RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 A0A1B0GWA3 101 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 TCRBV3S1A0A5B6 114 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 GYPBP06028 91 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 IFITM1P13164 125 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 KRTAP10-1P60331 282 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 NPC2P61916 151 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 HSD52Q0P140 79 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 KRTAP13-4Q3LI77 160 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 PP632Q6XCG6 107 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 LINC00322Q6ZN03 302 aaPredicted RBP1.93□□□□□ -2.1
VPS13D-207ENST00000476169 SMR3AQ99954 134 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 MYO18AQ92614 2054 aaKnown RBP1.93□□□□□ -2.1
VPS13D-207ENST00000476169 ZZEF1O43149 2961 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 RTTNQ86VV8 2226 aa1.93□□□□□ -2.1
VPS13D-207ENST00000476169 ACACAQ13085 2346 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 FAM208BQ5VWN6 2430 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 MUC4Q99102 2169 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 A0A0J9YY99 117 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 CPSF4LA6NMK7 179 aaKnown RBP1.92□□□□□ -2.1
VPS13D-207ENST00000476169 IFNA17P01571 189 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 GNGT1P63211 74 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 SPTSSBQ8NFR3 76 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 ZNF563Q8TA94 476 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 TSKUQ8WUA8 353 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 DMAC1Q96GE9 116 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 RPRMQ9NS64 109 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 MRPL35Q9NZE8 188 aaKnown RBP1.92□□□□□ -2.1
VPS13D-207ENST00000476169 SPTA1P02549 2419 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 FASNP49327 2511 aaKnown RBP1.92□□□□□ -2.1
VPS13D-207ENST00000476169 LAMA5O15230 3695 aa1.92□□□□□ -2.1
VPS13D-207ENST00000476169 BSNQ9UPA5 3926 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 ALPK2Q86TB3 2170 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 TRAV30A0A087WSZ9 112 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 NUPR2A6NF83 97 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 FAM24AA6NFZ4 105 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 OOSP1A8MZH6 123 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 M0R143 59 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 INE1O15225 51 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 SPINK8P0C7L1 97 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 CBLN1P23435 193 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
VPS13D-207ENST00000476169 C12orf73Q69YU5 71 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 ACBD7Q8N6N7 88 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 IGSF10Q6WRI0 2623 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 HECTD1Q9ULT8 2610 aa1.91□□□□□ -2.1
VPS13D-207ENST00000476169 SPENQ96T58 3664 aaKnown RBP1.9□□□□□ -2.1
VPS13D-207ENST00000476169 CFAP46Q8IYW2 2715 aa1.9□□□□□ -2.1
VPS13D-207ENST00000476169 TLN1Q9Y490 2541 aaKnown RBP1.9□□□□□ -2.1
VPS13D-207ENST00000476169 WDFY3Q8IZQ1 3526 aa1.9□□□□□ -2.1
VPS13D-207ENST00000476169 FRYLO94915 3013 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 DMXL2Q8TDJ6 3036 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 RELNP78509 3460 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 A0A096LNT2 108 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 TRBV10-1A0A0K0K1A3 114 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 M0R2N4 97 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 IGLV3-1P01715 115 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 CCKP06307 115 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 FXYD6P3P58550 94 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 S100A10P60903 97 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 SPATA45Q537H7 98 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 C9orf116Q5BN46 136 aaPredicted RBP1.9□□□□□ -2.11
VPS13D-207ENST00000476169 NCMAPQ5T1S8 102 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 GDF5OSQ5U4N7 250 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 LINC00526Q96FQ7 95 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 ICE1Q9Y2F5 2266 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 LOC400499M0QZD8 3231 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 ITPR1Q14643 2758 aa1.9□□□□□ -2.11
VPS13D-207ENST00000476169 GOLGA4Q13439 2230 aaKnown RBP1.9□□□□□ -2.11
VPS13D-207ENST00000476169 KNTC1P50748 2209 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IGKV3D-7A0A0C4DH55 119 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IGKV3OR2-268A0A0C4DH90 116 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 LYNX1G3V0Z9 82 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 MRPL33O75394 65 aaKnown RBP1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 LYNX1P0DP58 116 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 INSL4Q14641 139 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IFI27L1Q96BM0 104 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 ANKRD11Q6UB99 2663 aaPredicted RBP1.89□□□□□ -2.11
VPS13D-207ENST00000476169 NOTCH2Q04721 2471 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 DOPEY1Q5JWR5 2465 aa1.89□□□□□ -2.11
VPS13D-207ENST00000476169 IGKV3-7A0A075B6H7 116 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 LOC110117498A0A087WWA1 95 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 PDE6GP18545 87 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 RPS27P42677 84 aaKnown RBP1.88□□□□□ -2.11
VPS13D-207ENST00000476169 DEFB107AQ8IZN7 70 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 Q8N8P6 123 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 DSCR8Q96T75 97 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 AMELYQ99218 206 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 CCL19Q99731 98 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 MGAQ8IWI9 3026 aa1.88□□□□□ -2.11
VPS13D-207ENST00000476169 FLNBO75369 2602 aaKnown RBP1.87□□□□□ -2.11
VPS13D-207ENST00000476169 BAHCC1Q9P281 2608 aa1.87□□□□□ -2.11
VPS13D-207ENST00000476169 FBN2P35556 2912 aa1.87□□□□□ -2.11
VPS13D-207ENST00000476169 LAMA1P25391 3075 aa1.87□□□□□ -2.11
VPS13D-207ENST00000476169 NINQ8N4C6 2090 aa1.87□□□□□ -2.11
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