RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Trav4-2A0A075B638 110 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Cbln3Q9JHG0 197 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Defa7P50705 93 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Zfp72Q0VFY0 435 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Rnf166Q3U9F6 237 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Immp1lQ9CQU8 166 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 SelenokQ9JLJ1 94 aa12.6□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Trdv2-1A0A0G2JGB9 116 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 GlmpQ9JHJ3 404 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Sipa1l3G3X9J0 1776 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Ighv1-49A0A0A6YWX2 117 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Hspe1Q64433 102 aaKnown RBP12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Usmg5Q78IK2 58 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Pcm1Q9R0L6 2025 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 B1ARW8 110 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Wdr86D3Z757 380 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Fam241aQ9CZL2 131 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Crybb3Q9JJU9 211 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Gm45717A0A1B0GT68 152 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Gm11020F6ZGD5 61 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Smlr1J3QMJ4 66 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Efnb3O35393 340 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Gm11110Q3U4K9 109 aa12.59□□□□□ -0.39
Atg4d-201ENSMUST00000065005 Pax1P09084 446 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trbv1A0A0B4J1G7 116 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 P01741 114 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Cks1bP61025 79 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Znf319Q9ERR8 581 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Dock11A2AF47 2073 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Defa2P28309 93 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 NrtnP97463 195 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Foxg1Q60987 481 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm20854Q62461 227 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Iba57Q8CAK1 358 aaKnown RBP12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Phpt1Q9DAK9 124 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Cd200r1Q9ES57 326 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Igkv1-99F6XWB2 120 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Saa3P04918 122 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 PlnP61014 52 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav3-3Q5R1C3 114 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Nrn1Q8CFV4 142 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ormdl2Q9CQZ0 153 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6n-5A0A075B621 112 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6-5A0A075B6B5 112 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Leap2Q91V13 76 aa12.58□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Frem3Q5H8B9 2123 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav4-4-dv10A0A075B651 110 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Spock3Q8BKV0 436 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ighv1-81A0A075B5Y4 117 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gpr82Q8BZR0 328 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav19A0A0B4J1K4 119 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 P01726 129 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Jsrp1Q3MI48 332 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Bud31Q6PGH1 103 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm933J3QPC1 141 aa12.57□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trbv13-3A0A0B4J1H2 113 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Igkv4-51A0N8I8 119 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Zfp36l2P23949 484 aaKnown RBP12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Defb30Q30KN4 75 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm94Q3V2D2 93 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 AgaQ64191 346 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 MturnQ8CGA4 131 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Igkv4-90A0A075B5L3 117 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6-4A0A075B6B4 115 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Tmem8bB1AWJ5 472 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 ApohQ01339 345 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 C1ql4Q4ZJM9 238 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Znf329Q6GQR8 522 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Cdcp2Q8BQH6 427 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 GrhprQ91Z53 328 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Cacna1aP97445 2368 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ly6g6fB2RXM6 300 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 TtrP07309 147 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Sh3bgrl3Q91VW3 93 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Nrxn2E9Q7X7 1710 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Defb26Q30KN7 186 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Tmem241Q3UME2 297 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 5730522E02RikQ5SP45 163 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6-1A0A075B5Z8 112 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm43517E9PYS1 339 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm2564F6Z9S8 108 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ccl19O70460 108 aa12.56□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trbv12-1A0A0B4J1H0 124 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Mrps21P58059 87 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Znf474Q6V5K9 347 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Anapc13Q8R034 74 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6d-3A0A075B6B3 112 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Lgals6O54891 301 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav6-3Q5R1E6 112 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ube2d2bQ6ZWY6 147 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm44973A0A140LJJ1 189 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 PpyP10601 100 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 OstcQ78XF5 149 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 ArtnQ9Z0L2 224 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Trav16d-dv11A0A075B617 117 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Esp24A8R0V6 68 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Ifitm5O88728 134 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 ElnP54320 860 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Olfr33Q8VGX7 318 aa12.55□□□□□ -0.4
Atg4d-201ENSMUST00000065005 Gm7075D3Z497 112 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 64.4 ms