Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Gm25239-201ENSMUST00000174915 86 ntBASIC31.06■■■□□ 2.56
Gm11110Q3U4K9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Gm11110Q3U4K9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Gm11110Q3U4K9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Gm11110Q3U4K9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Gm11110Q3U4K9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm11110Q3U4K9 Gm15042-201ENSMUST00000120212 883 ntBASIC27.7■■■□□ 2.02
Gm11110Q3U4K9 Psd-208ENSMUST00000224556 2034 ntBASIC27.58■■■□□ 2.01
Gm11110Q3U4K9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Gm11110Q3U4K9 Gm15045-201ENSMUST00000117359 883 ntBASIC27.2■■□□□ 1.94
Gm11110Q3U4K9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Gm11110Q3U4K9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Gm11110Q3U4K9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.87■■□□□ 1.89
Gm11110Q3U4K9 Gm24109-201ENSMUST00000175489 103 ntBASIC26.69■■□□□ 1.86
Gm11110Q3U4K9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Gm11110Q3U4K9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Gm11110Q3U4K9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Gm11110Q3U4K9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Gm11110Q3U4K9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Gm11110Q3U4K9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Gm11110Q3U4K9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Gm11110Q3U4K9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Gm11110Q3U4K9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Gm11110Q3U4K9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Gm11110Q3U4K9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Gm11110Q3U4K9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.16■■□□□ 1.78
Gm11110Q3U4K9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Gm11110Q3U4K9 Gm23366-201ENSMUST00000175022 89 ntBASIC26.01■■□□□ 1.75
Gm11110Q3U4K9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Gm11110Q3U4K9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Gm11110Q3U4K9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Gm11110Q3U4K9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.9■■□□□ 1.74
Gm11110Q3U4K9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Gm11110Q3U4K9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Gm11110Q3U4K9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Gm11110Q3U4K9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Gm11110Q3U4K9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Gm11110Q3U4K9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm11110Q3U4K9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm11110Q3U4K9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Gm11110Q3U4K9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.44■■□□□ 1.66
Gm11110Q3U4K9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Gm11110Q3U4K9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.41■■□□□ 1.66
Gm11110Q3U4K9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.35■■□□□ 1.65
Gm11110Q3U4K9 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.27■■□□□ 1.64
Gm11110Q3U4K9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm11110Q3U4K9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Gm11110Q3U4K9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Gm11110Q3U4K9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Gm11110Q3U4K9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Gm11110Q3U4K9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Gm11110Q3U4K9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Gm11110Q3U4K9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Gm11110Q3U4K9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Gm11110Q3U4K9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.69■■□□□ 1.54
Gm11110Q3U4K9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gm11110Q3U4K9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm11110Q3U4K9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.62■■□□□ 1.53
Gm11110Q3U4K9 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.58■■□□□ 1.52
Gm11110Q3U4K9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.56■■□□□ 1.52
Gm11110Q3U4K9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Gm11110Q3U4K9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Gm11110Q3U4K9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Gm11110Q3U4K9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm11110Q3U4K9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm11110Q3U4K9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm11110Q3U4K9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm11110Q3U4K9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Gm11110Q3U4K9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.39■■□□□ 1.5
Gm11110Q3U4K9 Gm27325-201ENSMUST00000175467 74 ntBASIC24.39■■□□□ 1.49
Gm11110Q3U4K9 Gm25238-201ENSMUST00000174914 89 ntBASIC24.34■■□□□ 1.49
Gm11110Q3U4K9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Gm11110Q3U4K9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm11110Q3U4K9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Gm11110Q3U4K9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
Gm11110Q3U4K9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Gm11110Q3U4K9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Gm11110Q3U4K9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.24■■□□□ 1.47
Gm11110Q3U4K9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm11110Q3U4K9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Gm11110Q3U4K9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11110Q3U4K9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm11110Q3U4K9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Gm11110Q3U4K9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.13■■□□□ 1.45
Gm11110Q3U4K9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Gm11110Q3U4K9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Gm11110Q3U4K9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Gm11110Q3U4K9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Gm11110Q3U4K9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Gm11110Q3U4K9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24■■□□□ 1.43
Gm11110Q3U4K9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Gm11110Q3U4K9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Gm11110Q3U4K9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
Gm11110Q3U4K9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Gm11110Q3U4K9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm11110Q3U4K9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.9■■□□□ 1.42
Gm11110Q3U4K9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Gm11110Q3U4K9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Gm11110Q3U4K9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Gm11110Q3U4K9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms