc3P01845 104 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Dynlt3P56387 116 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Cd200r1lQ6XJV6 249 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 P04219 140 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Psg25Q497W1 475 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Tmem42Q9CR22 157 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 P01736 120 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm4792Q569Q2 183 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist3h2bbQ8CGP0 126 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hist3h2baQ9D2U9 126 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Med13lQ6JPI3 2207 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trav6d-3A0A075B6B3 112 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Ighv7-2A0A0A6YX91 119 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Zfp362B1ASA5 418 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trav6-3Q5R1E6 112 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 AgaQ64191 346 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv3-2A0A075B5P0 119 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Cela3bQ9CQ52 269 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Plac1Q9JI83 173 aa9.91□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rai1Q61818 1889 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 CntfrO88507 372 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Wipf3P0C7L0 485 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Rchy1Q9CR50 261 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trbv3A0A0A6YYE2 117 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv14-130A0A0G2JF45 117 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Gm7102J3QQ10 178 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Wnk1P83741 2377 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trdv1A0A075B657 112 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Tmem8bB1AWJ5 472 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Hoxd3P09027 433 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 OpalinQ7M750 143 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Carhsp1Q9CR86 148 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Igkv13-84A0A140T8N3 115 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 E030025P04RikA2A6V5 185 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Tmem86bQ497J1 226 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 4931428L18RikQ9D4S9 127 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Trbv30A0A0B4J1P1 111 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Grem1O70326 184 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 MdfiP70331 251 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 DnlzQ9D113 177 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 OtorQ9JIE3 128 aa9.9□□□□□ -0.82
Trim56-201ENSMUST00000054384 Siglec15A7E1W8 342 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 1700025B11RikA0A087WNZ6 93 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 Klf14Q19A41 325 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm7489Q3UT34 171 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 Repin1Q5U4E2 545 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 SNORCQ9CXL7 121 aa9.9□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv4-86A0A0G2JGE7 114 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Crim1Q9JLL0 1037 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Zfhx2Q2MHN3 2562 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv4-62A0A0G2JDW9 117 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Nat8b-psE0CYC6 232 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tcf15Q60756 195 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Hs3st6Q5GFD5 342 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm9881Q8BR56 211 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 CfdP03953 259 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 H2-DMb1P35737 261 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Trav7d-3Q5R1I1 112 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Cox11Q6P8I6 275 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Tex36Q9D5N9 219 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Reg4Q9D8G5 157 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Ighv1-26A0A075B5V0 117 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv6-14A0A140T8P1 115 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv8-24A0A140T8P5 121 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Cpsf4lE9Q2N0 280 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Eml6Q5SQM0 1958 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Gm28269A0A087WSG3 125 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Igkv9-124A0A0G2JDR3 117 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 P18526 117 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Rpl32P62911 135 aaKnown RBP9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Isg15Q64339 161 aaKnown RBP9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Morn3Q8C5T4 241 aa9.89□□□□□ -0.83
Trim56-201ENSMUST00000054384 Wbp2nlQ9D529 359 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 93.3 ms