RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	ADE6	P38972	1358 aa	Known RBP	5.33	□□□□□ -1.56
SLX1	YBR228W	SEC65	P29478	273 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	CCT5	P40413	562 aa	Known RBP	5.33	□□□□□ -1.56
SLX1	YBR228W	TAF4	P50105	388 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	FDC1	Q03034	503 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	PDS5	Q04264	1277 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	ORM2	Q06144	216 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	RGT2	Q12300	763 aa		5.33	□□□□□ -1.56
SLX1	YBR228W	GLN4	P13188	809 aa	Known RBP	5.32	□□□□□ -1.56
SLX1	YBR228W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.32	□□□□□ -1.56	not detected
SLX1	YBR228W	CRG1	P38892	291 aa	RIP-Chip data	5.32	□□□□□ -1.56	RIP-Chip
SLX1	YBR228W	PIP2	P52960	996 aa		5.32	□□□□□ -1.56
SLX1	YBR228W	YPL216W	Q08964	1102 aa		5.32	□□□□□ -1.56
SLX1	YBR228W	ZPS1	Q12512	249 aa		5.32	□□□□□ -1.56
SLX1	YBR228W	URB1	P34241	1764 aa	Known RBP	5.32	□□□□□ -1.56
SLX1	YBR228W	FKS3	Q04952	1785 aa		5.32	□□□□□ -1.56
SLX1	YBR228W	LEU2	P04173	364 aa	Predicted RBP	5.31	□□□□□ -1.56
SLX1	YBR228W	MBR1	P23493	339 aa		5.31	□□□□□ -1.56
SLX1	YBR228W	PRE4	P30657	266 aa		5.31	□□□□□ -1.56
SLX1	YBR228W	FTR1	P40088	404 aa		5.31	□□□□□ -1.56
SLX1	YBR228W	YGR054W	P53235	642 aa	Known RBP	5.31	□□□□□ -1.56
SLX1	YBR228W	YHM2	Q04013	314 aa		5.31	□□□□□ -1.56
SLX1	YBR228W	MRPL7	P36519	292 aa		5.3	□□□□□ -1.56
SLX1	YBR228W	DNM1	P54861	757 aa		5.3	□□□□□ -1.56
SLX1	YBR228W	EFR3	Q03653	782 aa	Known RBP	5.3	□□□□□ -1.56
SLX1	YBR228W	CEF1	Q03654	590 aa	Predicted RBP	5.3	□□□□□ -1.56
SLX1	YBR228W	THI73	Q07904	523 aa		5.3	□□□□□ -1.56
SLX1	YBR228W	SEC3	P33332	1336 aa	Known RBP	5.29	□□□□□ -1.56
SLX1	YBR228W	HEM1	P09950	548 aa	Predicted RBP	5.29	□□□□□ -1.56
SLX1	YBR228W	YHR033W	P38690	423 aa		5.29	□□□□□ -1.56
SLX1	YBR228W	ATP23	P53722	227 aa		5.29	□□□□□ -1.56
SLX1	YBR228W	STP1	Q00947	519 aa		5.29	□□□□□ -1.56
SLX1	YBR228W	YDL073W	Q07454	984 aa		5.29	□□□□□ -1.56
SLX1	YBR228W	YRF1-3	P0CX14	1859 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	YRF1-7	P0CX15	1859 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	YRF1-6	P53819	1859 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	SPT7	P35177	1332 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	CPA2	P03965	1118 aa	Known RBP	5.28	□□□□□ -1.56
SLX1	YBR228W	MRPL9	P31334	269 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	YEL025C	P39991	1188 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	ULP2	P40537	1034 aa	Predicted RBP	5.28	□□□□□ -1.56
SLX1	YBR228W	IES1	P43579	692 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	BUD17	P53727	317 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	ECM9	Q02202	377 aa		5.28	□□□□□ -1.56
SLX1	YBR228W	RPL7A	P05737	244 aa	Known RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	RPS24A	P0CX31	135 aa	Known RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	RPS24B	P0CX32	135 aa	Known RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	PMA2	P19657	947 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	DHR2	P36009	735 aa	Predicted RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	PRM2	P40534	656 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	YJL043W	P47053	257 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	APC1	P53886	1748 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	NSE5	Q03718	556 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	MTQ2	Q03920	221 aa	Predicted RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	IRC3	Q06683	689 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	AIM41	Q12032	185 aa		5.27	□□□□□ -1.57
SLX1	YBR228W	RPL7B	Q12213	244 aa	Known RBP	5.27	□□□□□ -1.57
SLX1	YBR228W	PRP45	P28004	379 aa	Predicted RBP	5.26	□□□□□ -1.57
SLX1	YBR228W	OAF3	P36023	863 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	EHT1	P38295	451 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	HXT6	P39003	570 aa	Known RBP	5.26	□□□□□ -1.57
SLX1	YBR228W	HXT7	P39004	570 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	VID28	P40547	921 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	PSA1	P41940	361 aa	Known RBP	5.26	□□□□□ -1.57
SLX1	YBR228W	COQ6	P53318	479 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	MPS1	P54199	764 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	PTA1	Q01329	785 aa	Predicted RBP	5.26	□□□□□ -1.57
SLX1	YBR228W	HLR1	Q04429	423 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	AUS1	Q08409	1394 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	SNF2	P22082	1703 aa		5.26	□□□□□ -1.57
SLX1	YBR228W	NUP145	P49687	1317 aa		5.25	□□□□□ -1.57
SLX1	YBR228W	YEF3	P16521	1044 aa	Known RBP	5.25	□□□□□ -1.57
SLX1	YBR228W	CNE1	P27825	502 aa		5.25	□□□□□ -1.57
SLX1	YBR228W	CDS1	P38221	457 aa		5.25	□□□□□ -1.57
SLX1	YBR228W	GZF3	P42944	551 aa	Known RBP	5.25	□□□□□ -1.57
SLX1	YBR228W	UTP14	Q04500	899 aa	Known RBP	5.25	□□□□□ -1.57
SLX1	YBR228W	FAT1	P38225	669 aa		5.24	□□□□□ -1.57
SLX1	YBR228W	SCS3	P53012	380 aa		5.24	□□□□□ -1.57
SLX1	YBR228W	TAP42	Q04372	366 aa		5.24	□□□□□ -1.57
SLX1	YBR228W	YCG1	Q06680	1035 aa		5.24	□□□□□ -1.57
SLX1	YBR228W	ENT1	Q12518	454 aa		5.24	□□□□□ -1.57
SLX1	YBR228W	BEM3	P32873	1128 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	RPC34	P32910	317 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	LOT5	P34234	306 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	YNL018C	P53976	612 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	UME1	Q03010	460 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	YTM1	Q12024	460 aa	Predicted RBP	5.23	□□□□□ -1.57
SLX1	YBR228W	FRE7	Q12333	620 aa		5.23	□□□□□ -1.57
SLX1	YBR228W	RPS21A	P0C0V8	87 aa	Known RBP	5.22	□□□□□ -1.57
SLX1	YBR228W	AQY1	P0CD91	305 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	WHI2	P12611	486 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	GRX4	P32642	244 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	OAF1	P39720	1047 aa	Predicted RBP	5.22	□□□□□ -1.57
SLX1	YBR228W	GFD1	Q04839	188 aa	Known RBP	5.22	□□□□□ -1.57
SLX1	YBR228W	HIM1	Q06674	414 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	TGS1	Q12052	315 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	HFI1	Q12060	488 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	SLM3	Q12093	417 aa		5.22	□□□□□ -1.57
SLX1	YBR228W	HOP1	P20050	605 aa		5.21	□□□□□ -1.58
SLX1	YBR228W	RNR3	P21672	869 aa	Known RBP	5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 182.2 ms