RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	RMP1	Q12530	201 aa		5.67	□□□□□ -1.5
VAM7	YGL212W	RPL40A	P0CH08	128 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	RPL40B	P0CH09	128 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	YPK2	P18961	677 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	MSB1	P21339	1137 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	MRPL8	P22353	238 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	RDS1	P25611	832 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	HEM12	P32347	362 aa	Predicted RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	CDC12	P32468	407 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	MKK2	P32491	506 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	RPT3	P33298	428 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	SLC1	P33333	303 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	YPT52	P36018	234 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	MCD4	P36051	919 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	MMS4	P38257	691 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	YBR238C	P38330	731 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	TCD1	P38756	429 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	RTC3	P38804	111 aa	Predicted RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	MNL1	P38888	796 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	DSS1	P39112	969 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	SLN1	P39928	1220 aa	Predicted RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	AIM9	P40053	627 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	YJR039W	P47107	1121 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	STR2	P47164	639 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	OGG1	P53397	376 aa	Predicted RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	CNM67	P53865	581 aa	Known RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	CEG1	Q01159	459 aa	Predicted RBP	5.66	□□□□□ -1.5
VAM7	YGL212W	ECM18	Q04623	453 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	SPC2	Q04969	178 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	BOP2	Q06150	570 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	VPS54	Q12071	889 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	GYP5	Q12344	894 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	TSC13	Q99190	310 aa		5.66	□□□□□ -1.5
VAM7	YGL212W	FUS3	P16892	353 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	PRP9	P19736	530 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	RPI1	P23250	407 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	CDC15	P27636	974 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	MSN4	P33749	630 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	YBR225W	P38321	900 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	YDR089W	P38966	869 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	LTP1	P40347	161 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	YJR061W	P40355	935 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	DPH1	P40487	425 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	GCV2	P49095	1034 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	HFM1	P51979	1187 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	RPT4	P53549	437 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	KTR6	P54070	446 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	OAZ1	Q02803	292 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	MUK1	Q02866	612 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	HOS3	Q02959	697 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	RTT103	Q05543	409 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	BDS1	Q08347	646 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	ABP140	Q08641	628 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	TMA46	Q12000	345 aa	Known RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	VIK1	Q12045	647 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	HER1	Q12276	1246 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	PSY3	Q12318	242 aa		5.65	□□□□□ -1.5
VAM7	YGL212W	PFK27	Q12471	397 aa	Predicted RBP	5.65	□□□□□ -1.5
VAM7	YGL212W	PRE8	P23639	250 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	CWH43	P25618	953 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SBA1	P28707	216 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	MSP1	P28737	362 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	BMH1	P29311	267 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	ISF1	P32488	338 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	PRP19	P32523	503 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	SMC1	P32908	1225 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	OCT1	P35999	772 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	APD1	P38281	316 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	BIT2	P38346	545 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	RFC3	P38629	340 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	ERC1	P38767	581 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SEC31	P38968	1273 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	OAF1	P39720	1047 aa	Predicted RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	JHD1	P40034	492 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	YTA12	P40341	825 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	MVP1	P40959	511 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	PHB1	P40961	287 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	IAH1	P41734	238 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	GZF3	P42944	551 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	SNZ3	P43545	298 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	YJR096W	P47137	282 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	HSH155	P49955	971 aa	Known RBP	5.64	□□□□□ -1.51
VAM7	YGL212W	TAF4	P50105	388 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	NUT1	P53114	1132 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SNZ2	P53824	298 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	RNT1	Q02555	471 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	EEB1	Q02891	456 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SPP1	Q03012	353 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SEG1	Q04279	960 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SEC10	Q06245	871 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	BCP1	Q06338	283 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	TRM8	Q12009	286 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	YOL114C	Q12322	202 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	RTN2	Q12443	393 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	SRN2	Q99176	213 aa		5.64	□□□□□ -1.51
VAM7	YGL212W	RPS9A	O13516	197 aa	Known RBP	5.63	□□□□□ -1.51
VAM7	YGL212W	CAR2	P07991	424 aa	Known RBP	5.63	□□□□□ -1.51
VAM7	YGL212W	SEC18	P18759	758 aa	Known RBP	5.63	□□□□□ -1.51
VAM7	YGL212W	PRP2	P20095	876 aa	Predicted RBP	5.63	□□□□□ -1.51
VAM7	YGL212W	OLE1	P21147	510 aa	Known RBP	5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms