RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 HAMPP81172 84 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 CD164Q04900 197 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 SS18Q15532 418 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 ESRGQ1W209 222 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 Q6ZQT0 140 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 Q6ZRU5 148 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 CDC42SE2Q9NRR3 84 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 PRR34Q9NV39 138 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 CHD9Q3L8U1 2897 aa2.56□□□□□ -2
FOXN3-213ENST00000556916 REV3LO60673 3130 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 TRBV7-4A0A0J9YYF1 115 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 TRBV10-1A0A0K0K1A3 114 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 CCL21O00585 134 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 UBE2L6O14933 153 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 IGHV3-11P01762 117 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 NREPQ16612 68 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 Q6ZVQ6 151 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 C6orf223Q8N319 242 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 C11orf72Q8NBR9 251 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 TMEM254Q8TBM7 123 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 TOMM7Q9P0U1 55 aa2.55□□□□□ -2
FOXN3-213ENST00000556916 AHCTF1Q8WYP5 2266 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 UTRNP46939 3433 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 TMEM89A2RUT3 159 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 A8MTW9 85 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 DNAH10OSP0CZ25 163 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 HTN1P15515 57 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 FUSP35637 526 aaKnown RBP eCLIP2.54□□□□□ -23e-8■□□□□ 10.9
FOXN3-213ENST00000556916 DAD1P61803 113 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 Q1T7F1 81 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 C9orf66Q5T8R8 295 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 NTM-AS1Q6ZSK4 140 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 Q6ZTI0 123 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 BPESC1Q9GZL8 116 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 FAM186AA6NE01 2351 aa2.54□□□□□ -2
FOXN3-213ENST00000556916 LYRM9A8MSI8 78 aa2.53□□□□□ -2
FOXN3-213ENST00000556916 BPY2O14599 106 aa2.53□□□□□ -2
FOXN3-213ENST00000556916 LINC00575Q6W349 94 aa2.53□□□□□ -2
FOXN3-213ENST00000556916 LINC01560Q8TB33 94 aa2.53□□□□□ -2
FOXN3-213ENST00000556916 PTPRQQ9UMZ3 2332 aa2.53□□□□□ -2
FOXN3-213ENST00000556916 POLEQ07864 2286 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 DOPEY2Q9Y3R5 2298 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 hDV103S1A0JD37 113 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 LY6HO94772 140 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 INSP01308 110 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 COX17Q14061 63 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 C11orf71Q6IPW1 123 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 MRPL55Q7Z7F7 128 aaKnown RBP2.52□□□□□ -2.01
FOXN3-213ENST00000556916 LINC00612Q8N6U2 182 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 MUC7Q8TAX7 377 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 Q9UF83 564 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 DNAH14Q0VDD8 3507 aa2.52□□□□□ -2.01
FOXN3-213ENST00000556916 SZT2Q5T011 3432 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 A0A096LNT2 108 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 IGHV3OR16-9A0A0B4J2B5 98 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 A6NDX4 124 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 A8MU10 97 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 DEFB131AP59861 70 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 FBXL19-AS1Q494R0 122 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 Q8IZM0 81 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 RETNQ9HD89 108 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 BRCA2P51587 3418 aa2.51□□□□□ -2.01
FOXN3-213ENST00000556916 RPL37AP8A6NKH3 93 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 H3BUX3 64 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 NDUFS5O43920 106 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 UBE2BP63146 152 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 LY6EQ16553 131 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 DEFB114Q30KQ6 69 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 C6orf99Q4VX62 202 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.5□□□□□ -2.01
FOXN3-213ENST00000556916 OCR1Q9BZK8 76 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 WNK2Q9Y3S1 2297 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 CACNA1AO00555 2505 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 SPTBN2O15020 2390 aa2.5□□□□□ -2.01
FOXN3-213ENST00000556916 MKI67P46013 3256 aaKnown RBP2.5□□□□□ -2.01
FOXN3-213ENST00000556916 TRGV1A0A0A0MS02 117 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 IGKV3OR2-268A0A0C4DH90 116 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 M0R2N4 97 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 IGKV4-1P06312 121 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 COX7BP24311 80 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 UBE2AP49459 152 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
FOXN3-213ENST00000556916 TYMSOSQ8TAI1 123 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 HIGD2AQ9BW72 106 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 CYP4F30PQ9H0H9 118 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 ZZEF1O43149 2961 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 GPR179Q6PRD1 2367 aa2.49□□□□□ -2.01
FOXN3-213ENST00000556916 RANBP2P49792 3224 aaKnown RBP2.48□□□□□ -2.01
FOXN3-213ENST00000556916 LCE6AA0A183 80 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 LINC00959A0A1B0GUT2 108 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 A0A1B0GW54 56 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 CD164L2Q6UWJ8 174 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 Q6ZQY7 126 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 SCXQ7RTU7 201 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 STHQ8IWL8 128 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 LAMA1P25391 3075 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms