RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W TY1B-PR1P0C2I9 1755 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W TY1B-PR2P0C2J0 1756 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-PR3P0C2J1 1755 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W TY1B-JR1P47098 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-ML2Q03434 1755 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W TY1B-ER1Q03612 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-ML1Q04711 1755 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W TY1B-GR2Q12269 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-OLQ12273 1755 aa5.74□□□□□ -1.49
CHL1YPL008W TY1B-PLQ12414 1755 aaKnown RBP5.74□□□□□ -1.49
CHL1YPL008W NUP170P38181 1502 aa5.73□□□□□ -1.49
CHL1YPL008W PDR15Q04182 1529 aaKnown RBP5.73□□□□□ -1.49
CHL1YPL008W TY1B-BRQ12193 1756 aa5.73□□□□□ -1.49
CHL1YPL008W TY1B-GR3Q12316 1755 aa5.73□□□□□ -1.49
CHL1YPL008W TY1B-ORQ92393 1755 aa5.73□□□□□ -1.49
CHL1YPL008W YKR023WP36119 530 aaKnown RBP5.72□□□□□ -1.49
CHL1YPL008W GEA1P47102 1408 aaPredicted RBP5.72□□□□□ -1.49
CHL1YPL008W SNT2P53127 1403 aa5.72□□□□□ -1.49
CHL1YPL008W ULS1Q08562 1619 aa5.7□□□□□ -1.5
CHL1YPL008W CAT8P39113 1433 aa5.69□□□□□ -1.5
CHL1YPL008W GEA2P39993 1459 aaKnown RBP5.69□□□□□ -1.5
CHL1YPL008W IFH1P39520 1085 aa5.67□□□□□ -1.5
CHL1YPL008W MGA2P40578 1113 aa5.67□□□□□ -1.5
CHL1YPL008W RTT106P40161 455 aa5.67□□□□□ -1.5
CHL1YPL008W ESC1Q03661 1658 aaKnown RBP5.65□□□□□ -1.51
CHL1YPL008W PSD2P53037 1138 aaKnown RBP5.64□□□□□ -1.51
CHL1YPL008W TY1B-JR2P47100 1755 aaKnown RBP5.64□□□□□ -1.51
CHL1YPL008W TY1B-ER2Q03619 1755 aa5.64□□□□□ -1.51
CHL1YPL008W TY1B-MR1Q04214 1755 aa5.64□□□□□ -1.51
CHL1YPL008W TY1B-MR2Q04670 1755 aaKnown RBP5.64□□□□□ -1.51
CHL1YPL008W TY1B-LR1Q12088 1755 aaKnown RBP5.64□□□□□ -1.51
CHL1YPL008W TY1B-NL1Q12112 1755 aa5.64□□□□□ -1.51
CHL1YPL008W TY1B-GR1Q12141 1755 aa5.64□□□□□ -1.51
CHL1YPL008W TY1B-BLQ12490 1755 aa5.64□□□□□ -1.51
CHL1YPL008W NTE1Q04958 1679 aa5.64□□□□□ -1.51
CHL1YPL008W IRC20Q06554 1556 aa5.63□□□□□ -1.51
CHL1YPL008W RPA190P10964 1664 aaKnown RBP5.63□□□□□ -1.51
CHL1YPL008W RPO21P04050 1733 aaKnown RBP5.62□□□□□ -1.51
CHL1YPL008W RPN1P38764 993 aaKnown RBP5.62□□□□□ -1.51
CHL1YPL008W SSM4P40318 1319 aa5.61□□□□□ -1.51
CHL1YPL008W VPS15P22219 1454 aa5.61□□□□□ -1.51
CHL1YPL008W NUP159P40477 1460 aa5.61□□□□□ -1.51
CHL1YPL008W TY3B-GQ99315 1547 aa5.61□□□□□ -1.51
CHL1YPL008W RAM2P29703 316 aa5.61□□□□□ -1.51
CHL1YPL008W MET5P47169 1442 aa5.6□□□□□ -1.51
CHL1YPL008W DNF1P32660 1571 aa5.6□□□□□ -1.51
CHL1YPL008W PDR12Q02785 1511 aa5.6□□□□□ -1.51
CHL1YPL008W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
CHL1YPL008W SRB8P25648 1427 aa5.59□□□□□ -1.52
CHL1YPL008W MET10P39692 1035 aa5.59□□□□□ -1.52
CHL1YPL008W YPR148CQ06523 435 aa5.58□□□□□ -1.52
CHL1YPL008W PDR10P51533 1564 aa5.58□□□□□ -1.52
CHL1YPL008W YBT1P32386 1661 aa5.58□□□□□ -1.52
CHL1YPL008W TSR3Q12094 313 aaKnown RBP5.58□□□□□ -1.52
CHL1YPL008W RCR1P38212 213 aa5.57□□□□□ -1.52
CHL1YPL008W RSM7P47150 247 aa5.57□□□□□ -1.52
CHL1YPL008W MMS1Q06211 1407 aa5.56□□□□□ -1.52
CHL1YPL008W DCD1P06773 312 aa5.55□□□□□ -1.52
CHL1YPL008W GDB1Q06625 1536 aa5.54□□□□□ -1.52
CHL1YPL008W RLF2Q12495 606 aa5.54□□□□□ -1.52
CHL1YPL008W BUD3P25558 1636 aa5.54□□□□□ -1.52
CHL1YPL008W AAD16Q02895 342 aa5.54□□□□□ -1.52
CHL1YPL008W IQG1Q12280 1495 aa5.53□□□□□ -1.52
CHL1YPL008W CKB1P43639 278 aa5.53□□□□□ -1.52
CHL1YPL008W ARO1P08566 1588 aaKnown RBP5.53□□□□□ -1.52
CHL1YPL008W TFC8Q12308 588 aa5.53□□□□□ -1.52
CHL1YPL008W NUP157P40064 1391 aaKnown RBP5.52□□□□□ -1.53
CHL1YPL008W YIL055CP40523 627 aaKnown RBP5.52□□□□□ -1.53
CHL1YPL008W HOP09932 586 aa5.51□□□□□ -1.53
CHL1YPL008W GCN2P15442 1659 aa5.51□□□□□ -1.53
CHL1YPL008W SET1P38827 1080 aaKnown RBP5.5□□□□□ -1.53
CHL1YPL008W SPO14P36126 1683 aa5.5□□□□□ -1.53
CHL1YPL008W BUD21Q08492 214 aaPredicted RBP5.49□□□□□ -1.53
CHL1YPL008W POL5P39985 1022 aaKnown RBP5.48□□□□□ -1.53
CHL1YPL008W DSF2P38213 736 aa5.48□□□□□ -1.53
CHL1YPL008W AI2P03876 854 aa5.47□□□□□ -1.53
CHL1YPL008W YRF1-1P0CX20 1796 aa5.47□□□□□ -1.53
CHL1YPL008W YRF1-5P0CX21 1796 aa5.47□□□□□ -1.53
CHL1YPL008W YRF1-8P0CX22 1796 aa5.47□□□□□ -1.53
CHL1YPL008W PDR5P33302 1511 aaKnown RBP5.46□□□□□ -1.53
CHL1YPL008W LTE1P07866 1435 aa5.46□□□□□ -1.53
CHL1YPL008W YSP2Q06681 1438 aa5.46□□□□□ -1.53
CHL1YPL008W ORC1P54784 914 aaPredicted RBP5.46□□□□□ -1.54
CHL1YPL008W TRM3Q07527 1436 aa5.46□□□□□ -1.54
CHL1YPL008W PAF1P38351 445 aa5.46□□□□□ -1.54
CHL1YPL008W VPS70P47161 811 aa5.46□□□□□ -1.54
CHL1YPL008W NOP7P53261 605 aaKnown RBP5.46□□□□□ -1.54
CHL1YPL008W SCT1P32784 759 aa5.45□□□□□ -1.54
CHL1YPL008W SEC3P33332 1336 aaKnown RBP5.44□□□□□ -1.54
CHL1YPL008W CDC27P38042 758 aa5.43□□□□□ -1.54
CHL1YPL008W BNR1P40450 1375 aa5.43□□□□□ -1.54
CHL1YPL008W BCH2P36122 765 aa5.42□□□□□ -1.54
CHL1YPL008W KIN1P13185 1064 aa5.41□□□□□ -1.54
CHL1YPL008W SPB4P25808 606 aaPredicted RBP5.41□□□□□ -1.54
CHL1YPL008W GUA1P38625 525 aaKnown RBP5.4□□□□□ -1.54
CHL1YPL008W NUP42P49686 430 aaKnown RBP5.4□□□□□ -1.54
CHL1YPL008W FAP1P53971 965 aa5.39□□□□□ -1.55
CHL1YPL008W DRS2P39524 1355 aa5.39□□□□□ -1.55
CHL1YPL008W YOR093CQ12275 1648 aa5.39□□□□□ -1.55
CHL1YPL008W NOP8Q08287 484 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms