RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C DNF1P32660 1571 aa7.76□□□□□ -1.17
SPN1YPR133C MET5P47169 1442 aa7.76□□□□□ -1.17
SPN1YPR133C BNI1P41832 1953 aa7.75□□□□□ -1.17
SPN1YPR133C YPK9Q12697 1472 aa7.75□□□□□ -1.17
SPN1YPR133C RPA190P10964 1664 aaKnown RBP7.73□□□□□ -1.17
SPN1YPR133C CHD1P32657 1468 aa7.72□□□□□ -1.17
SPN1YPR133C RKR1Q04781 1562 aa7.71□□□□□ -1.17
SPN1YPR133C SSP1P38871 571 aa7.71□□□□□ -1.18
SPN1YPR133C LTE1P07866 1435 aa7.7□□□□□ -1.18
SPN1YPR133C RPO31P04051 1460 aa7.7□□□□□ -1.18
SPN1YPR133C SPP1Q03012 353 aa7.7□□□□□ -1.18
SPN1YPR133C TY1B-HO13535 1793 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-DR5P0C2I2 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-DR6P0C2I3 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-LR2P0C2I5 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-LR3P0C2I6 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY1B-PR1P0C2I9 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY1B-PR2P0C2J0 1756 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-PR3P0C2J1 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY1B-JR1P47098 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-ML2Q03434 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY1B-ER1Q03612 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-ML1Q04711 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY1B-GR2Q12269 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-OLQ12273 1755 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-PLQ12414 1755 aaKnown RBP7.69□□□□□ -1.18
SPN1YPR133C TY2B-BQ12491 1770 aa7.69□□□□□ -1.18
SPN1YPR133C YLR271WQ06152 274 aa7.69□□□□□ -1.18
SPN1YPR133C TY1B-DR3Q99231 1755 aa7.66□□□□□ -1.18
SPN1YPR133C WSC3Q12215 556 aa7.65□□□□□ -1.18
SPN1YPR133C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.65□□□□□ -1.18not detected
SPN1YPR133C PAN1P32521 1480 aa7.64□□□□□ -1.19
SPN1YPR133C GTT3P39996 337 aa7.63□□□□□ -1.19
SPN1YPR133C TIF11P38912 153 aaKnown RBP7.61□□□□□ -1.19
SPN1YPR133C AIR2Q12476 344 aaKnown RBP7.61□□□□□ -1.19
SPN1YPR133C YJL171CP46992 396 aa7.6□□□□□ -1.19
SPN1YPR133C YRF1-1P0CX20 1796 aa7.6□□□□□ -1.19
SPN1YPR133C YRF1-5P0CX21 1796 aa7.6□□□□□ -1.19
SPN1YPR133C YRF1-8P0CX22 1796 aa7.6□□□□□ -1.19
SPN1YPR133C GEA2P39993 1459 aaKnown RBP7.6□□□□□ -1.19
SPN1YPR133C FKH1P40466 484 aa7.59□□□□□ -1.19
SPN1YPR133C RQC2Q12532 1038 aaKnown RBP7.57□□□□□ -1.2
SPN1YPR133C PSD2P53037 1138 aaKnown RBP7.56□□□□□ -1.2
SPN1YPR133C IRC20Q06554 1556 aa7.55□□□□□ -1.2
SPN1YPR133C ITT1Q04638 464 aa7.55□□□□□ -1.2
SPN1YPR133C TOP2P06786 1428 aaKnown RBP7.54□□□□□ -1.2
SPN1YPR133C TY1B-JR2P47100 1755 aaKnown RBP7.53□□□□□ -1.2
SPN1YPR133C TY1B-ER2Q03619 1755 aa7.53□□□□□ -1.2
SPN1YPR133C TY1B-MR1Q04214 1755 aa7.53□□□□□ -1.2
SPN1YPR133C TY1B-MR2Q04670 1755 aaKnown RBP7.53□□□□□ -1.2
SPN1YPR133C TY1B-LR1Q12088 1755 aaKnown RBP7.53□□□□□ -1.2
SPN1YPR133C TY1B-NL1Q12112 1755 aa7.53□□□□□ -1.2
SPN1YPR133C TY1B-GR1Q12141 1755 aa7.53□□□□□ -1.2
SPN1YPR133C TY1B-BLQ12490 1755 aa7.53□□□□□ -1.2
SPN1YPR133C YFR006WP43590 535 aa7.52□□□□□ -1.21
SPN1YPR133C MMS22Q06164 1454 aa7.51□□□□□ -1.21
SPN1YPR133C NTE1Q04958 1679 aa7.51□□□□□ -1.21
SPN1YPR133C ABP1P15891 592 aaKnown RBP7.5□□□□□ -1.21
SPN1YPR133C MMS1Q06211 1407 aa7.5□□□□□ -1.21
SPN1YPR133C MGA2P40578 1113 aa7.49□□□□□ -1.21
SPN1YPR133C LDB19Q12502 818 aa7.49□□□□□ -1.21
SPN1YPR133C TRM732Q03496 1420 aa7.49□□□□□ -1.21
SPN1YPR133C ULI1P43604 169 aa7.48□□□□□ -1.21
SPN1YPR133C MRM1P25270 412 aa7.47□□□□□ -1.21
SPN1YPR133C MSB4Q12317 492 aa7.47□□□□□ -1.21
SPN1YPR133C PIB1Q06651 286 aa7.46□□□□□ -1.22
SPN1YPR133C IOC2Q12072 812 aa7.46□□□□□ -1.22
SPN1YPR133C RPO21P04050 1733 aaKnown RBP7.46□□□□□ -1.22
SPN1YPR133C DNF2Q12675 1612 aa7.45□□□□□ -1.22
SPN1YPR133C VPS15P22219 1454 aa7.45□□□□□ -1.22
SPN1YPR133C NUP159P40477 1460 aa7.45□□□□□ -1.22
SPN1YPR133C BMT6Q12291 365 aa7.44□□□□□ -1.22
SPN1YPR133C DRS2P39524 1355 aa7.44□□□□□ -1.22
SPN1YPR133C EAP1P36041 632 aaKnown RBP7.43□□□□□ -1.22
SPN1YPR133C CST9Q06032 482 aa7.43□□□□□ -1.22
SPN1YPR133C POL1P13382 1468 aa7.41□□□□□ -1.22
SPN1YPR133C SPP41P38904 1435 aa7.39□□□□□ -1.23
SPN1YPR133C SMC4Q12267 1418 aa7.38□□□□□ -1.23
SPN1YPR133C YOR1P53049 1477 aa7.37□□□□□ -1.23
SPN1YPR133C VTH1P40438 1549 aa7.37□□□□□ -1.23
SPN1YPR133C VTH2P40890 1549 aa7.37□□□□□ -1.23
SPN1YPR133C YMR1P47147 688 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SPN1YPR133C YOL036WQ08206 761 aa7.36□□□□□ -1.23
SPN1YPR133C SPO14P36126 1683 aa7.35□□□□□ -1.23
SPN1YPR133C TSC11P40061 1430 aa7.34□□□□□ -1.23
SPN1YPR133C NUP170P38181 1502 aa7.33□□□□□ -1.24
SPN1YPR133C SET4P42948 560 aa7.33□□□□□ -1.24
SPN1YPR133C STU1P38198 1513 aa7.32□□□□□ -1.24
SPN1YPR133C DOP1Q03921 1698 aa7.32□□□□□ -1.24
SPN1YPR133C TRP5P00931 707 aaKnown RBP7.31□□□□□ -1.24
SPN1YPR133C DBP1P24784 617 aaKnown RBP7.31□□□□□ -1.24
SPN1YPR133C RTG1P32607 177 aa7.31□□□□□ -1.24
SPN1YPR133C RTG3P38165 486 aa7.31□□□□□ -1.24
SPN1YPR133C VPS29P38759 282 aa7.31□□□□□ -1.24
SPN1YPR133C YOR093CQ12275 1648 aa7.3□□□□□ -1.24
SPN1YPR133C VMA1P17255 1071 aaKnown RBP7.29□□□□□ -1.24
SPN1YPR133C ULS1Q08562 1619 aa7.28□□□□□ -1.24
SPN1YPR133C SEC61P32915 480 aa7.28□□□□□ -1.24
SPN1YPR133C YNL035CP53962 389 aaKnown RBP7.28□□□□□ -1.24
SPN1YPR133C SAM3Q08986 587 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms