RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 HCRTO43612 131 aa2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 SPINK7P58062 85 aa2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 LINC00472Q9H8W2 130 aa2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 GNG13Q9P2W3 67 aa2.1□□□□□ -2.07
SMARCA5-202ENST00000508573 LAMC1P11047 1609 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 USP32Q8NFA0 1604 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 ALS2Q96Q42 1657 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 PKD1L3Q7Z443 1732 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 IFT172Q9UG01 1749 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 SHROOM3Q8TF72 1996 aa2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 HMGA1P17096 107 aaKnown RBP2.09□□□□□ -2.07
SMARCA5-202ENST00000508573 DNAJC13O75165 2243 aa2.09□□□□□ -2.08
SMARCA5-202ENST00000508573 A0A1B0GUL6 1792 aa2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 MDC1Q14676 2089 aaKnown RBP2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 GDF5OSQ5U4N7 250 aa2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 ANKRD36A6QL64 1941 aa2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 CICQ96RK0 1608 aaPredicted RBP2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 CFAP43Q8NDM7 1665 aa2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 PARP4Q9UKK3 1724 aaKnown RBP2.08□□□□□ -2.08
SMARCA5-202ENST00000508573 C5P01031 1676 aa2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 NHSQ6T4R5 1651 aa2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 H0Y9P7 68 aa2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 ATXN8Q156A1 80 aa2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 CCL19Q99731 98 aa2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 FAM103A1Q9BTL3 118 aaKnown RBP2.07□□□□□ -2.08
SMARCA5-202ENST00000508573 MAST1Q9Y2H9 1570 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 TIAM2Q8IVF5 1701 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 A0A1B0GUT8 65 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 J3QRE1 110 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 IFI6P09912 130 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 ACYP2P14621 99 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 CAV3P56539 151 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 COX17Q14061 63 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 SPATA8Q6RVD6 105 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 OBSCN-AS1Q96MR7 158 aa2.06□□□□□ -2.08
SMARCA5-202ENST00000508573 Q6ZQY7 126 aa2.05□□□□□ -2.08
SMARCA5-202ENST00000508573 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SMARCA5-202ENST00000508573 UBR3Q6ZT12 1888 aa2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 TMEM263Q8WUH6 116 aaKnown RBP2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 SMIM4Q8WVI0 70 aa2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 SYCP2Q9BX26 1530 aa2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 FXYD6Q9H0Q3 95 aa2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 EIF2AK4Q9P2K8 1649 aaKnown RBP2.04□□□□□ -2.08
SMARCA5-202ENST00000508573 ZFHX3Q15911 3703 aa2.03□□□□□ -2.08
SMARCA5-202ENST00000508573 SAMD9Q5K651 1589 aa2.03□□□□□ -2.08
SMARCA5-202ENST00000508573 TRAV21A0A0B4J279 112 aa2.03□□□□□ -2.08
SMARCA5-202ENST00000508573 C10orf113Q5VZT2 155 aa2.03□□□□□ -2.08
SMARCA5-202ENST00000508573 MYO7AQ13402 2215 aa2.03□□□□□ -2.08
SMARCA5-202ENST00000508573 ICE1Q9Y2F5 2266 aa2.02□□□□□ -2.09
SMARCA5-202ENST00000508573 MED13LQ71F56 2210 aa2.02□□□□□ -2.09
SMARCA5-202ENST00000508573 ANKRD50Q9ULJ7 1429 aa2.02□□□□□ -2.09
SMARCA5-202ENST00000508573 UGGT1Q9NYU2 1555 aa2.02□□□□□ -2.09
SMARCA5-202ENST00000508573 LRRC7Q96NW7 1537 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 TSC2P49815 1807 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 COL14A1Q05707 1796 aaKnown RBP2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 BCORQ6W2J9 1755 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 PAPPA2Q9BXP8 1791 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 RICTORQ6R327 1708 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 LINC01549A6NIU2 74 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 NREPQ16612 68 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 E9PCH4 1651 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 NCOA6Q14686 2063 aaPredicted RBP2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 VWDEQ8N2E2 1590 aa2.01□□□□□ -2.09
SMARCA5-202ENST00000508573 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
SMARCA5-202ENST00000508573 SNRPGP15A8MWD9 76 aa2□□□□□ -2.09
SMARCA5-202ENST00000508573 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
SMARCA5-202ENST00000508573 ABCC6O95255 1503 aa2□□□□□ -2.09
SMARCA5-202ENST00000508573 A0A0D9SFI3 127 aa1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 LCE6AA0A183 80 aa1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 G3V318 75 aa1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 KRTAP13-4Q3LI77 160 aa1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 CPS1P31327 1500 aa1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 INTS1Q8N201 2190 aaKnown RBP1.99□□□□□ -2.09
SMARCA5-202ENST00000508573 NDUFB1O75438 58 aa1.98□□□□□ -2.09
SMARCA5-202ENST00000508573 C10orf99Q6UWK7 81 aa1.98□□□□□ -2.09
SMARCA5-202ENST00000508573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.98□□□□□ -2.09
SMARCA5-202ENST00000508573 ABCA1O95477 2261 aa1.98□□□□□ -2.09
SMARCA5-202ENST00000508573 SSC5DA1L4H1 1573 aa1.98□□□□□ -2.09
SMARCA5-202ENST00000508573 FMN2Q9NZ56 1722 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 A0A096LNT2 108 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 GVQW2A0A096LPI5 108 aaPredicted RBP1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 LINC00959A0A1B0GUT2 108 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 UNQ6190/PRO20217Q6UXQ8 127 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 WFDC9Q8NEX5 89 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 LRRC37A2A6NM11 1700 aa1.97□□□□□ -2.09
SMARCA5-202ENST00000508573 CACNA1GO43497 2377 aa1.96□□□□□ -2.09
SMARCA5-202ENST00000508573 TRBV30A0A0K0K1B3 111 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 TRBV6-1A0A0K0K1D8 114 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 Q6ZRX8 168 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 NRAPQ86VF7 1730 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 SLIT1O75093 1534 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 CROCC2H7BZ55 1655 aa1.96□□□□□ -2.1
SMARCA5-202ENST00000508573 BIVM-ERCC5R4GMW8 1640 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 A0A1B0GU69 56 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 LY6G6CO95867 125 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 DEFB103AP81534 67 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 SMIM11BQ8TCY0 68 aa1.95□□□□□ -2.1
SMARCA5-202ENST00000508573 PLAC4Q8WY50 150 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms