RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B STS1P38637 319 aa3.76□□□□□ -1.81
snR39BsnR39B YEL023CP39992 682 aa3.76□□□□□ -1.81
snR39BsnR39B SSP1P38871 571 aa3.74□□□□□ -1.81
snR39BsnR39B DPS1P04802 557 aaKnown RBP3.73□□□□□ -1.81
snR39BsnR39B DCW1P36091 449 aa3.73□□□□□ -1.81
snR39BsnR39B MGA2P40578 1113 aa3.73□□□□□ -1.81
snR39BsnR39B ELP4Q02884 456 aaKnown RBP3.73□□□□□ -1.81
snR39BsnR39B RGA2Q06407 1009 aa3.7□□□□□ -1.82
snR39BsnR39B PML39Q03760 334 aa3.68□□□□□ -1.82
snR39BsnR39B ARH1P48360 493 aa3.67□□□□□ -1.82
snR39BsnR39B CST9Q06032 482 aa3.67□□□□□ -1.82
snR39BsnR39B GRE2Q12068 342 aaKnown RBP3.67□□□□□ -1.82
snR39BsnR39B SPT23P35210 1082 aa3.66□□□□□ -1.82
snR39BsnR39B RGA1P39083 1007 aa3.64□□□□□ -1.83
snR39BsnR39B PEX29Q03370 554 aa3.63□□□□□ -1.83
snR39BsnR39B GUT1P32190 709 aa3.62□□□□□ -1.83
snR39BsnR39B RCR1P38212 213 aa3.62□□□□□ -1.83
snR39BsnR39B ATH1P48016 1211 aa3.62□□□□□ -1.83
snR39BsnR39B HAP5Q02516 242 aa3.6□□□□□ -1.83
snR39BsnR39B BNI4P53858 892 aa3.59□□□□□ -1.83
snR39BsnR39B YML082WQ04533 649 aaKnown RBP3.59□□□□□ -1.83
snR39BsnR39B PTC2P39966 464 aaKnown RBP3.58□□□□□ -1.84
snR39BsnR39B YDR344CQ05510 147 aa3.58□□□□□ -1.84
snR39BsnR39B MIF2P35201 549 aa3.57□□□□□ -1.84
snR39BsnR39B SRC1Q03707 834 aa3.57□□□□□ -1.84
snR39BsnR39B AI4P03878 556 aa3.56□□□□□ -1.84
snR39BsnR39B MID1P41821 548 aa3.56□□□□□ -1.84
snR39BsnR39B MPH3P0CE00 602 aa3.55□□□□□ -1.84
snR39BsnR39B MAK11P20484 414 aaKnown RBP3.55□□□□□ -1.84
snR39BsnR39B PTC3P34221 468 aaKnown RBP3.55□□□□□ -1.84
snR39BsnR39B NST1P53935 1240 aa3.52□□□□□ -1.85
snR39BsnR39B TRK1P12685 1235 aa3.5□□□□□ -1.85
snR39BsnR39B MPC54Q08550 464 aa3.5□□□□□ -1.85
snR39BsnR39B NOP53Q12080 455 aaKnown RBP3.5□□□□□ -1.85
snR39BsnR39B EDS1P38073 919 aa3.48□□□□□ -1.85
snR39BsnR39B NMA111P53920 997 aa3.48□□□□□ -1.85
snR39BsnR39B AMS1P22855 1083 aa3.47□□□□□ -1.85
snR39BsnR39B COQ8P27697 501 aa3.47□□□□□ -1.85
snR39BsnR39B SOL3P38858 249 aa3.47□□□□□ -1.85
snR39BsnR39B SAS4Q04003 481 aa3.47□□□□□ -1.85
snR39BsnR39B DPL1Q05567 589 aa3.47□□□□□ -1.85
snR39BsnR39B RAS1P01119 309 aa3.46□□□□□ -1.86
snR39BsnR39B GYP1Q08484 637 aa3.46□□□□□ -1.86
snR39BsnR39B YGR273CP53329 174 aa3.45□□□□□ -1.86
snR39BsnR39B RAM2P29703 316 aa3.44□□□□□ -1.86
snR39BsnR39B YPL062WQ02781 134 aa3.44□□□□□ -1.86
snR39BsnR39B ISU2Q12056 156 aa3.44□□□□□ -1.86
snR39BsnR39B ILV3P39522 585 aaKnown RBP3.43□□□□□ -1.86
snR39BsnR39B YEL077CQ3E7X8 1277 aa3.43□□□□□ -1.86
snR39BsnR39B MRF1P30775 413 aaPredicted RBP3.42□□□□□ -1.86
snR39BsnR39B SLI15P38283 698 aa3.42□□□□□ -1.86
snR39BsnR39B RPP1BP10622 106 aaKnown RBP3.4□□□□□ -1.87
snR39BsnR39B GBP2P25555 427 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
snR39BsnR39B GCR2Q01722 534 aa3.4□□□□□ -1.87
snR39BsnR39B YPR015CQ12531 247 aa3.39□□□□□ -1.87
snR39BsnR39B RAM1P22007 431 aa3.38□□□□□ -1.87
snR39BsnR39B BRE2P43132 505 aa3.36□□□□□ -1.87
snR39BsnR39B KEX1P09620 729 aa3.34□□□□□ -1.87
snR39BsnR39B ERG12P07277 443 aa3.33□□□□□ -1.88
snR39BsnR39B GAR1P28007 205 aaKnown RBP3.33□□□□□ -1.88
snR39BsnR39B CDC73Q06697 393 aa3.32□□□□□ -1.88
snR39BsnR39B PRT1P06103 763 aaKnown RBP3.31□□□□□ -1.88
snR39BsnR39B SDH2P21801 266 aa3.31□□□□□ -1.88
snR39BsnR39B PDR1P12383 1068 aa3.3□□□□□ -1.88
snR39BsnR39B PEX21P50091 288 aa3.29□□□□□ -1.88
snR39BsnR39B RAD54P32863 898 aa3.27□□□□□ -1.89
snR39BsnR39B NPL4P33755 580 aa3.27□□□□□ -1.89
snR39BsnR39B IFH1P39520 1085 aa3.27□□□□□ -1.89
snR39BsnR39B CDC4P07834 779 aa3.26□□□□□ -1.89
snR39BsnR39B BUD20Q08004 166 aaPredicted RBP3.26□□□□□ -1.89
snR39BsnR39B ENV9Q08651 330 aa3.26□□□□□ -1.89
snR39BsnR39B SPT16P32558 1035 aaKnown RBP3.25□□□□□ -1.89
snR39BsnR39B UBP14P38237 781 aaKnown RBP3.25□□□□□ -1.89
snR39BsnR39B YLR326WQ06170 240 aaKnown RBP3.25□□□□□ -1.89
snR39BsnR39B TFB4Q12004 338 aa3.25□□□□□ -1.89
snR39BsnR39B PAT1P25644 796 aaKnown RBP3.24□□□□□ -1.89
snR39BsnR39B PCS60P38137 543 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
snR39BsnR39B KIC1P38692 1080 aa3.24□□□□□ -1.89
snR39BsnR39B CSC1Q06538 782 aa3.24□□□□□ -1.89
snR39BsnR39B MET22P32179 357 aa3.23□□□□□ -1.89
snR39BsnR39B VHR2P40041 505 aa3.23□□□□□ -1.89
snR39BsnR39B AIR1P40507 360 aaKnown RBP3.23□□□□□ -1.89
snR39BsnR39B YRR1Q12172 810 aa3.23□□□□□ -1.89
snR39BsnR39B CST6P40535 587 aa3.22□□□□□ -1.89
snR39BsnR39B YDR444WQ04093 687 aa3.22□□□□□ -1.89
snR39BsnR39B LAM6Q08001 693 aa3.22□□□□□ -1.89
snR39BsnR39B NUD1P32336 851 aa3.21□□□□□ -1.9
snR39BsnR39B STR2P47164 639 aa3.21□□□□□ -1.9
snR39BsnR39B HED1Q03937 162 aa3.21□□□□□ -1.9
snR39BsnR39B ISM1P48526 1002 aa3.2□□□□□ -1.9
snR39BsnR39B GCD11P32481 527 aaKnown RBP3.19□□□□□ -1.9
snR39BsnR39B SET1P38827 1080 aaKnown RBP3.19□□□□□ -1.9
snR39BsnR39B FRK1Q03002 865 aaPredicted RBP3.19□□□□□ -1.9
snR39BsnR39B TUM1Q08686 304 aaKnown RBP3.19□□□□□ -1.9
snR39BsnR39B GAP1P19145 602 aaPredicted RBP3.18□□□□□ -1.9
snR39BsnR39B CLA4P48562 842 aa3.18□□□□□ -1.9
snR39BsnR39B MTC5Q03897 1148 aa3.18□□□□□ -1.9
snR39BsnR39B LCB5Q06147 687 aaKnown RBP3.18□□□□□ -1.9
snR39BsnR39B BDP1P46678 594 aa3.17□□□□□ -1.9
snR39BsnR39B HST3P53687 447 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms