RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 H3BPC8 53 aa4.19□□□□□ -1.74
RFC1-202ENST00000381897 WNK2Q9Y3S1 2297 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 M0QY20 66 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 POM121L12Q8N7R1 296 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 ZNF625Q96I27 306 aaPredicted RBP4.18□□□□□ -1.74
RFC1-202ENST00000381897 OPRPNQ99935 248 aaPredicted RBP4.18□□□□□ -1.74
RFC1-202ENST00000381897 A0A1B0GW54 56 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 TSHBP01222 138 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 RNASE3P12724 160 aaKnown RBP4.18□□□□□ -1.74
RFC1-202ENST00000381897 TM2D3Q9BRN9 247 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 IGHV3-16A0A0C4DH30 117 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 C5orf38Q86SI9 138 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 C6orf223Q8N319 242 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 PCSK5Q92824 1860 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 PLXNB1O43157 2135 aa4.18□□□□□ -1.74
RFC1-202ENST00000381897 LY6G6DO95868 133 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
RFC1-202ENST00000381897 PRR9Q5T870 116 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 LINC00269Q8N2A0 174 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 NCOR2Q9Y618 2525 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 LY6EQ16553 131 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 TRBV10-3A0A0K0K1G6 114 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 Q8N6K4 173 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 PTPRBP23467 1997 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.17□□□□□ -1.74
RFC1-202ENST00000381897 IGHV4-30-2A0A087WSY4 118 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 IGKV2-29A2NJV5 120 aaPredicted RBP4.17□□□□□ -1.74
RFC1-202ENST00000381897 SPINK13Q1W4C9 94 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 RNASE13Q5GAN3 156 aaKnown RBP4.17□□□□□ -1.74
RFC1-202ENST00000381897 C10orf25Q5T742 122 aa4.17□□□□□ -1.74
RFC1-202ENST00000381897 ASH1LQ9NR48 2969 aaKnown RBP4.16□□□□□ -1.74
RFC1-202ENST00000381897 AGRNO00468 2067 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 KLLNB2CW77 178 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 TLN1Q9Y490 2541 aaKnown RBP4.16□□□□□ -1.74
RFC1-202ENST00000381897 C11orf71Q6IPW1 123 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 Q8NA96 180 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 PTPN13Q12923 2485 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 DCANP1Q8TF63 244 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 AMELXQ99217 191 aa4.16□□□□□ -1.74
RFC1-202ENST00000381897 NAV3Q8IVL0 2385 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 RAI1Q7Z5J4 1906 aaPredicted RBP4.15□□□□□ -1.74
RFC1-202ENST00000381897 C3orf84H3BNL1 204 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 CHCHD7Q9BUK0 85 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 PSCAO43653 123 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 PDE6GP18545 87 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 ODF3L2Q3SX64 289 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 C5orf56Q8N8D9 126 aa4.15□□□□□ -1.74
RFC1-202ENST00000381897 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.75
RFC1-202ENST00000381897 COX7B2Q8TF08 81 aa4.15□□□□□ -1.75
RFC1-202ENST00000381897 IGKV3OR2-268A0A0C4DH90 116 aa4.15□□□□□ -1.75
RFC1-202ENST00000381897 LECT2O14960 151 aa4.15□□□□□ -1.75
RFC1-202ENST00000381897 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.75
RFC1-202ENST00000381897 CDC42SE1Q9NRR8 79 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 SPTBN4Q9H254 2564 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 IGHV3-38A0A0C4DH36 116 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 KIF25-AS1Q9Y6Z4 181 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 DEFB112Q30KQ8 113 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 ADAMTSL4-AS1Q5T5F5 129 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 MIR7-3HGQ8N6C7 128 aa4.14□□□□□ -1.75
RFC1-202ENST00000381897 BCE1O60756 84 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 B9D2Q9BPU9 175 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 UBE2D4Q9Y2X8 147 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 ARHGAP32A7KAX9 2087 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 MYO18BQ8IUG5 2567 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.13□□□□□ -1.75
RFC1-202ENST00000381897 TRBV6-8A0A0A6YYG3 113 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 DSCAMO60469 2012 aa4.13□□□□□ -1.75
RFC1-202ENST00000381897 FASNP49327 2511 aaKnown RBP4.13□□□□□ -1.75
RFC1-202ENST00000381897 TRAV7A0A075B6U4 112 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 TRGV1A0A0A0MS02 117 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 CCKP06307 115 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 UNQ9165/PRO28630Q6UXU0 137 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 TRGV2A0A075B6R0 118 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 H3BUX3 64 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 BPESC1Q9GZL8 116 aa4.12□□□□□ -1.75
RFC1-202ENST00000381897 TRBV10-1A0A0K0K1A3 114 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 LINC00315P59091 139 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 DOPEY2Q9Y3R5 2298 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 DEFB131AP59861 70 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 MALRD1Q5VYJ5 2156 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 CUBNO60494 3623 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 TRGV4A0A0C4DH28 118 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 IGHV3-53P01767 116 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 KLK9Q2XQG4 91 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 LIMD2Q9BT23 127 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 LITAFQ99732 161 aa4.11□□□□□ -1.75
RFC1-202ENST00000381897 TRBV7-6A0A0J9YX20 115 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 DEFB1P60022 68 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
RFC1-202ENST00000381897 ZNF292O60281 2723 aa4.1□□□□□ -1.75
RFC1-202ENST00000381897 NCR3O14931 201 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms