RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 ARH1P48360 493 aa3.42□□□□□ -1.86
snR47snR47 STS1P38637 319 aa3.4□□□□□ -1.87
snR47snR47 GYP5Q12344 894 aa3.4□□□□□ -1.87
snR47snR47 YFR006WP43590 535 aa3.39□□□□□ -1.87
snR47snR47 DCW1P36091 449 aa3.37□□□□□ -1.87
snR47snR47 PML39Q03760 334 aa3.37□□□□□ -1.87
snR47snR47 SPT23P35210 1082 aa3.36□□□□□ -1.87
snR47snR47 YAH1Q12184 172 aaKnown RBP3.36□□□□□ -1.87
snR47snR47 YLR271WQ06152 274 aa3.35□□□□□ -1.87
snR47snR47 TRK1P12685 1235 aa3.34□□□□□ -1.87
snR47snR47 RAS1P01119 309 aa3.33□□□□□ -1.88
snR47snR47 YML082WQ04533 649 aaKnown RBP3.33□□□□□ -1.88
snR47snR47 BFR2Q06631 534 aaKnown RBP3.32□□□□□ -1.88
snR47snR47 RTG3P38165 486 aa3.31□□□□□ -1.88
snR47snR47 BNI4P53858 892 aa3.31□□□□□ -1.88
snR47snR47 HAP5Q02516 242 aa3.27□□□□□ -1.89
snR47snR47 MID1P41821 548 aa3.26□□□□□ -1.89
snR47snR47 AMS1P22855 1083 aa3.24□□□□□ -1.89
snR47snR47 PTC2P39966 464 aaKnown RBP3.24□□□□□ -1.89
snR47snR47 NST1P53935 1240 aa3.24□□□□□ -1.89
snR47snR47 PEX29Q03370 554 aa3.21□□□□□ -1.9
snR47snR47 GRE2Q12068 342 aaKnown RBP3.21□□□□□ -1.9
snR47snR47 RCR1P38212 213 aa3.18□□□□□ -1.9
snR47snR47 YPR015CQ12531 247 aa3.17□□□□□ -1.9
snR47snR47 AI4P03878 556 aa3.16□□□□□ -1.9
snR47snR47 SDH2P21801 266 aa3.16□□□□□ -1.9
snR47snR47 GUT1P32190 709 aa3.16□□□□□ -1.9
snR47snR47 CST9Q06032 482 aa3.16□□□□□ -1.9
snR47snR47 MPC54Q08550 464 aa3.16□□□□□ -1.9
snR47snR47 MPH3P0CE00 602 aa3.15□□□□□ -1.91
snR47snR47 GAR1P28007 205 aaKnown RBP3.14□□□□□ -1.91
snR47snR47 BRE2P43132 505 aa3.14□□□□□ -1.91
snR47snR47 RAM1P22007 431 aa3.13□□□□□ -1.91
snR47snR47 SOL3P38858 249 aa3.13□□□□□ -1.91
snR47snR47 ILV3P39522 585 aaKnown RBP3.13□□□□□ -1.91
snR47snR47 GBP2P25555 427 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
snR47snR47 ATH1P48016 1211 aa3.12□□□□□ -1.91
snR47snR47 NMA111P53920 997 aa3.12□□□□□ -1.91
snR47snR47 GCR2Q01722 534 aa3.1□□□□□ -1.91
snR47snR47 SAS4Q04003 481 aa3.1□□□□□ -1.91
snR47snR47 ARP8Q12386 881 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
snR47snR47 MGA2P40578 1113 aa3.09□□□□□ -1.91
snR47snR47 GYP1Q08484 637 aa3.09□□□□□ -1.91
snR47snR47 YEL077CQ3E7X8 1277 aa3.09□□□□□ -1.91
snR47snR47 PTC3P34221 468 aaKnown RBP3.08□□□□□ -1.92
snR47snR47 MTC5Q03897 1148 aa3.08□□□□□ -1.92
snR47snR47 DPL1Q05567 589 aa3.06□□□□□ -1.92
snR47snR47 MET22P32179 357 aa3.05□□□□□ -1.92
snR47snR47 EDS1P38073 919 aa3.05□□□□□ -1.92
snR47snR47 SSP1P38871 571 aa3.04□□□□□ -1.92
snR47snR47 ENV9Q08651 330 aa3.04□□□□□ -1.92
snR47snR47 SLI15P38283 698 aa3.02□□□□□ -1.93
snR47snR47 AIR1P40507 360 aaKnown RBP3.02□□□□□ -1.93
snR47snR47 YDL176WQ12027 708 aa3.02□□□□□ -1.93
snR47snR47 ISU2Q12056 156 aa3.02□□□□□ -1.93
snR47snR47 MRF1P30775 413 aaPredicted RBP3.01□□□□□ -1.93
snR47snR47 MIF2P35201 549 aa3.01□□□□□ -1.93
snR47snR47 YGR273CP53329 174 aa2.99□□□□□ -1.93
snR47snR47 MAK11P20484 414 aaKnown RBP2.98□□□□□ -1.93
snR47snR47 CLA4P48562 842 aa2.97□□□□□ -1.93
snR47snR47 YDR444WQ04093 687 aa2.97□□□□□ -1.93
snR47snR47 CDC4P07834 779 aa2.96□□□□□ -1.94
snR47snR47 PDR1P12383 1068 aa2.95□□□□□ -1.94
snR47snR47 CST6P40535 587 aa2.94□□□□□ -1.94
snR47snR47 LCB5Q06147 687 aaKnown RBP2.94□□□□□ -1.94
snR47snR47 ERG12P07277 443 aa2.92□□□□□ -1.94
snR47snR47 COQ8P27697 501 aa2.92□□□□□ -1.94
snR47snR47 LAM6Q08001 693 aa2.92□□□□□ -1.94
snR47snR47 BUD20Q08004 166 aaPredicted RBP2.91□□□□□ -1.94
snR47snR47 PRT1P06103 763 aaKnown RBP2.9□□□□□ -1.95
snR47snR47 CDC73Q06697 393 aa2.9□□□□□ -1.95
snR47snR47 NOP53Q12080 455 aaKnown RBP2.9□□□□□ -1.95
snR47snR47 RAM2P29703 316 aa2.88□□□□□ -1.95
snR47snR47 KEX1P09620 729 aa2.85□□□□□ -1.95
snR47snR47 TRK2P28584 889 aa2.85□□□□□ -1.95
snR47snR47 HED1Q03937 162 aa2.85□□□□□ -1.95
snR47snR47 RRD1P40454 393 aaKnown RBP2.84□□□□□ -1.95
snR47snR47 ACO2P39533 789 aa2.83□□□□□ -1.96
snR47snR47 STR2P47164 639 aa2.83□□□□□ -1.96
snR47snR47 AFT1P22149 690 aa2.81□□□□□ -1.96
snR47snR47 TFA1P36100 482 aa2.81□□□□□ -1.96
snR47snR47 ISM1P48526 1002 aa2.81□□□□□ -1.96
snR47snR47 NRD1P53617 575 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
snR47snR47 FRK1Q03002 865 aaPredicted RBP2.81□□□□□ -1.96
snR47snR47 LSB3P43603 459 aaKnown RBP2.8□□□□□ -1.96
snR47snR47 BDP1P46678 594 aa2.8□□□□□ -1.96
snR47snR47 ASH1P34233 588 aa2.79□□□□□ -1.96
snR47snR47 ICP55P40051 511 aa2.79□□□□□ -1.96
snR47snR47 CAF120P53836 1060 aa2.79□□□□□ -1.96
snR47snR47 MET32Q12041 191 aa2.79□□□□□ -1.96
snR47snR47 YGR035CP53222 116 aa2.78□□□□□ -1.96
snR47snR47 TY1A-DR4O74302 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-HP0C2I4 478 aaKnown RBP2.77□□□□□ -1.97
snR47snR47 TY1A-AP0CX57 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-PR1P0CX58 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-ORP0CX59 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-PR2P0CX60 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-DR5P0CX65 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-ER2P0CX66 440 aa2.77□□□□□ -1.97
snR47snR47 TY1A-GR3P0CX67 440 aa2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms