RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 IGHV3OR16-12A0A075B7B8 117 aa8.62□□□□□ -1.03
SRRT-216ENST00000618262 K7EQG2 157 aa8.62□□□□□ -1.03
SRRT-216ENST00000618262 CLEC2BQ92478 149 aa8.62□□□□□ -1.03
SRRT-216ENST00000618262 TMEM14CQ9P0S9 112 aa8.62□□□□□ -1.03
SRRT-216ENST00000618262 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
SRRT-216ENST00000618262 SOCS3O14543 225 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 Q86TA4 180 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 WFDC9Q8NEX5 89 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 SPINK13Q1W4C9 94 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 LCA10Q71F78 164 aa8.61□□□□□ -1.03
SRRT-216ENST00000618262 IBA57-AS1B1ANH7 110 aa8.6□□□□□ -1.03
SRRT-216ENST00000618262 FUSP35637 526 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRRT-216ENST00000618262 LYZL1Q6UWQ5 148 aa8.6□□□□□ -1.03
SRRT-216ENST00000618262 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
SRRT-216ENST00000618262 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
SRRT-216ENST00000618262 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
SRRT-216ENST00000618262 TENM3Q9P273 2699 aa8.59□□□□□ -1.03
SRRT-216ENST00000618262 TGP01266 2768 aa8.59□□□□□ -1.03
SRRT-216ENST00000618262 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
SRRT-216ENST00000618262 SH2D1AO60880 128 aa8.58□□□□□ -1.04
SRRT-216ENST00000618262 NXPH4O95158 308 aa8.58□□□□□ -1.04
SRRT-216ENST00000618262 UBE2BP63146 152 aa8.58□□□□□ -1.04
SRRT-216ENST00000618262 ESRGQ1W209 222 aa8.58□□□□□ -1.04
SRRT-216ENST00000618262 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
SRRT-216ENST00000618262 NDUFC1O43677 76 aa8.57□□□□□ -1.04
SRRT-216ENST00000618262 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
SRRT-216ENST00000618262 RNASE4P34096 147 aaKnown RBP8.56□□□□□ -1.04
SRRT-216ENST00000618262 PDE6HQ13956 83 aa8.56□□□□□ -1.04
SRRT-216ENST00000618262 PRR9Q5T870 116 aa8.56□□□□□ -1.04
SRRT-216ENST00000618262 COL7A1Q02388 2944 aa8.56□□□□□ -1.04
SRRT-216ENST00000618262 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
SRRT-216ENST00000618262 TRAV12-3A0A0B4J271 114 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 PHF5AQ7RTV0 110 aaKnown RBP8.55□□□□□ -1.04
SRRT-216ENST00000618262 IGLV2-18A0A075B6J9 118 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 DNAL4O96015 105 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 IGLV2-11P01706 119 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 C19orf73Q9NVV2 129 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 A0A0J9YX75 114 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 DEFB4AO15263 64 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 IGHV4-30-4P0DP06 118 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 RMI2Q96E14 147 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
SRRT-216ENST00000618262 COX7A2LO14548 114 aa8.54□□□□□ -1.04
SRRT-216ENST00000618262 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
SRRT-216ENST00000618262 TRAV7A0A075B6U4 112 aa8.54□□□□□ -1.04
SRRT-216ENST00000618262 TRAV23DV6A0A075B6W5 121 aa8.54□□□□□ -1.04
SRRT-216ENST00000618262 RNF185Q96GF1 192 aa8.53□□□□□ -1.04
SRRT-216ENST00000618262 I3L3M4 83 aa8.53□□□□□ -1.04
SRRT-216ENST00000618262 OPRPNQ99935 248 aaPredicted RBP8.53□□□□□ -1.04
SRRT-216ENST00000618262 DEFB135Q30KP9 77 aa8.52□□□□□ -1.04
SRRT-216ENST00000618262 NKAPP1Q8N9T2 125 aa8.52□□□□□ -1.04
SRRT-216ENST00000618262 TRBV6-1A0A0K0K1D8 114 aa8.52□□□□□ -1.05
SRRT-216ENST00000618262 GAS8-AS1O95177 125 aa8.52□□□□□ -1.05
SRRT-216ENST00000618262 LYPD1Q8N2G4 141 aa8.52□□□□□ -1.05
SRRT-216ENST00000618262 PRKDCP78527 4128 aaKnown RBP8.52□□□□□ -1.05
SRRT-216ENST00000618262 ADAMTSL4-AS1Q5T5F5 129 aa8.52□□□□□ -1.05
SRRT-216ENST00000618262 C7orf65Q6ZTY9 151 aa8.52□□□□□ -1.05
SRRT-216ENST00000618262 BCE1O60756 84 aa8.51□□□□□ -1.05
SRRT-216ENST00000618262 LINC00313P59037 77 aa8.51□□□□□ -1.05
SRRT-216ENST00000618262 RPL28P46779 137 aaKnown RBP8.51□□□□□ -1.05
SRRT-216ENST00000618262 CRIP1P50238 77 aa8.51□□□□□ -1.05
SRRT-216ENST00000618262 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
SRRT-216ENST00000618262 TSPEAR-AS2P59090 65 aa8.5□□□□□ -1.05
SRRT-216ENST00000618262 K7EIL1 84 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 AMELXQ99217 191 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 BAALC-AS2P0C853 105 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 SPTSSBQ8NFR3 76 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 DEFB104AQ8WTQ1 72 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 STAB2Q8WWQ8 2551 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 ZFAND2AQ8N6M9 145 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 C11orf21Q9P2W6 132 aa8.49□□□□□ -1.05
SRRT-216ENST00000618262 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 GNRH2O43555 120 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 LINC00846Q9NV44 126 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 PSPHP1O15172 72 aa8.48□□□□□ -1.05
SRRT-216ENST00000618262 GIG44P09565 113 aaPredicted RBP8.48□□□□□ -1.05
SRRT-216ENST00000618262 C11orf86A6NJI1 115 aa8.47□□□□□ -1.05
SRRT-216ENST00000618262 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
SRRT-216ENST00000618262 MP68P56378 58 aa8.47□□□□□ -1.05
SRRT-216ENST00000618262 Q1T7F1 81 aa8.47□□□□□ -1.05
SRRT-216ENST00000618262 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
SRRT-216ENST00000618262 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.05
SRRT-216ENST00000618262 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
SRRT-216ENST00000618262 A8MU10 97 aa8.46□□□□□ -1.06
SRRT-216ENST00000618262 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
SRRT-216ENST00000618262 MED14OSP0DP75 135 aa8.45□□□□□ -1.06
SRRT-216ENST00000618262 UBE2AP49459 152 aa8.45□□□□□ -1.06
SRRT-216ENST00000618262 MIFP14174 115 aa8.44□□□□□ -1.06
SRRT-216ENST00000618262 PHLDA3Q9Y5J5 127 aa8.44□□□□□ -1.06
SRRT-216ENST00000618262 CSMD3Q7Z407 3707 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 IGKV3D-20A0A0C4DH25 116 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 A6NN06 94 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 SYCNQ0VAF6 134 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
SRRT-216ENST00000618262 LINC01554Q52M75 96 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms