RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 TRBV20-1A0A075B6N2 111 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 IGKV2-40A0A087WW87 121 aaPredicted RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 NDUFC2O95298 119 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 IGKV2D-40P01614 121 aaPredicted RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 ZNF25P17030 456 aaPredicted RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 CACNA1HO95180 2353 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 PLXNB1O43157 2135 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 C19orf84I3L1E1 186 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 I3L3M4 83 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 M0R3E3 92 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 TIMM17BO60830 172 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 RPL28P46779 137 aaKnown RBP2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 DCANP1Q8TF63 244 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 SNHG12Q9BXW3 62 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 HHLA3Q9XRX5 114 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 CNTRLQ7Z7A1 2325 aa2.37□□□□□ -2.03
NUDCD1-202ENST00000427660 A0A096LNT2 108 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 H3BT86 120 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 M0R2P5 195 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 SPINK4O60575 86 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 FABP2P12104 132 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 IFITM1P13164 125 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 RNASE4P34096 147 aaKnown RBP2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 CRIP1P50238 77 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 ZNF80P51504 273 aaPredicted RBP2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 MRPS36P82909 103 aaKnown RBP2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 SCGB3A1Q96QR1 104 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 IMUPQ9GZP8 106 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 PRO1933Q9H354 126 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 PLCE1Q9P212 2302 aa2.36□□□□□ -2.03
NUDCD1-202ENST00000427660 ANKHD1Q8IWZ3 2542 aaKnown RBP2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 F8W1H4 67 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 H3BVH4 76 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 K7EP13 123 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 GDF5OSQ5U4N7 250 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 LINC00322Q6ZN03 302 aaPredicted RBP2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 NDUFA11Q86Y39 141 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 BDP1A6H8Y1 2624 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 CACNA1BQ00975 2339 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 RTTNQ86VV8 2226 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 MUC21A0A0G2JKD1 596 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 MUC21A0A140T8X8 626 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 G3V318 75 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 J3QKU1 62 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 SNCGO76070 127 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 COX6CP09669 75 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 P0C880 135 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 APELAP0DMC3 54 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 DEFB112Q30KQ8 113 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 BVES-AS1Q5T3Y7 98 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 LCA10Q71F78 164 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 FAM19A2Q8N3H0 131 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 Q8NDZ9 215 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 TMEM263Q8WUH6 116 aaKnown RBP2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 Q9BRP9 147 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 POLEQ07864 2286 aa2.35□□□□□ -2.03
NUDCD1-202ENST00000427660 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 H7C2G1 150 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 SCGB1A1P11684 91 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 LGALS3P17931 250 aaKnown RBP2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 POLR2KP53803 58 aaKnown RBP2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 Q8TAT8 98 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 SPANXCQ9NY87 97 aa2.34□□□□□ -2.03
NUDCD1-202ENST00000427660 FAM186AA6NE01 2351 aa2.34□□□□□ -2.04
NUDCD1-202ENST00000427660 TMEM262E9PQX1 116 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 K7EP34 96 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 ZNF73O43830 326 aaPredicted RBP2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 NUPR1O60356 82 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 MGPP08493 103 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 RNASE3P12724 160 aaKnown RBP2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 ZNF56Q15929 161 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 TMSB15BA0A087X1C1 80 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 TRBV6-4A0A1B0GX49 114 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 CARD19Q96LW7 228 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 PRADC1Q9BSG0 188 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 PTPRQQ9UMZ3 2332 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 URB1O60287 2271 aaKnown RBP2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 TNCP24821 2201 aa2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 PTPRZ1P23471 2315 aaPredicted RBP2.33□□□□□ -2.04
NUDCD1-202ENST00000427660 A0A1B0GV90 55 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 FXYD2P54710 66 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 LINC01554Q52M75 96 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 LINC01600Q96MT4 127 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 ZNF292O60281 2723 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 CADP27708 2225 aa2.32□□□□□ -2.04
NUDCD1-202ENST00000427660 TRBV25-1A0A075B6N4 114 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms