RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W TGL2P54857 326 aa5.04□□□□□ -1.6
SHR3YDL212W PSF3Q12146 194 aa5.04□□□□□ -1.6
SHR3YDL212W HOS1Q12214 470 aa5.04□□□□□ -1.6
SHR3YDL212W BET2P20133 325 aa5.03□□□□□ -1.6
SHR3YDL212W PHO3P24031 467 aa5.03□□□□□ -1.6
SHR3YDL212W SCS2P40075 244 aaKnown RBP5.03□□□□□ -1.6
SHR3YDL212W GSM1P42950 618 aa5.03□□□□□ -1.6
SHR3YDL212W YJL043WP47053 257 aa5.03□□□□□ -1.6
SHR3YDL212W WAR1Q03631 944 aa5.03□□□□□ -1.6
SHR3YDL212W NUR1Q12066 484 aa5.03□□□□□ -1.6
SHR3YDL212W AAC1P04710 309 aa5.02□□□□□ -1.61
SHR3YDL212W SDH8P38345 138 aa5.02□□□□□ -1.61
SHR3YDL212W SSP120P39931 234 aaKnown RBP5.02□□□□□ -1.61
SHR3YDL212W IMA5P40884 581 aa5.02□□□□□ -1.61
SHR3YDL212W TDA10P42938 290 aa5.02□□□□□ -1.61
SHR3YDL212W PUS4P48567 403 aaKnown RBP5.02□□□□□ -1.61
SHR3YDL212W YJU2P28320 278 aaPredicted RBP5.01□□□□□ -1.61
SHR3YDL212W RPC34P32910 317 aa5.01□□□□□ -1.61
SHR3YDL212W TGL1P34163 548 aa5.01□□□□□ -1.61
SHR3YDL212W BST1P43571 1029 aa5.01□□□□□ -1.61
SHR3YDL212W BNA3P47039 444 aaKnown RBP5.01□□□□□ -1.61
SHR3YDL212W YML119WQ03208 357 aa5.01□□□□□ -1.61
SHR3YDL212W GFD1Q04839 188 aaKnown RBP5.01□□□□□ -1.61
SHR3YDL212W Q0010Q9ZZX9 128 aa5.01□□□□□ -1.61
SHR3YDL212W YMR084WA2P2R3 262 aa5□□□□□ -1.61
SHR3YDL212W ADH4P10127 382 aa5□□□□□ -1.61
SHR3YDL212W CBP3P21560 335 aa5□□□□□ -1.61
SHR3YDL212W PRP45P28004 379 aaPredicted RBP5□□□□□ -1.61
SHR3YDL212W MRPL9P31334 269 aa5□□□□□ -1.61
SHR3YDL212W GDA1P32621 518 aa5□□□□□ -1.61
SHR3YDL212W XBP1P40489 647 aa5□□□□□ -1.61
SHR3YDL212W CEG1Q01159 459 aaPredicted RBP5□□□□□ -1.61
SHR3YDL212W GSY2P27472 705 aa4.99□□□□□ -1.61
SHR3YDL212W PRE2P30656 287 aaKnown RBP4.99□□□□□ -1.61
SHR3YDL212W CNM67P53865 581 aaKnown RBP4.99□□□□□ -1.61
SHR3YDL212W ACS1Q01574 713 aa4.99□□□□□ -1.61
SHR3YDL212W AFT2Q08957 416 aa4.99□□□□□ -1.61
SHR3YDL212W VAS1P07806 1104 aaKnown RBP4.98□□□□□ -1.61
SHR3YDL212W AMD2P22580 549 aa4.98□□□□□ -1.61
SHR3YDL212W VPS8P39702 1274 aa4.98□□□□□ -1.61
SHR3YDL212W PEX8P53248 589 aa4.98□□□□□ -1.61
SHR3YDL212W ATP23P53722 227 aa4.98□□□□□ -1.61
SHR3YDL212W TRS31Q03337 283 aa4.98□□□□□ -1.61
SHR3YDL212W SND1Q04007 877 aa4.98□□□□□ -1.61
SHR3YDL212W RAD33Q04231 177 aa4.98□□□□□ -1.61
SHR3YDL212W TRI1Q05024 226 aa4.98□□□□□ -1.61
SHR3YDL212W ENT2Q05785 613 aa4.98□□□□□ -1.61
SHR3YDL212W AHA1Q12449 350 aaKnown RBP4.98□□□□□ -1.61
SHR3YDL212W YLR111WQ12528 110 aa4.98□□□□□ -1.61
SHR3YDL212W MPD2Q99316 277 aa4.98□□□□□ -1.61
SHR3YDL212W LTP1P40347 161 aa4.97□□□□□ -1.61
SHR3YDL212W SAE2P46946 345 aa4.97□□□□□ -1.61
SHR3YDL212W POL31P46957 487 aa4.97□□□□□ -1.61
SHR3YDL212W HRD3Q05787 833 aa4.97□□□□□ -1.61
SHR3YDL212W CRT10Q08226 957 aa4.97□□□□□ -1.61
SHR3YDL212W RPS7AP26786 190 aaKnown RBP4.96□□□□□ -1.62
SHR3YDL212W ARO9P38840 513 aaPredicted RBP4.96□□□□□ -1.62
SHR3YDL212W SWD1P39706 426 aa4.96□□□□□ -1.62
SHR3YDL212W BSP1Q06604 576 aa4.96□□□□□ -1.62
SHR3YDL212W CYK3Q07533 885 aa4.96□□□□□ -1.62
SHR3YDL212W RDL1Q12305 139 aaKnown RBP4.96□□□□□ -1.62
SHR3YDL212W RRP43P25359 394 aaPredicted RBP4.95□□□□□ -1.62
SHR3YDL212W BEM3P32873 1128 aa4.95□□□□□ -1.62
SHR3YDL212W SAW1P39735 261 aa4.95□□□□□ -1.62
SHR3YDL212W VFA1P40080 203 aa4.95□□□□□ -1.62
SHR3YDL212W OPT1P40897 799 aa4.95□□□□□ -1.62
SHR3YDL212W IDS2P46958 469 aa4.95□□□□□ -1.62
SHR3YDL212W ASK10P48361 1146 aa4.95□□□□□ -1.62
SHR3YDL212W SPN1Q06505 410 aaPredicted RBP4.95□□□□□ -1.62
SHR3YDL212W PRS5Q12265 496 aaKnown RBP4.95□□□□□ -1.62
SHR3YDL212W YCR061WP25639 631 aa4.94□□□□□ -1.62
SHR3YDL212W ARB1P40024 610 aaKnown RBP4.94□□□□□ -1.62
SHR3YDL212W ULP2P40537 1034 aaPredicted RBP4.94□□□□□ -1.62
SHR3YDL212W NET1P47035 1189 aa4.94□□□□□ -1.62
SHR3YDL212W BPL1P48445 690 aaPredicted RBP4.94□□□□□ -1.62
SHR3YDL212W UBP16Q02863 499 aa4.94□□□□□ -1.62
SHR3YDL212W LCB4Q12246 624 aa4.94□□□□□ -1.62
SHR3YDL212W CHO2P05374 869 aaKnown RBP4.93□□□□□ -1.62
SHR3YDL212W PTP1P25044 335 aa4.93□□□□□ -1.62
SHR3YDL212W SDS22P36047 338 aa4.93□□□□□ -1.62
SHR3YDL212W APD1P38281 316 aa4.93□□□□□ -1.62
SHR3YDL212W YLF2P38746 405 aa4.93□□□□□ -1.62
SHR3YDL212W NMD5P46970 1048 aa4.93□□□□□ -1.62
SHR3YDL212W ATG36P46983 293 aa4.93□□□□□ -1.62
SHR3YDL212W RSC9Q03124 581 aa4.93□□□□□ -1.62
SHR3YDL212W ORM2Q06144 216 aa4.93□□□□□ -1.62
SHR3YDL212W NIC96P34077 839 aa4.92□□□□□ -1.62
SHR3YDL212W MTG2P38860 518 aa4.92□□□□□ -1.62
SHR3YDL212W MAD3P47074 515 aa4.92□□□□□ -1.62
SHR3YDL212W ARP7Q12406 477 aa4.92□□□□□ -1.62
SHR3YDL212W ECM32P32644 1121 aaKnown RBP4.91□□□□□ -1.62
SHR3YDL212W SAP1P39955 897 aaKnown RBP4.91□□□□□ -1.62
SHR3YDL212W SNM1P40993 198 aa4.91□□□□□ -1.62
SHR3YDL212W COG2P53271 262 aa4.91□□□□□ -1.62
SHR3YDL212W CRF1Q04930 467 aa4.91□□□□□ -1.62
SHR3YDL212W YML053CQ04978 212 aa4.91□□□□□ -1.62
SHR3YDL212W IRC3Q06683 689 aa4.91□□□□□ -1.62
SHR3YDL212W YDL242WQ07746 117 aa4.91□□□□□ -1.62
SHR3YDL212W AAD4Q07747 329 aa4.91□□□□□ -1.62
SHR3YDL212W ICT1Q12385 394 aa4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms