RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TMEM89A2RUT3 159 aa11.02□□□□□ -0.65
RTN3-205ENST00000356000 IGHV3-53P01767 116 aa11.02□□□□□ -0.65
RTN3-205ENST00000356000 FUSP35637 526 aaKnown RBP eCLIP11.02□□□□□ -0.65
RTN3-205ENST00000356000 ABCA12Q86UK0 2595 aa11.02□□□□□ -0.65
RTN3-205ENST00000356000 DAD1P61803 113 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 C5orf56Q8N8D9 126 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 A0A096LNT2 108 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 M0R2N4 97 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 PRYO14603 147 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 Q1T7F1 81 aa11.01□□□□□ -0.65
RTN3-205ENST00000356000 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
RTN3-205ENST00000356000 KRTAP10-9P60411 292 aa11□□□□□ -0.65
RTN3-205ENST00000356000 C6orf223Q8N319 242 aa11□□□□□ -0.65
RTN3-205ENST00000356000 NBASA2RRP1 2371 aa11□□□□□ -0.65
RTN3-205ENST00000356000 ZFHX3Q15911 3703 aa10.99□□□□□ -0.65
RTN3-205ENST00000356000 K7EQD1 137 aa10.99□□□□□ -0.65
RTN3-205ENST00000356000 CDC42SE2Q9NRR3 84 aa10.99□□□□□ -0.65
RTN3-205ENST00000356000 TRBV10-1A0A0K0K1A3 114 aa10.99□□□□□ -0.65
RTN3-205ENST00000356000 DEFB113Q30KQ7 82 aa10.98□□□□□ -0.65
RTN3-205ENST00000356000 BOD1L1Q8NFC6 3051 aa10.98□□□□□ -0.65
RTN3-205ENST00000356000 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
RTN3-205ENST00000356000 LINC01560Q8TB33 94 aa10.98□□□□□ -0.65
RTN3-205ENST00000356000 CREBBPQ92793 2442 aa10.97□□□□□ -0.65
RTN3-205ENST00000356000 IGHV3-11P01762 117 aa10.97□□□□□ -0.65
RTN3-205ENST00000356000 USMG5Q96IX5 58 aa10.97□□□□□ -0.65
RTN3-205ENST00000356000 BPY2O14599 106 aa10.97□□□□□ -0.65
RTN3-205ENST00000356000 NANOS2P60321 138 aaKnown RBP10.96□□□□□ -0.65
RTN3-205ENST00000356000 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
RTN3-205ENST00000356000 hDV103S1A0JD37 113 aa10.96□□□□□ -0.66
RTN3-205ENST00000356000 RNASE1P07998 156 aaKnown RBP10.96□□□□□ -0.66
RTN3-205ENST00000356000 Q6ZRP5 223 aa10.96□□□□□ -0.66
RTN3-205ENST00000356000 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.66
RTN3-205ENST00000356000 K7EMT4 169 aa10.95□□□□□ -0.66
RTN3-205ENST00000356000 HTN1P15515 57 aa10.95□□□□□ -0.66
RTN3-205ENST00000356000 LY6HO94772 140 aa10.94□□□□□ -0.66
RTN3-205ENST00000356000 MRPL55Q7Z7F7 128 aaKnown RBP10.94□□□□□ -0.66
RTN3-205ENST00000356000 PDZD2O15018 2839 aa10.93□□□□□ -0.66
RTN3-205ENST00000356000 C9orf66Q5T8R8 295 aa10.93□□□□□ -0.66
RTN3-205ENST00000356000 PDE6GP18545 87 aa10.91□□□□□ -0.66
RTN3-205ENST00000356000 ITPR2Q14571 2701 aa10.91□□□□□ -0.66
RTN3-205ENST00000356000 H3BUA1 57 aa10.91□□□□□ -0.66
RTN3-205ENST00000356000 OCR1Q9BZK8 76 aa10.91□□□□□ -0.66
RTN3-205ENST00000356000 NBPF19A0A087WUL8 3843 aa10.91□□□□□ -0.66
RTN3-205ENST00000356000 PRM2P04554 102 aa10.9□□□□□ -0.66
RTN3-205ENST00000356000 ZFP36P26651 326 aaKnown RBP10.9□□□□□ -0.66
RTN3-205ENST00000356000 C11orf44Q8N8P7 122 aa10.89□□□□□ -0.67
RTN3-205ENST00000356000 SCXQ7RTU7 201 aa10.89□□□□□ -0.67
RTN3-205ENST00000356000 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
RTN3-205ENST00000356000 NOTCH2Q04721 2471 aa10.88□□□□□ -0.67
RTN3-205ENST00000356000 APCP25054 2843 aa10.88□□□□□ -0.67
RTN3-205ENST00000356000 LINC00575Q6W349 94 aa10.87□□□□□ -0.67
RTN3-205ENST00000356000 OTOGQ6ZRI0 2925 aa10.87□□□□□ -0.67
RTN3-205ENST00000356000 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
RTN3-205ENST00000356000 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
RTN3-205ENST00000356000 HIGD2AQ9BW72 106 aa10.86□□□□□ -0.67
RTN3-205ENST00000356000 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
RTN3-205ENST00000356000 UTP20O75691 2785 aaKnown RBP10.85□□□□□ -0.67
RTN3-205ENST00000356000 ADGRG4Q8IZF6 3080 aa10.85□□□□□ -0.67
RTN3-205ENST00000356000 LRCOL1A6NCL2 159 aa10.85□□□□□ -0.67
RTN3-205ENST00000356000 PSPHP1O15172 72 aa10.85□□□□□ -0.67
RTN3-205ENST00000356000 TRAV22A0A0B4J277 110 aa10.85□□□□□ -0.67
RTN3-205ENST00000356000 ANKRD17O75179 2603 aaKnown RBP10.84□□□□□ -0.67
RTN3-205ENST00000356000 IGHV3OR16-9A0A0B4J2B5 98 aa10.84□□□□□ -0.67
RTN3-205ENST00000356000 COL12A1Q99715 3063 aa10.84□□□□□ -0.67
RTN3-205ENST00000356000 PRR3P79522 188 aaKnown RBP10.84□□□□□ -0.67
RTN3-205ENST00000356000 KTN1-AS1Q86SY8 53 aa10.84□□□□□ -0.67
RTN3-205ENST00000356000 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
RTN3-205ENST00000356000 C1orf64Q8NEQ6 169 aa10.83□□□□□ -0.68
RTN3-205ENST00000356000 C6orf99Q4VX62 202 aa10.83□□□□□ -0.68
RTN3-205ENST00000356000 KRTAP1-3Q8IUG1 177 aa10.83□□□□□ -0.68
RTN3-205ENST00000356000 FBN2P35556 2912 aa10.82□□□□□ -0.68
RTN3-205ENST00000356000 LMO4P61968 165 aa10.82□□□□□ -0.68
RTN3-205ENST00000356000 CCL19Q99731 98 aa10.82□□□□□ -0.68
RTN3-205ENST00000356000 F8P00451 2351 aa10.82□□□□□ -0.68
RTN3-205ENST00000356000 UBE2L6O14933 153 aa10.81□□□□□ -0.68
RTN3-205ENST00000356000 IGHV4-31P0DP07 118 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 LINC01356Q8N9X3 169 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 LINC00588Q9Y4M8 146 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 CELSR2Q9HCU4 2923 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 A8MTW9 85 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 IGKV4-1P06312 121 aa10.8□□□□□ -0.68
RTN3-205ENST00000356000 DCHS2Q6V1P9 2916 aa10.79□□□□□ -0.68
RTN3-205ENST00000356000 IGLV1-40P01703 118 aa10.79□□□□□ -0.68
RTN3-205ENST00000356000 C2CD3Q4AC94 2353 aa10.79□□□□□ -0.68
RTN3-205ENST00000356000 SYCNQ0VAF6 134 aa10.79□□□□□ -0.68
RTN3-205ENST00000356000 RELNP78509 3460 aa10.79□□□□□ -0.68
RTN3-205ENST00000356000 H3BQ85 93 aa10.78□□□□□ -0.68
RTN3-205ENST00000356000 DSCR9P59020 149 aa10.78□□□□□ -0.68
RTN3-205ENST00000356000 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
RTN3-205ENST00000356000 LYRM9A8MSI8 78 aa10.77□□□□□ -0.68
RTN3-205ENST00000356000 AKAP9Q99996 3911 aa10.77□□□□□ -0.69
RTN3-205ENST00000356000 UBE2BP63146 152 aa10.77□□□□□ -0.69
RTN3-205ENST00000356000 SORL1Q92673 2214 aa10.77□□□□□ -0.69
RTN3-205ENST00000356000 A8MU10 97 aa10.76□□□□□ -0.69
RTN3-205ENST00000356000 IGKV3OR2-268A0A0C4DH90 116 aa10.76□□□□□ -0.69
RTN3-205ENST00000356000 Q8N9L7 120 aa10.75□□□□□ -0.69
RTN3-205ENST00000356000 LRBAP50851 2863 aa10.75□□□□□ -0.69
RTN3-205ENST00000356000 LCE6AA0A183 80 aa10.74□□□□□ -0.69
RTN3-205ENST00000356000 STHQ8IWL8 128 aa10.74□□□□□ -0.69
RTN3-205ENST00000356000 LINC01006Q8NI28 216 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms