RNA–Protein interactions for RNA: YPL183C

RTT10, Transcript of WD40 domain-containing protein involved in endosomal recycling, yeast

Gene RTT10, Length 3,042 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT10	YPL183C	TY1B-ER1	Q03612	1755 aa		4.18	□□□□□ -1.74
RTT10	YPL183C	TY1B-ML1	Q04711	1755 aa	Known RBP	4.18	□□□□□ -1.74
RTT10	YPL183C	TY1B-GR2	Q12269	1755 aa		4.18	□□□□□ -1.74
RTT10	YPL183C	TY1B-OL	Q12273	1755 aa		4.18	□□□□□ -1.74
RTT10	YPL183C	TY1B-PL	Q12414	1755 aa	Known RBP	4.18	□□□□□ -1.74
RTT10	YPL183C	YTA7	P40340	1379 aa		4.17	□□□□□ -1.74
RTT10	YPL183C	MLP2	P40457	1679 aa		4.17	□□□□□ -1.74
RTT10	YPL183C	RKR1	Q04781	1562 aa		4.17	□□□□□ -1.74
RTT10	YPL183C	TAF2	P23255	1407 aa		4.17	□□□□□ -1.74
RTT10	YPL183C	YCF1	P39109	1515 aa	Known RBP	4.17	□□□□□ -1.74
RTT10	YPL183C	TY1B-BR	Q12193	1756 aa		4.16	□□□□□ -1.74
RTT10	YPL183C	TY1B-GR3	Q12316	1755 aa		4.16	□□□□□ -1.74
RTT10	YPL183C	TY1B-OR	Q92393	1755 aa		4.16	□□□□□ -1.74
RTT10	YPL183C	MRPL32	P25348	183 aa		4.14	□□□□□ -1.75
RTT10	YPL183C	AI2	P03876	854 aa		4.13	□□□□□ -1.75
RTT10	YPL183C	TOP2	P06786	1428 aa	Known RBP	4.13	□□□□□ -1.75
RTT10	YPL183C	MDS3	P53094	1487 aa		4.12	□□□□□ -1.75
RTT10	YPL183C	ULS1	Q08562	1619 aa		4.12	□□□□□ -1.75
RTT10	YPL183C	PDR5	P33302	1511 aa	Known RBP	4.12	□□□□□ -1.75
RTT10	YPL183C	LEO1	P38439	464 aa		4.11	□□□□□ -1.75
RTT10	YPL183C	RAM2	P29703	316 aa		4.11	□□□□□ -1.75
RTT10	YPL183C	ESC1	Q03661	1658 aa	Known RBP	4.1	□□□□□ -1.75
RTT10	YPL183C	RCR1	P38212	213 aa		4.1	□□□□□ -1.75
RTT10	YPL183C	IRC20	Q06554	1556 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-JR2	P47100	1755 aa	Known RBP	4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-ER2	Q03619	1755 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-MR1	Q04214	1755 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-NL1	Q12112	1755 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-GR1	Q12141	1755 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	TY1B-BL	Q12490	1755 aa		4.09	□□□□□ -1.75
RTT10	YPL183C	SPP41	P38904	1435 aa		4.08	□□□□□ -1.76
RTT10	YPL183C	SNQ2	P32568	1501 aa	Known RBP	4.08	□□□□□ -1.76
RTT10	YPL183C	BDF1	P35817	686 aa		4.08	□□□□□ -1.76
RTT10	YPL183C	YBT1	P32386	1661 aa		4.08	□□□□□ -1.76
RTT10	YPL183C	LEU3	P08638	886 aa		4.08	□□□□□ -1.76
RTT10	YPL183C	EPS1	P40557	701 aa		4.08	□□□□□ -1.76
RTT10	YPL183C	TAF7	Q05021	590 aa		4.07	□□□□□ -1.76
RTT10	YPL183C	BPT1	P14772	1559 aa		4.07	□□□□□ -1.76
RTT10	YPL183C	RPO21	P04050	1733 aa	Known RBP	4.06	□□□□□ -1.76
RTT10	YPL183C	YPR148C	Q06523	435 aa		4.05	□□□□□ -1.76
RTT10	YPL183C	NTE1	Q04958	1679 aa		4.05	□□□□□ -1.76
RTT10	YPL183C	TRM732	Q03496	1420 aa		4.04	□□□□□ -1.76
RTT10	YPL183C	SNT2	P53127	1403 aa		4.04	□□□□□ -1.76
RTT10	YPL183C	HAA1	Q12753	694 aa	Known RBP	4.03	□□□□□ -1.76
RTT10	YPL183C	TY3B-G	Q99315	1547 aa		4.03	□□□□□ -1.76
RTT10	YPL183C	GCN2	P15442	1659 aa		4.03	□□□□□ -1.76
RTT10	YPL183C	CDC25	P04821	1589 aa		4.03	□□□□□ -1.76
RTT10	YPL183C	VPS29	P38759	282 aa		4.02	□□□□□ -1.77
RTT10	YPL183C	IQG1	Q12280	1495 aa		4.01	□□□□□ -1.77
RTT10	YPL183C	RPA190	P10964	1664 aa	Known RBP	4.01	□□□□□ -1.77
RTT10	YPL183C	IKI3	Q06706	1349 aa	Known RBP	4.01	□□□□□ -1.77
RTT10	YPL183C	VTH1	P40438	1549 aa		4.01	□□□□□ -1.77
RTT10	YPL183C	VTH2	P40890	1549 aa		4.01	□□□□□ -1.77
RTT10	YPL183C	PDR15	Q04182	1529 aa	Known RBP	4	□□□□□ -1.77
RTT10	YPL183C	ABP1	P15891	592 aa	Known RBP	4	□□□□□ -1.77
RTT10	YPL183C	MRM1	P25270	412 aa		4	□□□□□ -1.77
RTT10	YPL183C	MAP2	P38174	421 aa	Known RBP	4	□□□□□ -1.77
RTT10	YPL183C	PDR12	Q02785	1511 aa		3.99	□□□□□ -1.77
RTT10	YPL183C	CAT8	P39113	1433 aa		3.99	□□□□□ -1.77
RTT10	YPL183C	SET1	P38827	1080 aa	Known RBP	3.97	□□□□□ -1.77
RTT10	YPL183C	MAK11	P20484	414 aa	Known RBP	3.97	□□□□□ -1.77
RTT10	YPL183C	BBC1	P47068	1157 aa		3.97	□□□□□ -1.77
RTT10	YPL183C	SCY1	P53009	804 aa		3.96	□□□□□ -1.78
RTT10	YPL183C	UBP10	P53874	792 aa	Predicted RBP	3.96	□□□□□ -1.78
RTT10	YPL183C	GEA2	P39993	1459 aa	Known RBP	3.96	□□□□□ -1.78
RTT10	YPL183C	SPB4	P25808	606 aa	Predicted RBP	3.95	□□□□□ -1.78
RTT10	YPL183C	RTG3	P38165	486 aa		3.95	□□□□□ -1.78
RTT10	YPL183C	PAN1	P32521	1480 aa		3.94	□□□□□ -1.78
RTT10	YPL183C	STS1	P38637	319 aa		3.94	□□□□□ -1.78
RTT10	YPL183C	TSC11	P40061	1430 aa		3.94	□□□□□ -1.78
RTT10	YPL183C	GEA1	P47102	1408 aa	Predicted RBP	3.93	□□□□□ -1.78
RTT10	YPL183C	GDB1	Q06625	1536 aa		3.93	□□□□□ -1.78
RTT10	YPL183C	EDS1	P38073	919 aa		3.93	□□□□□ -1.78
RTT10	YPL183C	STH1	P32597	1359 aa		3.92	□□□□□ -1.78
RTT10	YPL183C	DSF2	P38213	736 aa		3.92	□□□□□ -1.78
RTT10	YPL183C	HAP1	P0CE41	1502 aa		3.92	□□□□□ -1.78
RTT10	YPL183C	ARO1	P08566	1588 aa	Known RBP	3.91	□□□□□ -1.78
RTT10	YPL183C	CHC1	P22137	1653 aa	Known RBP	3.91	□□□□□ -1.78
RTT10	YPL183C	NUP159	P40477	1460 aa		3.91	□□□□□ -1.78
RTT10	YPL183C	YOR093C	Q12275	1648 aa		3.9	□□□□□ -1.78
RTT10	YPL183C	BUD3	P25558	1636 aa		3.9	□□□□□ -1.79
RTT10	YPL183C	COQ8	P27697	501 aa		3.89	□□□□□ -1.79
RTT10	YPL183C	SPO14	P36126	1683 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	YRF1-1	P0CX20	1796 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	YRF1-5	P0CX21	1796 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	YRF1-8	P0CX22	1796 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
RTT10	YPL183C	NOP53	Q12080	455 aa	Known RBP	3.88	□□□□□ -1.79
RTT10	YPL183C	VPS15	P22219	1454 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	DNF1	P32660	1571 aa		3.88	□□□□□ -1.79
RTT10	YPL183C	VPS70	P47161	811 aa		3.87	□□□□□ -1.79
RTT10	YPL183C	NUP42	P49686	430 aa	Known RBP	3.87	□□□□□ -1.79
RTT10	YPL183C	RPN1	P38764	993 aa	Known RBP	3.87	□□□□□ -1.79
RTT10	YPL183C	CKB1	P43639	278 aa		3.87	□□□□□ -1.79
RTT10	YPL183C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.86	□□□□□ -1.79
RTT10	YPL183C	NST1	P53935	1240 aa		3.86	□□□□□ -1.79
RTT10	YPL183C	YGL015C	P33199	130 aa		3.86	□□□□□ -1.79
RTT10	YPL183C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms