RNA–Protein interactions for RNA: YPL022W

RAD1, Transcript of Single-stranded DNA endonuclease (with Rad10p), yeast

Gene RAD1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD1	YPL022W	NNF2	P53253	936 aa		4.98	□□□□□ -1.61
RAD1	YPL022W	SRB8	P25648	1427 aa		4.97	□□□□□ -1.61
RAD1	YPL022W	PIL1	P53252	339 aa	Known RBP	4.97	□□□□□ -1.61
RAD1	YPL022W	PRP3	Q03338	469 aa	Predicted RBP	4.97	□□□□□ -1.61
RAD1	YPL022W	ETT1	Q08421	412 aa	Known RBP	4.97	□□□□□ -1.61
RAD1	YPL022W	IFH1	P39520	1085 aa		4.97	□□□□□ -1.61
RAD1	YPL022W	MMS1	Q06211	1407 aa		4.96	□□□□□ -1.61
RAD1	YPL022W	IOC4	Q04213	475 aa		4.95	□□□□□ -1.62
RAD1	YPL022W	NOT3	P06102	836 aa	Known RBP	4.94	□□□□□ -1.62
RAD1	YPL022W	LTV1	P34078	463 aa		4.94	□□□□□ -1.62
RAD1	YPL022W	ARL1	P38116	183 aa	Known RBP	4.94	□□□□□ -1.62
RAD1	YPL022W	SIC1	P38634	284 aa		4.94	□□□□□ -1.62
RAD1	YPL022W	VPS4	P52917	437 aa		4.94	□□□□□ -1.62
RAD1	YPL022W	PCT1	P13259	424 aa		4.94	□□□□□ -1.62
RAD1	YPL022W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RAD1	YPL022W	VPS24	P36095	224 aa	Known RBP	4.93	□□□□□ -1.62
RAD1	YPL022W	TPM2	P40414	161 aa		4.93	□□□□□ -1.62
RAD1	YPL022W	ECM16	Q04217	1267 aa	Known RBP	4.93	□□□□□ -1.62
RAD1	YPL022W	YIR014W	P40570	242 aa		4.93	□□□□□ -1.62
RAD1	YPL022W	CLB1	P24868	471 aa		4.92	□□□□□ -1.62
RAD1	YPL022W	PAP2	P53632	584 aa	Known RBP	4.92	□□□□□ -1.62
RAD1	YPL022W	ORC1	P54784	914 aa	Predicted RBP	4.92	□□□□□ -1.62
RAD1	YPL022W	PDR10	P51533	1564 aa		4.92	□□□□□ -1.62
RAD1	YPL022W	SMC4	Q12267	1418 aa		4.92	□□□□□ -1.62
RAD1	YPL022W	MSP1	P28737	362 aa		4.92	□□□□□ -1.62
RAD1	YPL022W	RPN7	Q06103	429 aa	Known RBP	4.92	□□□□□ -1.62
RAD1	YPL022W	SPB4	P25808	606 aa	Predicted RBP	4.92	□□□□□ -1.62
RAD1	YPL022W	SPT6	P23615	1451 aa	Known RBP	4.92	□□□□□ -1.62
RAD1	YPL022W	KNS1	P32350	737 aa	Predicted RBP	4.91	□□□□□ -1.62
RAD1	YPL022W	MYO2	P19524	1574 aa	Known RBP	4.91	□□□□□ -1.62
RAD1	YPL022W	YLR419W	Q06698	1435 aa	Known RBP	4.91	□□□□□ -1.62
RAD1	YPL022W	RAD2	P07276	1031 aa		4.9	□□□□□ -1.62
RAD1	YPL022W	ABP1	P15891	592 aa	Known RBP	4.9	□□□□□ -1.62
RAD1	YPL022W	DEP1	P31385	405 aa		4.9	□□□□□ -1.62
RAD1	YPL022W	TAN1	P53072	289 aa	Predicted RBP	4.9	□□□□□ -1.62
RAD1	YPL022W	KIP3	P53086	805 aa	Known RBP	4.9	□□□□□ -1.62
RAD1	YPL022W	YSH1	Q06224	779 aa	Predicted RBP	4.9	□□□□□ -1.62
RAD1	YPL022W	ESC2	Q06340	456 aa		4.9	□□□□□ -1.62
RAD1	YPL022W	BMS1	Q08965	1183 aa	Known RBP	4.9	□□□□□ -1.62
RAD1	YPL022W	PEP1	P32319	1579 aa		4.9	□□□□□ -1.63
RAD1	YPL022W	NST1	P53935	1240 aa		4.9	□□□□□ -1.63
RAD1	YPL022W	MED8	P38304	223 aa		4.89	□□□□□ -1.63
RAD1	YPL022W	ECM1	P39715	212 aa		4.89	□□□□□ -1.63
RAD1	YPL022W	PAN1	P32521	1480 aa		4.89	□□□□□ -1.63
RAD1	YPL022W	EDE1	P34216	1381 aa		4.88	□□□□□ -1.63
RAD1	YPL022W	RPS0A	P32905	252 aa	Known RBP	4.88	□□□□□ -1.63
RAD1	YPL022W	BYE1	P36106	594 aa		4.87	□□□□□ -1.63
RAD1	YPL022W	VPS60	Q03390	229 aa		4.87	□□□□□ -1.63
RAD1	YPL022W	NOP8	Q08287	484 aa	Predicted RBP	4.87	□□□□□ -1.63
RAD1	YPL022W	MYO4	P32492	1471 aa		4.87	□□□□□ -1.63
RAD1	YPL022W	RNT1	Q02555	471 aa		4.87	□□□□□ -1.63
RAD1	YPL022W	UTP13	Q05946	817 aa	Known RBP	4.87	□□□□□ -1.63
RAD1	YPL022W	RIM101	P33400	625 aa		4.86	□□□□□ -1.63
RAD1	YPL022W	RRP14	P36080	434 aa	Known RBP	4.86	□□□□□ -1.63
RAD1	YPL022W	TCD1	P38756	429 aa		4.86	□□□□□ -1.63
RAD1	YPL022W	RSC1	P53236	928 aa		4.86	□□□□□ -1.63
RAD1	YPL022W	TAF2	P23255	1407 aa		4.86	□□□□□ -1.63
RAD1	YPL022W	SAP190	P36123	1033 aa		4.85	□□□□□ -1.63
RAD1	YPL022W	MDG1	P53885	366 aa		4.85	□□□□□ -1.63
RAD1	YPL022W	RVB2	Q12464	471 aa	Known RBP	4.85	□□□□□ -1.63
RAD1	YPL022W	NOP14	Q99207	810 aa	Known RBP	4.85	□□□□□ -1.63
RAD1	YPL022W	MHP1	P43638	1398 aa		4.85	□□□□□ -1.63
RAD1	YPL022W	HOS3	Q02959	697 aa	Known RBP	4.85	□□□□□ -1.63
RAD1	YPL022W	CIN4	P39110	191 aa		4.84	□□□□□ -1.63
RAD1	YPL022W	TEA1	P47988	759 aa		4.84	□□□□□ -1.63
RAD1	YPL022W	CDC45	Q08032	650 aa		4.84	□□□□□ -1.63
RAD1	YPL022W	YPK9	Q12697	1472 aa		4.84	□□□□□ -1.64
RAD1	YPL022W	LCD1	Q04377	747 aa		4.84	□□□□□ -1.64
RAD1	YPL022W	SRP54	P20424	541 aa	Known RBP	4.83	□□□□□ -1.64
RAD1	YPL022W	SNU71	P53207	620 aa	Known RBP	4.83	□□□□□ -1.64
RAD1	YPL022W	UBP10	P53874	792 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD1	YPL022W	THO2	P53552	1597 aa	Known RBP	4.83	□□□□□ -1.64
RAD1	YPL022W	VPS27	P40343	622 aa	Known RBP	4.83	□□□□□ -1.64
RAD1	YPL022W	BDP1	P46678	594 aa		4.83	□□□□□ -1.64
RAD1	YPL022W	SWH1	P35845	1188 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	ITC1	P53125	1264 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	PDS5	Q04264	1277 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	SFI1	Q12369	946 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	RAD51	P25454	400 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	PSE1	P32337	1089 aa	Known RBP	4.82	□□□□□ -1.64
RAD1	YPL022W	MDM38	Q08179	573 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	SWI3	P32591	825 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	COG8	Q04632	607 aa		4.82	□□□□□ -1.64
RAD1	YPL022W	TOP1	P04786	769 aa		4.81	□□□□□ -1.64
RAD1	YPL022W	TIF4632	P39936	914 aa	Known RBP	4.81	□□□□□ -1.64
RAD1	YPL022W	STU1	P38198	1513 aa		4.81	□□□□□ -1.64
RAD1	YPL022W	CHZ1	P40019	153 aa	Predicted RBP	4.81	□□□□□ -1.64
RAD1	YPL022W	MGA2	P40578	1113 aa		4.81	□□□□□ -1.64
RAD1	YPL022W	MCM2	P29469	868 aa		4.8	□□□□□ -1.64
RAD1	YPL022W	PUP2	P32379	260 aa		4.8	□□□□□ -1.64
RAD1	YPL022W	YGL140C	P53120	1219 aa		4.8	□□□□□ -1.64
RAD1	YPL022W	PUS1	Q12211	544 aa	Known RBP	4.8	□□□□□ -1.64
RAD1	YPL022W	SCC2	Q04002	1493 aa		4.8	□□□□□ -1.64
RAD1	YPL022W	GDT1	P38301	280 aa	Predicted RBP	4.8	□□□□□ -1.64
RAD1	YPL022W	LSP1	Q12230	341 aa	Known RBP	4.8	□□□□□ -1.64
RAD1	YPL022W	TLG1	Q03322	224 aa		4.8	□□□□□ -1.64
RAD1	YPL022W	SSA1	P10591	642 aa	Known RBP	4.79	□□□□□ -1.64
RAD1	YPL022W	SSA2	P10592	639 aa	Known RBP	4.79	□□□□□ -1.64
RAD1	YPL022W	MIC60	P36112	540 aa		4.79	□□□□□ -1.64
RAD1	YPL022W	RSC8	P43609	557 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms