RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C OM45P16547 393 aa3.42□□□□□ -1.86
YIR040CYIR040C PRP28P23394 588 aa3.42□□□□□ -1.86
YIR040CYIR040C SED4P25365 1065 aa3.42□□□□□ -1.86
YIR040CYIR040C MGM1P32266 881 aa3.42□□□□□ -1.86
YIR040CYIR040C DBF4P32325 704 aa3.42□□□□□ -1.86
YIR040CYIR040C IMP2'P32351 346 aa3.42□□□□□ -1.86
YIR040CYIR040C EUG1P32474 517 aa3.42□□□□□ -1.86
YIR040CYIR040C YEL043WP32618 956 aa3.42□□□□□ -1.86
YIR040CYIR040C RPC34P32910 317 aa3.42□□□□□ -1.86
YIR040CYIR040C PMT1P33775 817 aa3.42□□□□□ -1.86
YIR040CYIR040C STV1P37296 890 aa3.42□□□□□ -1.86
YIR040CYIR040C MAK5P38112 773 aaPredicted RBP3.42□□□□□ -1.86
YIR040CYIR040C TAF5P38129 798 aa3.42□□□□□ -1.86
YIR040CYIR040C FTH1P38310 465 aa3.42□□□□□ -1.86
YIR040CYIR040C LRP1P38801 184 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C STN1P38960 494 aa3.42□□□□□ -1.86
YIR040CYIR040C SEC31P38968 1273 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C SDP1P40479 209 aa3.42□□□□□ -1.86
YIR040CYIR040C YIR014WP40570 242 aa3.42□□□□□ -1.86
YIR040CYIR040C MKT1P40850 830 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C GYP8P43570 497 aa3.42□□□□□ -1.86
YIR040CYIR040C URB2P47108 1174 aa3.42□□□□□ -1.86
YIR040CYIR040C BUL1P48524 976 aa3.42□□□□□ -1.86
YIR040CYIR040C KAP114P53067 1004 aa3.42□□□□□ -1.86
YIR040CYIR040C YKR011CQ02209 353 aa3.42□□□□□ -1.86
YIR040CYIR040C EGD1Q02642 157 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C RVB1Q03940 463 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C RBS1Q05672 457 aaKnown RBP3.42□□□□□ -1.86
YIR040CYIR040C YLR125WQ12138 136 aa3.42□□□□□ -1.86
YIR040CYIR040C ADF1Q2V2Q1 113 aa3.42□□□□□ -1.86
YIR040CYIR040C YOL087CQ99247 1116 aa3.42□□□□□ -1.86
YIR040CYIR040C RAD9P14737 1309 aa3.42□□□□□ -1.86
YIR040CYIR040C TUS1Q06412 1307 aa3.42□□□□□ -1.86
YIR040CYIR040C PHO8P11491 566 aa3.41□□□□□ -1.86
YIR040CYIR040C MRP7P12687 371 aa3.41□□□□□ -1.86
YIR040CYIR040C PFK1P16861 987 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C MRPS28P21771 286 aa3.41□□□□□ -1.86
YIR040CYIR040C SEC14P24280 304 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C OCA4P25366 362 aa3.41□□□□□ -1.86
YIR040CYIR040C BMH1P29311 267 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C SEC21P32074 935 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C RME1P32338 300 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C ASF2P32448 525 aaPredicted RBP3.41□□□□□ -1.86
YIR040CYIR040C SRB4P32569 687 aa3.41□□□□□ -1.86
YIR040CYIR040C TFB1P32776 642 aa3.41□□□□□ -1.86
YIR040CYIR040C YPT52P36018 234 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C EMC3P36039 253 aa3.41□□□□□ -1.86
YIR040CYIR040C YKL133CP36066 463 aa3.41□□□□□ -1.86
YIR040CYIR040C CUE2P36075 443 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C YKL023WP36103 277 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C OLA1P38219 394 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C OSH3P38713 996 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C RIM4P38741 713 aa3.41□□□□□ -1.86
YIR040CYIR040C CTF8P38877 133 aa3.41□□□□□ -1.86
YIR040CYIR040C MSS4P38994 779 aa3.41□□□□□ -1.86
YIR040CYIR040C NUP82P40368 713 aa3.41□□□□□ -1.86
YIR040CYIR040C INA22P40576 216 aa3.41□□□□□ -1.86
YIR040CYIR040C APS3P47064 194 aa3.41□□□□□ -1.86
YIR040CYIR040C ABM1P47146 123 aa3.41□□□□□ -1.86
YIR040CYIR040C PMT3P47190 753 aa3.41□□□□□ -1.86
YIR040CYIR040C TOM22P49334 152 aa3.41□□□□□ -1.86
YIR040CYIR040C LYS4P49367 693 aaPredicted RBP3.41□□□□□ -1.86
YIR040CYIR040C SAP4P53036 818 aa3.41□□□□□ -1.86
YIR040CYIR040C YGR067CP53243 804 aa3.41□□□□□ -1.86
YIR040CYIR040C SLI1P53304 468 aa3.41□□□□□ -1.86
YIR040CYIR040C YGR283CP53336 341 aaPredicted RBP3.41□□□□□ -1.86
YIR040CYIR040C COP1P53622 1201 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C KIN4Q01919 800 aa3.41□□□□□ -1.86
YIR040CYIR040C YDR131CQ03899 556 aa3.41□□□□□ -1.86
YIR040CYIR040C YLR287CQ05881 355 aa3.41□□□□□ -1.86
YIR040CYIR040C VAC14Q06708 880 aa3.41□□□□□ -1.86
YIR040CYIR040C NEW1Q08972 1196 aaKnown RBP3.41□□□□□ -1.86
YIR040CYIR040C VIK1Q12045 647 aa3.41□□□□□ -1.86
YIR040CYIR040C PUS9Q12069 462 aa3.41□□□□□ -1.86
YIR040CYIR040C SCM3Q12334 223 aa3.41□□□□□ -1.86
YIR040CYIR040C MED4Q12343 284 aa3.41□□□□□ -1.86
YIR040CYIR040C AHC1Q12433 566 aa3.41□□□□□ -1.86
YIR040CYIR040C CFT1Q06632 1357 aaKnown RBP3.4□□□□□ -1.86
YIR040CYIR040C JIP3O13555 125 aa3.4□□□□□ -1.87
YIR040CYIR040C PAB1P04147 577 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
YIR040CYIR040C CDC37P06101 506 aaKnown RBP3.4□□□□□ -1.87
YIR040CYIR040C ERR1P0CX10 437 aa3.4□□□□□ -1.87
YIR040CYIR040C ERR2P0CX11 437 aa3.4□□□□□ -1.87
YIR040CYIR040C BIK1P11709 440 aa3.4□□□□□ -1.87
YIR040CYIR040C PRD1P25375 712 aa3.4□□□□□ -1.87
YIR040CYIR040C YCL002CP25565 263 aa3.4□□□□□ -1.87
YIR040CYIR040C KRE2P27809 442 aa3.4□□□□□ -1.87
YIR040CYIR040C MEI4P29467 408 aa3.4□□□□□ -1.87
YIR040CYIR040C PMI40P29952 429 aaKnown RBP3.4□□□□□ -1.87
YIR040CYIR040C TPS2P31688 896 aaKnown RBP3.4□□□□□ -1.87
YIR040CYIR040C THI4P32318 326 aa3.4□□□□□ -1.87
YIR040CYIR040C TYE7P33122 291 aaPredicted RBP3.4□□□□□ -1.87
YIR040CYIR040C UBP11P36026 717 aa3.4□□□□□ -1.87
YIR040CYIR040C PXL1P36166 706 aa3.4□□□□□ -1.87
YIR040CYIR040C ATP3P38077 311 aaKnown RBP3.4□□□□□ -1.87
YIR040CYIR040C APD1P38281 316 aa3.4□□□□□ -1.87
YIR040CYIR040C IFA38P38286 347 aa3.4□□□□□ -1.87
YIR040CYIR040C MSR1P38714 643 aa3.4□□□□□ -1.87
YIR040CYIR040C ARF3P40994 183 aaRIP-Chip data3.4□□□□□ -1.87not detected
YIR040CYIR040C MSE1P48525 536 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms