RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	MLP2	P40457	1679 aa		14.98	□□□□□ -0.01
TIF6	YPR016C	NUP159	P40477	1460 aa		14.98	□□□□□ -0.01
TIF6	YPR016C	RPO21	P04050	1733 aa	Known RBP	14.96	□□□□□ -0.01
TIF6	YPR016C	SNT2	P53127	1403 aa		14.93	□□□□□ -0.02
TIF6	YPR016C	TAF7	Q05021	590 aa		14.93	□□□□□ -0.02
TIF6	YPR016C	PDR15	Q04182	1529 aa	Known RBP	14.92	□□□□□ -0.02
TIF6	YPR016C	ULS1	Q08562	1619 aa		14.92	□□□□□ -0.02
TIF6	YPR016C	YRF1-1	P0CX20	1796 aa		14.88	□□□□□ -0.03
TIF6	YPR016C	YRF1-5	P0CX21	1796 aa		14.88	□□□□□ -0.03
TIF6	YPR016C	YRF1-8	P0CX22	1796 aa		14.88	□□□□□ -0.03
TIF6	YPR016C	IFH1	P39520	1085 aa		14.85	□□□□□ -0.03
TIF6	YPR016C	RTT106	P40161	455 aa		14.85	□□□□□ -0.03
TIF6	YPR016C	GEA2	P39993	1459 aa	Known RBP	14.79	□□□□□ -0.04
TIF6	YPR016C	VPS15	P22219	1454 aa		14.78	□□□□□ -0.04
TIF6	YPR016C	LTE1	P07866	1435 aa		14.76	□□□□□ -0.05
TIF6	YPR016C	GEA1	P47102	1408 aa	Predicted RBP	14.75	□□□□□ -0.05
TIF6	YPR016C	MET10	P39692	1035 aa		14.73	□□□□□ -0.05
TIF6	YPR016C	IRC20	Q06554	1556 aa		14.7	□□□□□ -0.06
TIF6	YPR016C	SPO14	P36126	1683 aa		14.69	□□□□□ -0.06
TIF6	YPR016C	PDR12	Q02785	1511 aa		14.66	□□□□□ -0.06
TIF6	YPR016C	TY3B-G	Q99315	1547 aa		14.63	□□□□□ -0.07
TIF6	YPR016C	GDB1	Q06625	1536 aa		14.61	□□□□□ -0.07
TIF6	YPR016C	NUP157	P40064	1391 aa	Known RBP	14.6	□□□□□ -0.07
TIF6	YPR016C	YBT1	P32386	1661 aa		14.57	□□□□□ -0.08
TIF6	YPR016C	CAT8	P39113	1433 aa		14.56	□□□□□ -0.08
TIF6	YPR016C	PDR10	P51533	1564 aa		14.56	□□□□□ -0.08
TIF6	YPR016C	DRS2	P39524	1355 aa		14.54	□□□□□ -0.08
TIF6	YPR016C	NUP170	P38181	1502 aa		14.53	□□□□□ -0.08
TIF6	YPR016C	ITT1	Q04638	464 aa		14.53	□□□□□ -0.08
TIF6	YPR016C	BNI1	P41832	1953 aa		14.53	□□□□□ -0.08
TIF6	YPR016C	IQG1	Q12280	1495 aa		14.49	□□□□□ -0.09
TIF6	YPR016C	IKI3	Q06706	1349 aa	Known RBP	14.45	□□□□□ -0.1
TIF6	YPR016C	CKB1	P43639	278 aa		14.45	□□□□□ -0.1
TIF6	YPR016C	ARO1	P08566	1588 aa	Known RBP	14.44	□□□□□ -0.1
TIF6	YPR016C	BUD3	P25558	1636 aa		14.41	□□□□□ -0.1
TIF6	YPR016C	MMS1	Q06211	1407 aa		14.37	□□□□□ -0.11
TIF6	YPR016C	DOP1	Q03921	1698 aa		14.34	□□□□□ -0.11
TIF6	YPR016C	YSP2	Q06681	1438 aa		14.32	□□□□□ -0.12
TIF6	YPR016C	SSM4	P40318	1319 aa		14.32	□□□□□ -0.12
TIF6	YPR016C	SRB8	P25648	1427 aa		14.32	□□□□□ -0.12
TIF6	YPR016C	TRM3	Q07527	1436 aa		14.32	□□□□□ -0.12
TIF6	YPR016C	SEC7	P11075	2009 aa	Known RBP	14.25	□□□□□ -0.13
TIF6	YPR016C	BNR1	P40450	1375 aa		14.23	□□□□□ -0.13
TIF6	YPR016C	CHC1	P22137	1653 aa	Known RBP	14.22	□□□□□ -0.13
TIF6	YPR016C	BUD21	Q08492	214 aa	Predicted RBP	14.19	□□□□□ -0.14
TIF6	YPR016C	DNF2	Q12675	1612 aa		14.18	□□□□□ -0.14
TIF6	YPR016C	ABP1	P15891	592 aa	Known RBP	14.11	□□□□□ -0.15
TIF6	YPR016C	YOR093C	Q12275	1648 aa		14	□□□□□ -0.17
TIF6	YPR016C	GCN2	P15442	1659 aa		13.98	□□□□□ -0.17
TIF6	YPR016C	NUP188	P52593	1655 aa	Known RBP	13.92	□□□□□ -0.18
TIF6	YPR016C	YAP3	P38749	330 aa		13.91	□□□□□ -0.18
TIF6	YPR016C	VMR1	P38735	1592 aa		13.91	□□□□□ -0.18
TIF6	YPR016C	URN1	Q06525	465 aa	Known RBP	13.9	□□□□□ -0.18
TIF6	YPR016C	PDR5	P33302	1511 aa	Known RBP	13.85	□□□□□ -0.19
TIF6	YPR016C	MIF2	P35201	549 aa		13.84	□□□□□ -0.19
TIF6	YPR016C	DNF3	Q12674	1656 aa		13.84	□□□□□ -0.19
TIF6	YPR016C	IML1	P47170	1584 aa		13.83	□□□□□ -0.19
TIF6	YPR016C	IPL1	P38991	367 aa		13.83	□□□□□ -0.2
TIF6	YPR016C	TYS1	P36421	394 aa	Known RBP	13.82	□□□□□ -0.2
TIF6	YPR016C	PDR11	P40550	1411 aa		13.8	□□□□□ -0.2
TIF6	YPR016C	PAF1	P38351	445 aa		13.79	□□□□□ -0.2
TIF6	YPR016C	NOP7	P53261	605 aa	Known RBP	13.75	□□□□□ -0.21
TIF6	YPR016C	BFR2	Q06631	534 aa	Known RBP	13.71	□□□□□ -0.21
TIF6	YPR016C	RAV1	P47104	1357 aa		13.69	□□□□□ -0.22
TIF6	YPR016C	MAK10	Q02197	733 aa		13.68	□□□□□ -0.22
TIF6	YPR016C	HAP1	P0CE41	1502 aa		13.63	□□□□□ -0.23
TIF6	YPR016C	RTC1	Q08281	1341 aa		13.63	□□□□□ -0.23
TIF6	YPR016C	NUP192	P47054	1683 aa		13.55	□□□□□ -0.24
TIF6	YPR016C	USO1	P25386	1790 aa		13.53	□□□□□ -0.24
TIF6	YPR016C	TAF5	P38129	798 aa		13.51	□□□□□ -0.25
TIF6	YPR016C	KRE5	P22023	1365 aa		13.48	□□□□□ -0.25
TIF6	YPR016C	RAD9	P14737	1309 aa		13.48	□□□□□ -0.25
TIF6	YPR016C	BCK1	Q01389	1478 aa		13.47	□□□□□ -0.25
TIF6	YPR016C	ESL2	P36168	1195 aa		13.46	□□□□□ -0.25
TIF6	YPR016C	ALD4	P46367	519 aa	Known RBP	13.46	□□□□□ -0.25
TIF6	YPR016C	MRX12	P47084	519 aa		13.46	□□□□□ -0.25
TIF6	YPR016C	CAB1	Q04430	367 aa		13.46	□□□□□ -0.25
TIF6	YPR016C	YFR006W	P43590	535 aa		13.45	□□□□□ -0.26
TIF6	YPR016C	RIA1	P53893	1110 aa		13.44	□□□□□ -0.26
TIF6	YPR016C	ORC1	P54784	914 aa	Predicted RBP	13.43	□□□□□ -0.26
TIF6	YPR016C	TY1B-NL2	Q99337	1749 aa	Known RBP	13.42	□□□□□ -0.26
TIF6	YPR016C	CFT1	Q06632	1357 aa	Known RBP	13.38	□□□□□ -0.27
TIF6	YPR016C	TAF8	Q03750	510 aa		13.37	□□□□□ -0.27
TIF6	YPR016C	POL5	P39985	1022 aa	Known RBP	13.36	□□□□□ -0.27
TIF6	YPR016C	YMR196W	Q04336	1088 aa		13.36	□□□□□ -0.27
TIF6	YPR016C	TY3B-I	Q7LHG5	1498 aa	Known RBP	13.36	□□□□□ -0.27
TIF6	YPR016C	KIP3	P53086	805 aa	Known RBP	13.35	□□□□□ -0.27
TIF6	YPR016C	THI12	P42883	340 aa		13.33	□□□□□ -0.28
TIF6	YPR016C	THI5	P43534	340 aa		13.33	□□□□□ -0.28
TIF6	YPR016C	THI11	P47183	340 aa		13.33	□□□□□ -0.28
TIF6	YPR016C	THI13	Q07748	340 aa		13.33	□□□□□ -0.28
TIF6	YPR016C	NAP1	P25293	417 aa	Known RBP	13.32	□□□□□ -0.28
TIF6	YPR016C	YNR029C	P53729	429 aa	Known RBP	13.31	□□□□□ -0.28
TIF6	YPR016C	SPE2	P21182	396 aa		13.29	□□□□□ -0.28
TIF6	YPR016C	YLR419W	Q06698	1435 aa	Known RBP	13.27	□□□□□ -0.29
TIF6	YPR016C	RCM1	P53972	490 aa		13.21	□□□□□ -0.29
TIF6	YPR016C	CHZ1	P40019	153 aa	Predicted RBP	13.17	□□□□□ -0.3
TIF6	YPR016C	PPH3	P32345	308 aa		13.16	□□□□□ -0.3
TIF6	YPR016C	MHP1	P43638	1398 aa		13.14	□□□□□ -0.31
TIF6	YPR016C	CPS1	P27614	576 aa		13.13	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms