RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W WAR1Q03631 944 aa5.11□□□□□ -1.59
RCL1YOL010W TIF35Q04067 274 aaKnown RBP5.11□□□□□ -1.59
RCL1YOL010W PRM6Q04705 352 aa5.11□□□□□ -1.59
RCL1YOL010W CDD1Q06549 142 aa5.11□□□□□ -1.59
RCL1YOL010W YOR389WQ08912 624 aa5.11□□□□□ -1.59
RCL1YOL010W YPL278CQ08990 100 aa5.11□□□□□ -1.59
RCL1YOL010W SUL2Q12325 893 aa5.11□□□□□ -1.59
RCL1YOL010W POL2P21951 2222 aaKnown RBP5.1□□□□□ -1.59
RCL1YOL010W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
RCL1YOL010W RPC53P25441 422 aa5.1□□□□□ -1.59
RCL1YOL010W BRN1P38170 754 aa5.1□□□□□ -1.59
RCL1YOL010W OPY1P38271 328 aa5.1□□□□□ -1.59
RCL1YOL010W CCZ1P38273 704 aa5.1□□□□□ -1.59
RCL1YOL010W YHR054CP38780 354 aa5.1□□□□□ -1.59
RCL1YOL010W SPO22P40511 975 aa5.1□□□□□ -1.59
RCL1YOL010W SEC26P41810 973 aaKnown RBP5.1□□□□□ -1.59
RCL1YOL010W SCD6P45978 349 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
RCL1YOL010W MNN10P50108 393 aaKnown RBP5.1□□□□□ -1.59
RCL1YOL010W NRM1P53718 249 aa5.1□□□□□ -1.59
RCL1YOL010W TOF2Q02208 771 aa5.1□□□□□ -1.59
RCL1YOL010W VTC3Q02725 835 aa5.1□□□□□ -1.59
RCL1YOL010W YLR456WQ06199 204 aa5.1□□□□□ -1.59
RCL1YOL010W NTO1Q12311 748 aa5.1□□□□□ -1.59
RCL1YOL010W HRP1Q99383 534 aaKnown RBP5.1□□□□□ -1.59
RCL1YOL010W RAD3P06839 778 aa5.09□□□□□ -1.59
RCL1YOL010W THR4P16120 514 aaKnown RBP5.09□□□□□ -1.59
RCL1YOL010W MET4P32389 672 aa5.09□□□□□ -1.59
RCL1YOL010W VPS35P34110 944 aa5.09□□□□□ -1.59
RCL1YOL010W LST4P34239 828 aa5.09□□□□□ -1.59
RCL1YOL010W PTI1P39927 425 aaPredicted RBP5.09□□□□□ -1.59
RCL1YOL010W LTP1P40347 161 aa5.09□□□□□ -1.59
RCL1YOL010W NUP84P52891 726 aa5.09□□□□□ -1.59
RCL1YOL010W SHE10P53075 577 aa5.09□□□□□ -1.59
RCL1YOL010W NOP13P53883 403 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
RCL1YOL010W ARP5P53946 755 aa5.09□□□□□ -1.59
RCL1YOL010W ARK1P53974 638 aa5.09□□□□□ -1.59
RCL1YOL010W SPO21Q12411 609 aa5.09□□□□□ -1.59
RCL1YOL010W SSB1P11484 613 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W PTP1P25044 335 aa5.08□□□□□ -1.6
RCL1YOL010W SWI4P25302 1093 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W CDC20P26309 610 aa5.08□□□□□ -1.6
RCL1YOL010W PMI40P29952 429 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W TKL2P33315 681 aa5.08□□□□□ -1.6
RCL1YOL010W ERV46P39727 415 aa5.08□□□□□ -1.6
RCL1YOL010W SSB2P40150 613 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W TIF34P40217 347 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W COQ6P53318 479 aa5.08□□□□□ -1.6
RCL1YOL010W CEG1Q01159 459 aaPredicted RBP5.08□□□□□ -1.6
RCL1YOL010W RSB1Q08417 382 aa5.08□□□□□ -1.6
RCL1YOL010W SLK19Q08581 821 aaKnown RBP5.08□□□□□ -1.6
RCL1YOL010W GPM2Q12008 311 aa5.08□□□□□ -1.6
RCL1YOL010W SMC6Q12749 1114 aa5.08□□□□□ -1.6
RCL1YOL010W GAL4P04386 881 aa5.07□□□□□ -1.6
RCL1YOL010W VMA4P22203 233 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W TOA1P32773 286 aa5.07□□□□□ -1.6
RCL1YOL010W BMH2P34730 273 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W SHE3P38272 425 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W ATG12P38316 186 aa5.07□□□□□ -1.6
RCL1YOL010W SIP3P38717 1229 aa5.07□□□□□ -1.6
RCL1YOL010W PIH1P38768 344 aa5.07□□□□□ -1.6
RCL1YOL010W PFS1P38872 237 aa5.07□□□□□ -1.6
RCL1YOL010W SAH1P39954 449 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W NPA3P47122 385 aa5.07□□□□□ -1.6
RCL1YOL010W ASN1P49089 572 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W PHO23P50947 330 aa5.07□□□□□ -1.6
RCL1YOL010W NPY1P53164 384 aa5.07□□□□□ -1.6
RCL1YOL010W FUS2Q05670 677 aa5.07□□□□□ -1.6
RCL1YOL010W YCS4Q06156 1176 aa5.07□□□□□ -1.6
RCL1YOL010W RXT3Q07458 294 aa5.07□□□□□ -1.6
RCL1YOL010W RLP24Q07915 199 aaKnown RBP5.07□□□□□ -1.6
RCL1YOL010W GPR1Q12361 961 aa5.07□□□□□ -1.6
RCL1YOL010W GAL10P04397 699 aa5.06□□□□□ -1.6
RCL1YOL010W RPL43AP0CX25 92 aaKnown RBP5.06□□□□□ -1.6
RCL1YOL010W RPL43BP0CX26 92 aa5.06□□□□□ -1.6
RCL1YOL010W RPL1AP0CX43 217 aaKnown RBP5.06□□□□□ -1.6
RCL1YOL010W RPL1BP0CX44 217 aaKnown RBP5.06□□□□□ -1.6
RCL1YOL010W ASP3-2P0CX77 362 aa5.06□□□□□ -1.6
RCL1YOL010W ASP3-3P0CX78 362 aa5.06□□□□□ -1.6
RCL1YOL010W ASP3-4P0CX79 362 aa5.06□□□□□ -1.6
RCL1YOL010W ASP3-1P0CZ17 362 aa5.06□□□□□ -1.6
RCL1YOL010W ERG6P25087 383 aaKnown RBP5.06□□□□□ -1.6
RCL1YOL010W STE13P33894 931 aa5.06□□□□□ -1.6
RCL1YOL010W YBR225WP38321 900 aa5.06□□□□□ -1.6
RCL1YOL010W CHS7P38843 316 aa5.06□□□□□ -1.6
RCL1YOL010W STT3P39007 718 aaKnown RBP5.06□□□□□ -1.6
RCL1YOL010W HEM14P40012 539 aa5.06□□□□□ -1.6
RCL1YOL010W ASG1P40467 964 aa5.06□□□□□ -1.6
RCL1YOL010W EPL1P43572 832 aa5.06□□□□□ -1.6
RCL1YOL010W COQ5P49017 307 aa5.06□□□□□ -1.6
RCL1YOL010W CMP2P14747 604 aa5.05□□□□□ -1.6
RCL1YOL010W ASF1P32447 279 aa5.05□□□□□ -1.6
RCL1YOL010W YSC83P32792 385 aa5.05□□□□□ -1.6
RCL1YOL010W AGP2P38090 596 aa5.05□□□□□ -1.6
RCL1YOL010W AVT2P39981 480 aa5.05□□□□□ -1.6
RCL1YOL010W SHQ1P40486 507 aaPredicted RBP5.05□□□□□ -1.6
RCL1YOL010W YKE2P52553 114 aa5.05□□□□□ -1.6
RCL1YOL010W VEL1P53058 206 aa5.05□□□□□ -1.6
RCL1YOL010W HXT17P53631 564 aa5.05□□□□□ -1.6
RCL1YOL010W TSR1Q07381 788 aaKnown RBP5.05□□□□□ -1.6
RCL1YOL010W GPB1Q08886 897 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms