RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	YEF3	P16521	1044 aa	Known RBP	4.65	□□□□□ -1.67
FDH1	YOR388C	MDM10	P18409	493 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	STE4	P18851	423 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	YMC1	P32331	307 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	ORC2	P32833	620 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	FPR3	P38911	411 aa	Known RBP	4.65	□□□□□ -1.67
FDH1	YOR388C	OAF1	P39720	1047 aa	Predicted RBP	4.65	□□□□□ -1.67
FDH1	YOR388C	TMN3	P40071	706 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	THI6	P41835	540 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	HFD1	Q04458	532 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	HIM1	Q06674	414 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	YGR161W-C	Q3E744	92 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	RSF2	P46974	1380 aa		4.65	□□□□□ -1.67
FDH1	YOR388C	CDS1	P38221	457 aa		4.64	□□□□□ -1.67
FDH1	YOR388C	OPY1	P38271	328 aa		4.64	□□□□□ -1.67
FDH1	YOR388C	GPP1	P41277	250 aa	Known RBP	4.64	□□□□□ -1.67
FDH1	YOR388C	GPG1	P53130	126 aa		4.64	□□□□□ -1.67
FDH1	YOR388C	CEF1	Q03654	590 aa	Predicted RBP	4.64	□□□□□ -1.67
FDH1	YOR388C	YHM2	Q04013	314 aa		4.64	□□□□□ -1.67
FDH1	YOR388C	HLR1	Q04429	423 aa		4.64	□□□□□ -1.67
FDH1	YOR388C	GLN4	P13188	809 aa	Known RBP	4.63	□□□□□ -1.67
FDH1	YOR388C	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	CRG1	P38892	291 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
FDH1	YOR388C	FTR1	P40088	404 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	YGL117W	P53133	265 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	PDS5	Q04264	1277 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	ARG7	Q04728	441 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	ULA1	Q12059	462 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	YRF1-4	O13559	1382 aa		4.63	□□□□□ -1.67
FDH1	YOR388C	ROM2	P51862	1356 aa	Known RBP	4.63	□□□□□ -1.67
FDH1	YOR388C	TY4B-H	P0C2J7	1802 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	TY4B-J	P47024	1803 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	RPS21A	P0C0V8	87 aa	Known RBP	4.62	□□□□□ -1.67
FDH1	YOR388C	CLC1	P17891	233 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
FDH1	YOR388C	PPE1	P38796	400 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	PRM2	P40534	656 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	SNM1	P40993	198 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	CPR8	P53728	308 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	ADE16	P54113	591 aa	Known RBP	4.62	□□□□□ -1.67
FDH1	YOR388C	PTA1	Q01329	785 aa	Predicted RBP	4.62	□□□□□ -1.67
FDH1	YOR388C	FMP30	Q02883	468 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	EFR3	Q03653	782 aa	Known RBP	4.62	□□□□□ -1.67
FDH1	YOR388C	SEG1	Q04279	960 aa		4.62	□□□□□ -1.67
FDH1	YOR388C	DUR1,2	P32528	1835 aa	Known RBP	4.61	□□□□□ -1.67
FDH1	YOR388C	CDC26	P14724	124 aa		4.61	□□□□□ -1.67
FDH1	YOR388C	MF(ALPHA)2	P32435	120 aa		4.61	□□□□□ -1.67
FDH1	YOR388C	PIH1	P38768	344 aa		4.61	□□□□□ -1.67
FDH1	YOR388C	VID28	P40547	921 aa		4.61	□□□□□ -1.67
FDH1	YOR388C	ENP2	P48234	707 aa	Known RBP	4.61	□□□□□ -1.67
FDH1	YOR388C	NUP145	P49687	1317 aa		4.61	□□□□□ -1.67
FDH1	YOR388C	MRPL7	P36519	292 aa		4.6	□□□□□ -1.67
FDH1	YOR388C	YGR237C	P50089	785 aa		4.6	□□□□□ -1.67
FDH1	YOR388C	YGR054W	P53235	642 aa	Known RBP	4.6	□□□□□ -1.67
FDH1	YOR388C	TRS23	Q03784	219 aa		4.6	□□□□□ -1.67
FDH1	YOR388C	RIM13	Q03792	727 aa		4.6	□□□□□ -1.67
FDH1	YOR388C	AFT2	Q08957	416 aa		4.6	□□□□□ -1.67
FDH1	YOR388C	FAP7	Q12055	197 aa	Predicted RBP	4.6	□□□□□ -1.67
FDH1	YOR388C	TUP1	P16649	713 aa		4.59	□□□□□ -1.67
FDH1	YOR388C	CNE1	P27825	502 aa		4.59	□□□□□ -1.67
FDH1	YOR388C	URB1	P34241	1764 aa	Known RBP	4.59	□□□□□ -1.67
FDH1	YOR388C	FUN12	P39730	1002 aa	Known RBP	4.59	□□□□□ -1.67
FDH1	YOR388C	PAP2	P53632	584 aa	Known RBP	4.59	□□□□□ -1.67
FDH1	YOR388C	TIM50	Q02776	476 aa		4.59	□□□□□ -1.67
FDH1	YOR388C	AIM41	Q12032	185 aa		4.59	□□□□□ -1.67
FDH1	YOR388C	AUS1	Q08409	1394 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	PGK1	P00560	416 aa	Known RBP	4.58	□□□□□ -1.68
FDH1	YOR388C	OSM1	P21375	501 aa	Known RBP	4.58	□□□□□ -1.68
FDH1	YOR388C	AAD3	P25612	363 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	MTC7	P32633	139 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	GRX4	P32642	244 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	DHR2	P36009	735 aa	Predicted RBP	4.58	□□□□□ -1.68
FDH1	YOR388C	YHR033W	P38690	423 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	YIP4	P53093	235 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	TAP42	Q04372	366 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	ARR3	Q06598	404 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	ZPS1	Q12512	249 aa		4.58	□□□□□ -1.68
FDH1	YOR388C	RPO41	P13433	1351 aa	Known RBP	4.57	□□□□□ -1.68
FDH1	YOR388C	EDE1	P34216	1381 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	ERG11	P10614	530 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	PMA2	P19657	947 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	DGR2	P32330	852 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	YEL025C	P39991	1188 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	LRO1	P40345	661 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	YFR016C	P43597	1233 aa	Known RBP	4.57	□□□□□ -1.68
FDH1	YOR388C	TAX4	P47030	604 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	TCB2	P48231	1178 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	MFM1	Q02783	413 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	YCG1	Q06680	1035 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	YDL073W	Q07454	984 aa		4.57	□□□□□ -1.68
FDH1	YOR388C	TUF1	P02992	437 aa	Known RBP	4.56	□□□□□ -1.68
FDH1	YOR388C	CPA2	P03965	1118 aa	Known RBP	4.56	□□□□□ -1.68
FDH1	YOR388C	CAP1	P28495	268 aa	Known RBP	4.56	□□□□□ -1.68
FDH1	YOR388C	HSP104	P31539	908 aa	Known RBP	4.56	□□□□□ -1.68
FDH1	YOR388C	RIM4	P38741	713 aa		4.56	□□□□□ -1.68
FDH1	YOR388C	LTP1	P40347	161 aa		4.56	□□□□□ -1.68
FDH1	YOR388C	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
FDH1	YOR388C	YDL183C	P48569	320 aa		4.56	□□□□□ -1.68
FDH1	YOR388C	COQ6	P53318	479 aa		4.56	□□□□□ -1.68
FDH1	YOR388C	YNL018C	P53976	612 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms