RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SMI1P32566 505 aa2.25□□□□□ -2.05
RTT107YHR154W SMY2P32909 740 aaKnown RBP2.25□□□□□ -2.05
RTT107YHR154W MDL1P33310 695 aa2.25□□□□□ -2.05
RTT107YHR154W MDL2P33311 773 aa2.25□□□□□ -2.05
RTT107YHR154W TIF5P38431 405 aaKnown RBP2.25□□□□□ -2.05
RTT107YHR154W AFG3P39925 761 aa2.25□□□□□ -2.05
RTT107YHR154W YEL076CP39971 216 aa2.25□□□□□ -2.05
RTT107YHR154W YFL054CP43549 646 aa2.25□□□□□ -2.05
RTT107YHR154W RMD8P43620 662 aa2.25□□□□□ -2.05
RTT107YHR154W GUP1P53154 560 aa2.25□□□□□ -2.05
RTT107YHR154W YGL082WP53155 381 aa2.25□□□□□ -2.05
RTT107YHR154W ARC35P53731 342 aaKnown RBP2.25□□□□□ -2.05
RTT107YHR154W PRP3Q03338 469 aaPredicted RBP2.25□□□□□ -2.05
RTT107YHR154W DAP1Q12091 152 aa2.25□□□□□ -2.05
RTT107YHR154W NFI1Q12216 726 aa2.25□□□□□ -2.05
RTT107YHR154W ZRT2Q12436 422 aa2.25□□□□□ -2.05
RTT107YHR154W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
RTT107YHR154W ARG3P05150 338 aa2.24□□□□□ -2.05
RTT107YHR154W SGF29P25554 259 aa2.24□□□□□ -2.05
RTT107YHR154W IFA38P38286 347 aa2.24□□□□□ -2.05
RTT107YHR154W TSL1P38427 1098 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W PUG1P40100 303 aa2.24□□□□□ -2.05
RTT107YHR154W YJL068CP40363 299 aa2.24□□□□□ -2.05
RTT107YHR154W SSU1P41930 458 aa2.24□□□□□ -2.05
RTT107YHR154W YGR045CP53229 120 aa2.24□□□□□ -2.05
RTT107YHR154W BSC5P53755 489 aa2.24□□□□□ -2.05
RTT107YHR154W ADA2Q02336 434 aa2.24□□□□□ -2.05
RTT107YHR154W CIA1Q05583 330 aa2.24□□□□□ -2.05
RTT107YHR154W UTP21Q06078 939 aaPredicted RBP2.24□□□□□ -2.05
RTT107YHR154W YOR059CQ08448 450 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W SOG2Q08817 791 aa2.24□□□□□ -2.05
RTT107YHR154W OSW2Q12202 724 aa2.24□□□□□ -2.05
RTT107YHR154W YLL054CQ12244 843 aa2.24□□□□□ -2.05
RTT107YHR154W NOT3P06102 836 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W RPC40P07703 335 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W CUP1-1P0CX80 61 aa2.24□□□□□ -2.05
RTT107YHR154W CUP1-2P0CX81 61 aa2.24□□□□□ -2.05
RTT107YHR154W CKA1P15790 372 aa2.24□□□□□ -2.05
RTT107YHR154W NCP1P16603 691 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W RIT1P23796 513 aa2.24□□□□□ -2.05
RTT107YHR154W RPC53P25441 422 aa2.24□□□□□ -2.05
RTT107YHR154W YCL049CP25577 312 aa2.24□□□□□ -2.05
RTT107YHR154W SWD1P39706 426 aa2.24□□□□□ -2.05
RTT107YHR154W TED1P40533 473 aa2.24□□□□□ -2.05
RTT107YHR154W AXL1P40851 1208 aa2.24□□□□□ -2.05
RTT107YHR154W YAP1802P53309 568 aa2.24□□□□□ -2.05
RTT107YHR154W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
RTT107YHR154W TPP1Q03796 238 aa2.24□□□□□ -2.05
RTT107YHR154W HEL2Q05580 639 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W SGO1Q08490 590 aa2.24□□□□□ -2.05
RTT107YHR154W HRK1Q08732 759 aaKnown RBP2.24□□□□□ -2.05
RTT107YHR154W SFI1Q12369 946 aa2.24□□□□□ -2.05
RTT107YHR154W YBR126W-AQ8TGU7 68 aa2.24□□□□□ -2.05
RTT107YHR154W GCN4P03069 281 aa2.23□□□□□ -2.05
RTT107YHR154W PMS1P14242 873 aa2.23□□□□□ -2.05
RTT107YHR154W PDX1P16451 410 aa2.23□□□□□ -2.05
RTT107YHR154W HOP1P20050 605 aa2.23□□□□□ -2.05
RTT107YHR154W BET2P20133 325 aa2.23□□□□□ -2.05
RTT107YHR154W KRE2P27809 442 aa2.23□□□□□ -2.05
RTT107YHR154W AFR1P33304 620 aa2.23□□□□□ -2.05
RTT107YHR154W SET3P36124 751 aa2.23□□□□□ -2.05
RTT107YHR154W UIP5P36137 443 aa2.23□□□□□ -2.05
RTT107YHR154W FLR1P38124 548 aa2.23□□□□□ -2.05
RTT107YHR154W YBL029WP38201 376 aa2.23□□□□□ -2.05
RTT107YHR154W FTH1P38310 465 aa2.23□□□□□ -2.05
RTT107YHR154W YER010CP40011 234 aa2.23□□□□□ -2.05
RTT107YHR154W TPA1P40032 644 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W YJL045WP47052 634 aa2.23□□□□□ -2.05
RTT107YHR154W UPF3P48412 387 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W RSA3Q05942 220 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W ACK1Q07622 623 aaPredicted RBP2.23□□□□□ -2.05
RTT107YHR154W GAS5Q08193 484 aa2.23□□□□□ -2.05
RTT107YHR154W TRM8Q12009 286 aa2.23□□□□□ -2.05
RTT107YHR154W HOS1Q12214 470 aa2.23□□□□□ -2.05
RTT107YHR154W MDM20Q12387 796 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W NUM1Q00402 2748 aa2.23□□□□□ -2.05
RTT107YHR154W FUM1P08417 488 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W UBC1P21734 215 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W MCM3P24279 971 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W GCD7P32502 381 aaPredicted RBP2.23□□□□□ -2.05
RTT107YHR154W LIP5P32875 414 aa2.23□□□□□ -2.05
RTT107YHR154W MAM1P40065 302 aa2.23□□□□□ -2.05
RTT107YHR154W RIC1P40395 1056 aa2.23□□□□□ -2.05
RTT107YHR154W PFK26P40433 827 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W YIL108WP40483 696 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W PRM2P40534 656 aa2.23□□□□□ -2.05
RTT107YHR154W GYP7P48365 746 aa2.23□□□□□ -2.05
RTT107YHR154W YML6P51998 286 aa2.23□□□□□ -2.05
RTT107YHR154W NCS2P53923 493 aaPredicted RBP2.23□□□□□ -2.05
RTT107YHR154W MTD1Q02046 320 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W PRP42Q03776 544 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W TAF11Q04226 346 aa2.23□□□□□ -2.05
RTT107YHR154W YIG1Q08956 461 aa2.23□□□□□ -2.05
RTT107YHR154W SGT2Q12118 346 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W UBR2Q07963 1872 aa2.23□□□□□ -2.05
RTT107YHR154W COQ4O13525 335 aa2.23□□□□□ -2.05
RTT107YHR154W RPS17AP02407 136 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W RPS17BP14127 136 aaKnown RBP2.23□□□□□ -2.05
RTT107YHR154W LRG1P35688 1017 aa2.23□□□□□ -2.05
RTT107YHR154W YBR225WP38321 900 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms