RNA–Protein interactions for RNA: YPL183C

RTT10, Transcript of WD40 domain-containing protein involved in endosomal recycling, yeastyeast

Gene RTT10, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT10YPL183C TY1B-ER1Q03612 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-ML1Q04711 1755 aaKnown RBP4.18□□□□□ -1.74
RTT10YPL183C TY1B-GR2Q12269 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-OLQ12273 1755 aa4.18□□□□□ -1.74
RTT10YPL183C TY1B-PLQ12414 1755 aaKnown RBP4.18□□□□□ -1.74
RTT10YPL183C YTA7P40340 1379 aa4.17□□□□□ -1.74
RTT10YPL183C MLP2P40457 1679 aa4.17□□□□□ -1.74
RTT10YPL183C RKR1Q04781 1562 aa4.17□□□□□ -1.74
RTT10YPL183C TAF2P23255 1407 aa4.17□□□□□ -1.74
RTT10YPL183C YCF1P39109 1515 aaKnown RBP4.17□□□□□ -1.74
RTT10YPL183C TY1B-BRQ12193 1756 aa4.16□□□□□ -1.74
RTT10YPL183C TY1B-GR3Q12316 1755 aa4.16□□□□□ -1.74
RTT10YPL183C TY1B-ORQ92393 1755 aa4.16□□□□□ -1.74
RTT10YPL183C MRPL32P25348 183 aa4.14□□□□□ -1.75
RTT10YPL183C AI2P03876 854 aa4.13□□□□□ -1.75
RTT10YPL183C TOP2P06786 1428 aaKnown RBP4.13□□□□□ -1.75
RTT10YPL183C MDS3P53094 1487 aa4.12□□□□□ -1.75
RTT10YPL183C ULS1Q08562 1619 aa4.12□□□□□ -1.75
RTT10YPL183C PDR5P33302 1511 aaKnown RBP4.12□□□□□ -1.75
RTT10YPL183C LEO1P38439 464 aa4.11□□□□□ -1.75
RTT10YPL183C RAM2P29703 316 aa4.11□□□□□ -1.75
RTT10YPL183C ESC1Q03661 1658 aaKnown RBP4.1□□□□□ -1.75
RTT10YPL183C RCR1P38212 213 aa4.1□□□□□ -1.75
RTT10YPL183C IRC20Q06554 1556 aa4.09□□□□□ -1.75
RTT10YPL183C TY1B-JR2P47100 1755 aaKnown RBP4.09□□□□□ -1.75
RTT10YPL183C TY1B-ER2Q03619 1755 aa4.09□□□□□ -1.75
RTT10YPL183C TY1B-MR1Q04214 1755 aa4.09□□□□□ -1.75
RTT10YPL183C TY1B-MR2Q04670 1755 aaKnown RBP4.09□□□□□ -1.75
RTT10YPL183C TY1B-LR1Q12088 1755 aaKnown RBP4.09□□□□□ -1.75
RTT10YPL183C TY1B-NL1Q12112 1755 aa4.09□□□□□ -1.75
RTT10YPL183C TY1B-GR1Q12141 1755 aa4.09□□□□□ -1.75
RTT10YPL183C TY1B-BLQ12490 1755 aa4.09□□□□□ -1.75
RTT10YPL183C SPP41P38904 1435 aa4.08□□□□□ -1.76
RTT10YPL183C SNQ2P32568 1501 aaKnown RBP4.08□□□□□ -1.76
RTT10YPL183C BDF1P35817 686 aa4.08□□□□□ -1.76
RTT10YPL183C YBT1P32386 1661 aa4.08□□□□□ -1.76
RTT10YPL183C LEU3P08638 886 aa4.08□□□□□ -1.76
RTT10YPL183C EPS1P40557 701 aa4.08□□□□□ -1.76
RTT10YPL183C TAF7Q05021 590 aa4.07□□□□□ -1.76
RTT10YPL183C BPT1P14772 1559 aa4.07□□□□□ -1.76
RTT10YPL183C RPO21P04050 1733 aaKnown RBP4.06□□□□□ -1.76
RTT10YPL183C YPR148CQ06523 435 aa4.05□□□□□ -1.76
RTT10YPL183C NTE1Q04958 1679 aa4.05□□□□□ -1.76
RTT10YPL183C TRM732Q03496 1420 aa4.04□□□□□ -1.76
RTT10YPL183C SNT2P53127 1403 aa4.04□□□□□ -1.76
RTT10YPL183C HAA1Q12753 694 aaKnown RBP4.03□□□□□ -1.76
RTT10YPL183C TY3B-GQ99315 1547 aa4.03□□□□□ -1.76
RTT10YPL183C GCN2P15442 1659 aa4.03□□□□□ -1.76
RTT10YPL183C CDC25P04821 1589 aa4.03□□□□□ -1.76
RTT10YPL183C VPS29P38759 282 aa4.02□□□□□ -1.77
RTT10YPL183C IQG1Q12280 1495 aa4.01□□□□□ -1.77
RTT10YPL183C RPA190P10964 1664 aaKnown RBP4.01□□□□□ -1.77
RTT10YPL183C IKI3Q06706 1349 aaKnown RBP4.01□□□□□ -1.77
RTT10YPL183C VTH1P40438 1549 aa4.01□□□□□ -1.77
RTT10YPL183C VTH2P40890 1549 aa4.01□□□□□ -1.77
RTT10YPL183C PDR15Q04182 1529 aaKnown RBP4□□□□□ -1.77
RTT10YPL183C ABP1P15891 592 aaKnown RBP4□□□□□ -1.77
RTT10YPL183C MRM1P25270 412 aa4□□□□□ -1.77
RTT10YPL183C MAP2P38174 421 aaKnown RBP4□□□□□ -1.77
RTT10YPL183C PDR12Q02785 1511 aa3.99□□□□□ -1.77
RTT10YPL183C CAT8P39113 1433 aa3.99□□□□□ -1.77
RTT10YPL183C SET1P38827 1080 aaKnown RBP3.97□□□□□ -1.77
RTT10YPL183C MAK11P20484 414 aaKnown RBP3.97□□□□□ -1.77
RTT10YPL183C BBC1P47068 1157 aa3.97□□□□□ -1.77
RTT10YPL183C SCY1P53009 804 aa3.96□□□□□ -1.78
RTT10YPL183C UBP10P53874 792 aaPredicted RBP3.96□□□□□ -1.78
RTT10YPL183C GEA2P39993 1459 aaKnown RBP3.96□□□□□ -1.78
RTT10YPL183C SPB4P25808 606 aaPredicted RBP3.95□□□□□ -1.78
RTT10YPL183C RTG3P38165 486 aa3.95□□□□□ -1.78
RTT10YPL183C PAN1P32521 1480 aa3.94□□□□□ -1.78
RTT10YPL183C STS1P38637 319 aa3.94□□□□□ -1.78
RTT10YPL183C TSC11P40061 1430 aa3.94□□□□□ -1.78
RTT10YPL183C GEA1P47102 1408 aaPredicted RBP3.93□□□□□ -1.78
RTT10YPL183C GDB1Q06625 1536 aa3.93□□□□□ -1.78
RTT10YPL183C EDS1P38073 919 aa3.93□□□□□ -1.78
RTT10YPL183C STH1P32597 1359 aa3.92□□□□□ -1.78
RTT10YPL183C DSF2P38213 736 aa3.92□□□□□ -1.78
RTT10YPL183C HAP1P0CE41 1502 aa3.92□□□□□ -1.78
RTT10YPL183C ARO1P08566 1588 aaKnown RBP3.91□□□□□ -1.78
RTT10YPL183C CHC1P22137 1653 aaKnown RBP3.91□□□□□ -1.78
RTT10YPL183C NUP159P40477 1460 aa3.91□□□□□ -1.78
RTT10YPL183C YOR093CQ12275 1648 aa3.9□□□□□ -1.78
RTT10YPL183C BUD3P25558 1636 aa3.9□□□□□ -1.79
RTT10YPL183C COQ8P27697 501 aa3.89□□□□□ -1.79
RTT10YPL183C SPO14P36126 1683 aa3.88□□□□□ -1.79
RTT10YPL183C YRF1-1P0CX20 1796 aa3.88□□□□□ -1.79
RTT10YPL183C YRF1-5P0CX21 1796 aa3.88□□□□□ -1.79
RTT10YPL183C YRF1-8P0CX22 1796 aa3.88□□□□□ -1.79
RTT10YPL183C NSR1P27476 414 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
RTT10YPL183C NOP53Q12080 455 aaKnown RBP3.88□□□□□ -1.79
RTT10YPL183C VPS15P22219 1454 aa3.88□□□□□ -1.79
RTT10YPL183C DNF1P32660 1571 aa3.88□□□□□ -1.79
RTT10YPL183C VPS70P47161 811 aa3.87□□□□□ -1.79
RTT10YPL183C NUP42P49686 430 aaKnown RBP3.87□□□□□ -1.79
RTT10YPL183C RPN1P38764 993 aaKnown RBP3.87□□□□□ -1.79
RTT10YPL183C CKB1P43639 278 aa3.87□□□□□ -1.79
RTT10YPL183C TY3B-IQ7LHG5 1498 aaKnown RBP3.86□□□□□ -1.79
RTT10YPL183C NST1P53935 1240 aa3.86□□□□□ -1.79
RTT10YPL183C YGL015CP33199 130 aa3.86□□□□□ -1.79
RTT10YPL183C YMR1P47147 688 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms