RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 CHCHD10Q8WYQ3 142 aaPredicted RBP4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGLV2-23P01705 113 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 PATE1Q8WXA2 126 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 LOC400499M0QZD8 3231 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 LAMA5O15230 3695 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 DEFB133Q30KQ1 61 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 LMO4P61968 165 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 ZNF702PQ9H963 129 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 MRPL33O75394 65 aaKnown RBP4.22□□□□□ -1.73
PDE4D-216ENST00000507116 PRR4Q16378 134 aa4.22□□□□□ -1.73
PDE4D-216ENST00000507116 ABCA1O95477 2261 aa4.21□□□□□ -1.73
PDE4D-216ENST00000507116 POLQO75417 2590 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3-16A0A0C4DH30 117 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 H3BQ85 93 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3-20A0A0C4DH32 117 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 K7EQD1 137 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 RNASE1P07998 156 aaKnown RBP4.21□□□□□ -1.74
PDE4D-216ENST00000507116 DOPEY2Q9Y3R5 2298 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 BOD1L1Q8NFC6 3051 aa4.21□□□□□ -1.74
PDE4D-216ENST00000507116 PRB2P02812 416 aaPredicted RBP4.2□□□□□ -1.74
PDE4D-216ENST00000507116 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 SETXQ7Z333 2677 aaKnown RBP4.2□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3-73A0A0B4J1V6 119 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 K7EIM0 57 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 LY6G6DO95868 133 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 C1orf134Q5TEV5 83 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV1-3A0A0C4DH29 117 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 NDUFA4O00483 81 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 APELAP0DMC3 54 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 DEFB114Q30KQ6 69 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
PDE4D-216ENST00000507116 SPG11Q96JI7 2443 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 KALRNO60229 2985 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 CCDC168Q8NDH2 2452 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 M0R2N4 97 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 LINC01006Q8NI28 216 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 FAM104AQ969W3 186 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 MAST4O15021 2626 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 ABCA12Q86UK0 2595 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 M0QY20 66 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3-53P01767 116 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 RNASE3P12724 160 aaKnown RBP4.19□□□□□ -1.74
PDE4D-216ENST00000507116 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 Q8NAQ8 132 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 PCNX1Q96RV3 2341 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 IGLV4-60A0A075B6I1 120 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV4-31P0DP07 118 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 MYO9AB2RTY4 2548 aa4.19□□□□□ -1.74
PDE4D-216ENST00000507116 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 TRGV2A0A075B6R0 118 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 SRRM5B3KS81 715 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 PLA2G2CQ5R387 149 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 PRR9Q5T870 116 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 MUC7Q8TAX7 377 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 WFDC10AQ9H1F0 79 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 IGSF10Q6WRI0 2623 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 SORL1Q92673 2214 aa4.18□□□□□ -1.74
PDE4D-216ENST00000507116 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.17□□□□□ -1.74
PDE4D-216ENST00000507116 ETDCA0A1B0GVM5 59 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 NBEAQ8NFP9 2946 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 USP9XQ93008 2570 aaPredicted RBP4.17□□□□□ -1.74
PDE4D-216ENST00000507116 SMIM1B2RUZ4 78 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 IGKV3D-15A0A087WSY6 115 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 A0A1B0GW54 56 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 COX7B2Q8TF08 81 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 ZNRD1Q9P1U0 126 aa4.17□□□□□ -1.74
PDE4D-216ENST00000507116 COL27A1Q8IZC6 1860 aaPredicted RBP4.16□□□□□ -1.74
PDE4D-216ENST00000507116 CLPSL1A2RUU4 121 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 IGKV3-15P01624 115 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 ROMO1P60602 79 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 RTL8CO15255 209 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 CCL18P55774 89 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 Q8N9L7 120 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3OR16-13A0A075B7E8 117 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 IGHV3-72A0A0B4J1Y9 119 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 ATP6V0E1O15342 81 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 ZFAND2AQ8N6M9 145 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 GAFA1Q96PS6 74 aa4.16□□□□□ -1.74
PDE4D-216ENST00000507116 PLAC8Q9NZF1 115 aa4.15□□□□□ -1.74
PDE4D-216ENST00000507116 MTORP42345 2549 aa4.15□□□□□ -1.74
PDE4D-216ENST00000507116 SMG1Q96Q15 3661 aaKnown RBP4.15□□□□□ -1.74
PDE4D-216ENST00000507116 GCN1Q92616 2671 aaKnown RBP4.15□□□□□ -1.75
PDE4D-216ENST00000507116 SPINK7P58062 85 aa4.15□□□□□ -1.75
PDE4D-216ENST00000507116 LINC00158P58513 81 aa4.15□□□□□ -1.75
PDE4D-216ENST00000507116 WDFY3Q8IZQ1 3526 aa4.15□□□□□ -1.75
PDE4D-216ENST00000507116 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
PDE4D-216ENST00000507116 CSAG1Q6PB30 78 aa4.14□□□□□ -1.75
PDE4D-216ENST00000507116 CFAP46Q8IYW2 2715 aa4.14□□□□□ -1.75
PDE4D-216ENST00000507116 A0A1W2PNM2 257 aa4.14□□□□□ -1.75
PDE4D-216ENST00000507116 LINC00612Q8N6U2 182 aa4.14□□□□□ -1.75
PDE4D-216ENST00000507116 ATMQ13315 3056 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms