RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W MGS1P40151 587 aa1.1□□□□□ -2.23
SCC2YDR180W PXA1P41909 870 aa1.1□□□□□ -2.23
SCC2YDR180W GCN20P43535 752 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W HST3P53687 447 aa1.1□□□□□ -2.23
SCC2YDR180W JJJ1P53863 590 aa1.1□□□□□ -2.23
SCC2YDR180W SQS1P53866 767 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W SFB2P53953 876 aa1.1□□□□□ -2.23
SCC2YDR180W FMN1Q03778 218 aa1.1□□□□□ -2.23
SCC2YDR180W LRS4Q04087 347 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W MLC2Q06580 163 aa1.1□□□□□ -2.23
SCC2YDR180W YPR196WQ06595 470 aa1.1□□□□□ -2.23
SCC2YDR180W OPY2Q06810 360 aa1.1□□□□□ -2.23
SCC2YDR180W ISA1Q07821 250 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W NOP12Q08208 459 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W SGO1Q08490 590 aa1.1□□□□□ -2.23
SCC2YDR180W SOG2Q08817 791 aa1.1□□□□□ -2.23
SCC2YDR180W NEW1Q08972 1196 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W YTM1Q12024 460 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W NUR1Q12066 484 aa1.1□□□□□ -2.23
SCC2YDR180W CSF1Q12150 2958 aa1.1□□□□□ -2.23
SCC2YDR180W PEP5P12868 1029 aa1.1□□□□□ -2.23
SCC2YDR180W STE12P13574 688 aa1.1□□□□□ -2.23
SCC2YDR180W RSR1P13856 272 aa1.1□□□□□ -2.23
SCC2YDR180W SAN1P22470 610 aa1.1□□□□□ -2.23
SCC2YDR180W GAR1P28007 205 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W ITR2P30606 609 aa1.1□□□□□ -2.23
SCC2YDR180W JNM1P36224 373 aa1.1□□□□□ -2.23
SCC2YDR180W YBR242WP38331 238 aa1.1□□□□□ -2.23
SCC2YDR180W REI1P38344 393 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W YBR285WP38354 144 aa1.1□□□□□ -2.23
SCC2YDR180W PCM1P38628 557 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W SHC1P39000 512 aa1.1□□□□□ -2.23
SCC2YDR180W ERV46P39727 415 aa1.1□□□□□ -2.23
SCC2YDR180W EAF5P39995 279 aa1.1□□□□□ -2.23
SCC2YDR180W ARB1P40024 610 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W CCT5P40413 562 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W MKT1P40850 830 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W QRI7P43122 407 aa1.1□□□□□ -2.23
SCC2YDR180W BNA2P47125 453 aa1.1□□□□□ -2.23
SCC2YDR180W NPY1P53164 384 aa1.1□□□□□ -2.23
SCC2YDR180W CAF120P53836 1060 aa1.1□□□□□ -2.23
SCC2YDR180W ECM9Q02202 377 aa1.1□□□□□ -2.23
SCC2YDR180W HED1Q03937 162 aa1.1□□□□□ -2.23
SCC2YDR180W YDR514CQ04408 483 aa1.1□□□□□ -2.23
SCC2YDR180W AVO1Q08236 1176 aa1.1□□□□□ -2.23
SCC2YDR180W DCS2Q12123 353 aa1.1□□□□□ -2.23
SCC2YDR180W YOL114CQ12322 202 aa1.1□□□□□ -2.23
SCC2YDR180W MDM20Q12387 796 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W SPO21Q12411 609 aa1.1□□□□□ -2.23
SCC2YDR180W TCB1Q12466 1186 aa1.1□□□□□ -2.23
SCC2YDR180W AI5_ALPHAQ9ZZX1 630 aa1.1□□□□□ -2.23
SCC2YDR180W IRA2P19158 3079 aa1.1□□□□□ -2.23
SCC2YDR180W CDC4P07834 779 aa1.1□□□□□ -2.23
SCC2YDR180W MER1P16523 270 aa1.1□□□□□ -2.23
SCC2YDR180W KGD2P19262 463 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W PRP6P19735 899 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W PEX1P24004 1043 aa1.1□□□□□ -2.23
SCC2YDR180W URA1P28272 314 aaPredicted RBP1.1□□□□□ -2.23
SCC2YDR180W TFC1P32367 649 aa1.1□□□□□ -2.23
SCC2YDR180W PGM1P33401 570 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W MFT1P33441 392 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W STO1P34160 861 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W MCD4P36051 919 aa1.1□□□□□ -2.23
SCC2YDR180W PPS1P38148 807 aa1.1□□□□□ -2.23
SCC2YDR180W BIT2P38346 545 aa1.1□□□□□ -2.23
SCC2YDR180W RRP4P38792 359 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W MEP1P40260 492 aa1.1□□□□□ -2.23
SCC2YDR180W IRC24P40580 263 aa1.1□□□□□ -2.23
SCC2YDR180W SAP185P40856 1058 aa1.1□□□□□ -2.23
SCC2YDR180W SHR5P41912 237 aa1.1□□□□□ -2.23
SCC2YDR180W PSA1P41940 361 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W YJL107CP42947 387 aa1.1□□□□□ -2.23
SCC2YDR180W EPL1P43572 832 aa1.1□□□□□ -2.23
SCC2YDR180W SAD1P43589 448 aa1.1□□□□□ -2.23
SCC2YDR180W GUS1P46655 708 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
SCC2YDR180W NIT2P47016 307 aa1.1□□□□□ -2.23
SCC2YDR180W BNA3P47039 444 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W YJR098CP47139 656 aa1.1□□□□□ -2.23
SCC2YDR180W FMP48P53233 369 aa1.1□□□□□ -2.23
SCC2YDR180W MEP3P53390 489 aa1.1□□□□□ -2.23
SCC2YDR180W ASI1P54074 624 aa1.1□□□□□ -2.23
SCC2YDR180W HAS1Q03532 505 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W COQ9Q05779 260 aa1.1□□□□□ -2.23
SCC2YDR180W COA4Q05809 96 aa1.1□□□□□ -2.23
SCC2YDR180W OMS1Q06668 471 aa1.1□□□□□ -2.23
SCC2YDR180W REH1Q06709 432 aa1.1□□□□□ -2.23
SCC2YDR180W ADY3Q07732 790 aa1.1□□□□□ -2.23
SCC2YDR180W PEX15Q08215 383 aa1.1□□□□□ -2.23
SCC2YDR180W SGT1Q08446 395 aa1.1□□□□□ -2.23
SCC2YDR180W SNX3Q08826 162 aaKnown RBP1.1□□□□□ -2.23
SCC2YDR180W BMT6Q12291 365 aa1.1□□□□□ -2.23
SCC2YDR180W RAS1P01119 309 aa1.09□□□□□ -2.23
SCC2YDR180W ARG4P04076 463 aaPredicted RBP1.09□□□□□ -2.23
SCC2YDR180W PDE2P06776 526 aa1.09□□□□□ -2.23
SCC2YDR180W RPB2P08518 1224 aaKnown RBP1.09□□□□□ -2.23
SCC2YDR180W RPL11AP0C0W9 174 aaKnown RBP1.09□□□□□ -2.23
SCC2YDR180W RPO26P20435 155 aa1.09□□□□□ -2.23
SCC2YDR180W ATP12P22135 325 aa1.09□□□□□ -2.23
SCC2YDR180W KIP1P28742 1111 aa1.09□□□□□ -2.23
SCC2YDR180W HEM12P32347 362 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 312.3 ms