RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SPINK13Q1W4C9 94 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 IGFL4Q6B9Z1 124 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 ZNF876PQ49A33 203 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 TRGV4A0A0C4DH28 118 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 TRBV10-1A0A0K0K1A3 114 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 LINC00310P59036 64 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 APRG1Q8IVJ8 170 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 TMEM61Q8N0U2 210 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 SMIM2Q9BVW6 85 aa4.49□□□□□ -1.69
SEC22A-201ENST00000309934 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 TRAV26-2A0A0B4J265 109 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 SOCS3O14543 225 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 PRIMA1Q86XR5 153 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 SLC25A29Q8N8R3 303 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 GHRHP01286 108 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 CFC1BP0CG36 223 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 CFC1P0CG37 223 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 TMEM263Q8WUH6 116 aaKnown RBP4.48□□□□□ -1.69
SEC22A-201ENST00000309934 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 A8MZ25 164 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 DAZ2Q13117 558 aaKnown RBP4.48□□□□□ -1.69
SEC22A-201ENST00000309934 DAZ4Q86SG3 579 aaKnown RBP4.48□□□□□ -1.69
SEC22A-201ENST00000309934 DAZ3Q9NR90 486 aaKnown RBP4.48□□□□□ -1.69
SEC22A-201ENST00000309934 U3KQK5 164 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 HECTD1Q9ULT8 2610 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 TRBV10-2A0A0K0K1G8 114 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 ZFAND2AQ8N6M9 145 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 ZMAT4Q9H898 229 aa4.48□□□□□ -1.69
SEC22A-201ENST00000309934 PRAC2D3DTV9 90 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 FHL3Q13643 280 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
SEC22A-201ENST00000309934 HIVEP3Q5T1R4 2406 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 TRGV1A0A0A0MS02 117 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 INAFM1C9JVW0 142 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 CRYGDP07320 174 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 RPL18AQ02543 176 aaKnown RBP4.47□□□□□ -1.69
SEC22A-201ENST00000309934 PAX4O43316 350 aa4.47□□□□□ -1.69
SEC22A-201ENST00000309934 ZNF625Q96I27 306 aaPredicted RBP4.47□□□□□ -1.69
SEC22A-201ENST00000309934 ZNF292O60281 2723 aa4.46□□□□□ -1.69
SEC22A-201ENST00000309934 H7C423 109 aa4.46□□□□□ -1.69
SEC22A-201ENST00000309934 PROK1P58294 105 aa4.46□□□□□ -1.69
SEC22A-201ENST00000309934 DEFB136Q30KP8 78 aa4.46□□□□□ -1.69
SEC22A-201ENST00000309934 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
SEC22A-201ENST00000309934 IGLV1-51P01701 117 aa4.46□□□□□ -1.7
SEC22A-201ENST00000309934 CRYGAP11844 174 aa4.46□□□□□ -1.7
SEC22A-201ENST00000309934 MRPL35Q9NZE8 188 aaKnown RBP4.46□□□□□ -1.7
SEC22A-201ENST00000309934 MED13LQ71F56 2210 aa4.46□□□□□ -1.7
SEC22A-201ENST00000309934 SETXQ7Z333 2677 aaKnown RBP4.46□□□□□ -1.7
SEC22A-201ENST00000309934 TRAV12-1A0A0B4J245 112 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 TRBV6-5A0A0K0K1A5 114 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
SEC22A-201ENST00000309934 XCL2Q9UBD3 114 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 NXPH4O95158 308 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 SDIM1Q6ZPB5 146 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 KRTAP1-3Q8IUG1 177 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.45□□□□□ -1.71e-6■■■■■ 33.5
SEC22A-201ENST00000309934 IGKV3D-20A0A0C4DH25 116 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 SPRY2O43597 315 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
SEC22A-201ENST00000309934 WNK2Q9Y3S1 2297 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 TRAV23DV6A0A075B6W5 121 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 Q6ZS46 218 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 SPART-AS1P0CW21 52 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 MIFP14174 115 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 PRRC2AP48634 2157 aaKnown RBP4.44□□□□□ -1.7
SEC22A-201ENST00000309934 LOC400499M0QZD8 3231 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 ABCA1O95477 2261 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 CRIP1P50238 77 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 C2orf66Q6UXQ4 117 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 HHLA3Q9XRX5 114 aa4.44□□□□□ -1.7
SEC22A-201ENST00000309934 VPS13AQ96RL7 3174 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 K7EQD1 137 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 GNRH2O43555 120 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 ZNF80P51504 273 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-201ENST00000309934 KRTAP21-3Q3LHN1 58 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 A8MTW9 85 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 ADARB2-AS1A8MUL3 147 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 MRPS36P82909 103 aaKnown RBP4.43□□□□□ -1.7
SEC22A-201ENST00000309934 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
SEC22A-201ENST00000309934 MUSTN1Q8IVN3 82 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 LINC00482Q8N8I6 264 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 TNCP24821 2201 aa4.43□□□□□ -1.7
SEC22A-201ENST00000309934 PRB2P02812 416 aaPredicted RBP4.42□□□□□ -1.7
SEC22A-201ENST00000309934 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
SEC22A-201ENST00000309934 HAMPP81172 84 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 TET2Q6N021 2002 aaPredicted RBP4.42□□□□□ -1.7
SEC22A-201ENST00000309934 F8VRH5 84 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 SMKR1H3BMG3 65 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 TOMM6Q96B49 74 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
SEC22A-201ENST00000309934 A0A087WWL8 130 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms