RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeast

Gene SSU72, Length 621 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSU72	YNL222W	EXO1	P39875	702 aa		5.05	□□□□□ -1.6
SSU72	YNL222W	LTP1	P40347	161 aa		5.05	□□□□□ -1.6
SSU72	YNL222W	PET309	P32522	965 aa	Predicted RBP	5.04	□□□□□ -1.6
SSU72	YNL222W	PAF1	P38351	445 aa		5.04	□□□□□ -1.6
SSU72	YNL222W	NET1	P47035	1189 aa		5.04	□□□□□ -1.6
SSU72	YNL222W	ORM2	Q06144	216 aa		5.04	□□□□□ -1.6
SSU72	YNL222W	DIN7	Q12086	430 aa		5.04	□□□□□ -1.6
SSU72	YNL222W	AAC1	P04710	309 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	CDC5	P32562	705 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	YIL092W	P40497	633 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	GLO1	P50107	326 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	FOL1	P53848	824 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	SLX4	Q12098	748 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	PSF3	Q12146	194 aa		5.03	□□□□□ -1.6
SSU72	YNL222W	TDA10	P42938	290 aa		5.02	□□□□□ -1.61
SSU72	YNL222W	YNL092W	P53934	400 aa		5.02	□□□□□ -1.61
SSU72	YNL222W	IRC3	Q06683	689 aa		5.02	□□□□□ -1.61
SSU72	YNL222W	YAP7	Q08182	245 aa		5.02	□□□□□ -1.61
SSU72	YNL222W	ICT1	Q12385	394 aa		5.02	□□□□□ -1.61
SSU72	YNL222W	AHA1	Q12449	350 aa	Known RBP	5.02	□□□□□ -1.61
SSU72	YNL222W	GDA1	P32621	518 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	TMT1	P32643	299 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	BEM3	P32873	1128 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	SDH8	P38345	138 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	ULP2	P40537	1034 aa	Predicted RBP	5.01	□□□□□ -1.61
SSU72	YNL222W	OPT1	P40897	799 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	GSM1	P42950	618 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	BST1	P43571	1029 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	COS12	P53053	380 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	CRT10	Q08226	957 aa		5.01	□□□□□ -1.61
SSU72	YNL222W	DBP10	Q12389	995 aa	Known RBP	5.01	□□□□□ -1.61
SSU72	YNL222W	SSB1	P11484	613 aa	Known RBP	5	□□□□□ -1.61
SSU72	YNL222W	PHO3	P24031	467 aa		5	□□□□□ -1.61
SSU72	YNL222W	GSY2	P27472	705 aa		5	□□□□□ -1.61
SSU72	YNL222W	APD1	P38281	316 aa		5	□□□□□ -1.61
SSU72	YNL222W	SSP120	P39931	234 aa	Known RBP	5	□□□□□ -1.61
SSU72	YNL222W	SSB2	P40150	613 aa	Known RBP	5	□□□□□ -1.61
SSU72	YNL222W	NUR1	Q12066	484 aa		5	□□□□□ -1.61
SSU72	YNL222W	CBP3	P21560	335 aa		4.99	□□□□□ -1.61
SSU72	YNL222W	MRC1	P25588	1096 aa		4.99	□□□□□ -1.61
SSU72	YNL222W	YJU2	P28320	278 aa	Predicted RBP	4.99	□□□□□ -1.61
SSU72	YNL222W	SCS2	P40075	244 aa	Known RBP	4.99	□□□□□ -1.61
SSU72	YNL222W	STP1	Q00947	519 aa		4.99	□□□□□ -1.61
SSU72	YNL222W	YML119W	Q03208	357 aa		4.99	□□□□□ -1.61
SSU72	YNL222W	BSP1	Q06604	576 aa		4.99	□□□□□ -1.61
SSU72	YNL222W	PRS5	Q12265	496 aa	Known RBP	4.99	□□□□□ -1.61
SSU72	YNL222W	RDL1	Q12305	139 aa	Known RBP	4.99	□□□□□ -1.61
SSU72	YNL222W	PSA1	P41940	361 aa	Known RBP	4.98	□□□□□ -1.61
SSU72	YNL222W	GAT1	P43574	510 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	SAE2	P46946	345 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	BPL1	P48445	690 aa	Predicted RBP	4.98	□□□□□ -1.61
SSU72	YNL222W	SEC5	P89102	971 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	RAD33	Q04231	177 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	CYK3	Q07533	885 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	YLR111W	Q12528	110 aa		4.98	□□□□□ -1.61
SSU72	YNL222W	TGL1	P34163	548 aa		4.97	□□□□□ -1.61
SSU72	YNL222W	IDS2	P46958	469 aa		4.97	□□□□□ -1.61
SSU72	YNL222W	NMD5	P46970	1048 aa		4.97	□□□□□ -1.61
SSU72	YNL222W	HRD3	Q05787	833 aa		4.97	□□□□□ -1.61
SSU72	YNL222W	AMD2	P22580	549 aa		4.96	□□□□□ -1.62
SSU72	YNL222W	PRE2	P30656	287 aa	Known RBP	4.96	□□□□□ -1.62
SSU72	YNL222W	MTG2	P38860	518 aa		4.96	□□□□□ -1.62
SSU72	YNL222W	RSC9	Q03124	581 aa		4.96	□□□□□ -1.62
SSU72	YNL222W	ENT2	Q05785	613 aa		4.96	□□□□□ -1.62
SSU72	YNL222W	RGT2	Q12300	763 aa		4.96	□□□□□ -1.62
SSU72	YNL222W	URE2	P23202	354 aa	Known RBP	4.95	□□□□□ -1.62
SSU72	YNL222W	RPS7A	P26786	190 aa	Known RBP	4.95	□□□□□ -1.62
SSU72	YNL222W	SAW1	P39735	261 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	IMA5	P40884	581 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	SNO3	P43544	222 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	YNL034W	P53963	612 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	ERG13	P54839	491 aa	Known RBP	4.95	□□□□□ -1.62
SSU72	YNL222W	ACS1	Q01574	713 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	UBP16	Q02863	499 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	YPL071C	Q02864	156 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	TRS31	Q03337	283 aa		4.95	□□□□□ -1.62
SSU72	YNL222W	SPN1	Q06505	410 aa	Predicted RBP	4.95	□□□□□ -1.62
SSU72	YNL222W	VAS1	P07806	1104 aa	Known RBP	4.94	□□□□□ -1.62
SSU72	YNL222W	ADH4	P10127	382 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	RRP43	P25359	394 aa	Predicted RBP	4.94	□□□□□ -1.62
SSU72	YNL222W	LNP1	P38878	278 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	VFA1	P40080	203 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	COG2	P53271	262 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	TRI1	Q05024	226 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	Q0010	Q9ZZX9	128 aa		4.94	□□□□□ -1.62
SSU72	YNL222W	BI2	P03873	423 aa		4.93	□□□□□ -1.62
SSU72	YNL222W	YCR061W	P25639	631 aa		4.93	□□□□□ -1.62
SSU72	YNL222W	PRP45	P28004	379 aa	Predicted RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	ECM32	P32644	1121 aa	Known RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	ARO9	P38840	513 aa	Predicted RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	PUS4	P48567	403 aa	Known RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	CNM67	P53865	581 aa	Known RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	TPO3	Q06451	622 aa		4.93	□□□□□ -1.62
SSU72	YNL222W	YER175W-A	Q8TGU4	54 aa		4.93	□□□□□ -1.62
SSU72	YNL222W	PNO1	Q99216	274 aa	Known RBP	4.93	□□□□□ -1.62
SSU72	YNL222W	CHO2	P05374	869 aa	Known RBP	4.92	□□□□□ -1.62
SSU72	YNL222W	SDS22	P36047	338 aa		4.92	□□□□□ -1.62
SSU72	YNL222W	VPS8	P39702	1274 aa		4.92	□□□□□ -1.62
SSU72	YNL222W	MAM1	P40065	302 aa		4.92	□□□□□ -1.62
SSU72	YNL222W	POL31	P46957	487 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 110 ms