RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C JIP4Q03361 876 aa9.35□□□□□ -0.91
SNF8YPL002C GRE2Q12068 342 aaKnown RBP9.34□□□□□ -0.91
SNF8YPL002C COQ8P27697 501 aa9.33□□□□□ -0.92
SNF8YPL002C PTC3P34221 468 aaKnown RBP9.33□□□□□ -0.92
SNF8YPL002C YEL023CP39992 682 aa9.32□□□□□ -0.92
SNF8YPL002C PTC4P38089 393 aa9.29□□□□□ -0.92
SNF8YPL002C ATH1P48016 1211 aa9.28□□□□□ -0.92
SNF8YPL002C TFG1P41895 735 aaPredicted RBP9.27□□□□□ -0.93
SNF8YPL002C GUT1P32190 709 aa9.26□□□□□ -0.93
SNF8YPL002C SAP30P38429 201 aa9.25□□□□□ -0.93
SNF8YPL002C YDL129WQ07555 291 aa9.23□□□□□ -0.93
SNF8YPL002C NST1P53935 1240 aa9.2□□□□□ -0.94
SNF8YPL002C SOL3P38858 249 aa9.18□□□□□ -0.94
SNF8YPL002C PML39Q03760 334 aa9.14□□□□□ -0.95
SNF8YPL002C NOP53Q12080 455 aaKnown RBP9.13□□□□□ -0.95
SNF8YPL002C YDR344CQ05510 147 aa9.11□□□□□ -0.95
SNF8YPL002C ILV3P39522 585 aaKnown RBP9.09□□□□□ -0.95
SNF8YPL002C MPH3P0CE00 602 aa9.08□□□□□ -0.96
SNF8YPL002C CHL1P22516 861 aaPredicted RBP9.07□□□□□ -0.96
SNF8YPL002C PRE3P38624 215 aa9.07□□□□□ -0.96
SNF8YPL002C AI4P03878 556 aa9.06□□□□□ -0.96
SNF8YPL002C MID1P41821 548 aa9.06□□□□□ -0.96
SNF8YPL002C YGR273CP53329 174 aa9.06□□□□□ -0.96
SNF8YPL002C SET1P38827 1080 aaKnown RBP9.03□□□□□ -0.96
SNF8YPL002C ELP4Q02884 456 aaKnown RBP8.98□□□□□ -0.97
SNF8YPL002C BCK2P33306 851 aa8.97□□□□□ -0.97
SNF8YPL002C ARH1P48360 493 aa8.96□□□□□ -0.98
SNF8YPL002C PEX29Q03370 554 aa8.94□□□□□ -0.98
SNF8YPL002C INO80P53115 1489 aa8.92□□□□□ -0.98
SNF8YPL002C SLI15P38283 698 aa8.91□□□□□ -0.98
SNF8YPL002C KEX1P09620 729 aa8.9□□□□□ -0.98
SNF8YPL002C MPC54Q08550 464 aa8.9□□□□□ -0.98
SNF8YPL002C VRP1P37370 817 aa8.87□□□□□ -0.99
SNF8YPL002C HAP5Q02516 242 aa8.86□□□□□ -0.99
SNF8YPL002C UBP14P38237 781 aaKnown RBP8.85□□□□□ -0.99
SNF8YPL002C YLR326WQ06170 240 aaKnown RBP8.85□□□□□ -0.99
SNF8YPL002C VHR2P40041 505 aa8.84□□□□□ -0.99
SNF8YPL002C SPT23P35210 1082 aa8.83□□□□□ -1
SNF8YPL002C MON2P48563 1636 aaPredicted RBP8.81□□□□□ -1
SNF8YPL002C BNI4P53858 892 aa8.8□□□□□ -1
SNF8YPL002C NMA111P53920 997 aa8.8□□□□□ -1
SNF8YPL002C DPL1Q05567 589 aa8.8□□□□□ -1
SNF8YPL002C XDJ1P39102 459 aa8.79□□□□□ -1
SNF8YPL002C PCS60P38137 543 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
SNF8YPL002C IFH1P39520 1085 aa8.77□□□□□ -1.01
SNF8YPL002C CDC73Q06697 393 aa8.77□□□□□ -1.01
SNF8YPL002C YPR148CQ06523 435 aa8.76□□□□□ -1.01
SNF8YPL002C RAD54P32863 898 aa8.74□□□□□ -1.01
SNF8YPL002C PTC2P39966 464 aaKnown RBP8.74□□□□□ -1.01
SNF8YPL002C YDR090CQ03193 310 aa8.73□□□□□ -1.01
SNF8YPL002C YML082WQ04533 649 aaKnown RBP8.72□□□□□ -1.01
SNF8YPL002C ISU2Q12056 156 aa8.71□□□□□ -1.02
SNF8YPL002C YPR015CQ12531 247 aa8.68□□□□□ -1.02
SNF8YPL002C REF2P42073 533 aaPredicted RBP8.67□□□□□ -1.02
SNF8YPL002C VPS70P47161 811 aa8.67□□□□□ -1.02
SNF8YPL002C RAM1P22007 431 aa8.66□□□□□ -1.02
SNF8YPL002C PDR1P12383 1068 aa8.62□□□□□ -1.03
SNF8YPL002C KIC1P38692 1080 aa8.62□□□□□ -1.03
SNF8YPL002C DPS1P04802 557 aaKnown RBP8.6□□□□□ -1.03
SNF8YPL002C RPP1BP10622 106 aaKnown RBP8.58□□□□□ -1.04
SNF8YPL002C GAP1P19145 602 aaPredicted RBP8.56□□□□□ -1.04
SNF8YPL002C DMA1P38823 416 aa8.54□□□□□ -1.04
SNF8YPL002C COX6P00427 148 aa8.53□□□□□ -1.04
SNF8YPL002C ORC6P38826 435 aa8.53□□□□□ -1.04
SNF8YPL002C YRR1Q12172 810 aa8.52□□□□□ -1.05
SNF8YPL002C MAK21Q12176 1025 aaKnown RBP8.52□□□□□ -1.05
SNF8YPL002C PEX21P50091 288 aa8.5□□□□□ -1.05
SNF8YPL002C CSC1Q06538 782 aa8.5□□□□□ -1.05
SNF8YPL002C TFB4Q12004 338 aa8.49□□□□□ -1.05
SNF8YPL002C GYP1Q08484 637 aa8.48□□□□□ -1.05
SNF8YPL002C TUM1Q08686 304 aaKnown RBP8.47□□□□□ -1.05
SNF8YPL002C STR2P47164 639 aa8.45□□□□□ -1.06
SNF8YPL002C RAS1P01119 309 aa8.44□□□□□ -1.06
SNF8YPL002C SDH2P21801 266 aa8.44□□□□□ -1.06
SNF8YPL002C CKB1P43639 278 aa8.44□□□□□ -1.06
SNF8YPL002C BUD20Q08004 166 aaPredicted RBP8.44□□□□□ -1.06
SNF8YPL002C DNA2P38859 1522 aa8.44□□□□□ -1.06
SNF8YPL002C PBS2P08018 668 aa8.43□□□□□ -1.06
SNF8YPL002C MVP1P40959 511 aaKnown RBP8.43□□□□□ -1.06
SNF8YPL002C ISM1P48526 1002 aa8.43□□□□□ -1.06
SNF8YPL002C SRC1Q03707 834 aa8.43□□□□□ -1.06
SNF8YPL002C NUD1P32336 851 aa8.42□□□□□ -1.06
SNF8YPL002C SAS10Q12136 610 aaPredicted RBP8.42□□□□□ -1.06
SNF8YPL002C SAS4Q04003 481 aa8.41□□□□□ -1.06
SNF8YPL002C RGR1P19263 1082 aa8.39□□□□□ -1.07
SNF8YPL002C PRT1P06103 763 aaKnown RBP8.37□□□□□ -1.07
SNF8YPL002C YPR109WQ06104 294 aa8.37□□□□□ -1.07
SNF8YPL002C AMS1P22855 1083 aa8.36□□□□□ -1.07
SNF8YPL002C TY1A-DR4O74302 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-HP0C2I4 478 aaKnown RBP8.34□□□□□ -1.07
SNF8YPL002C TY1A-AP0CX57 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-PR1P0CX58 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-ORP0CX59 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-PR2P0CX60 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-DR5P0CX65 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-ER2P0CX66 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-GR3P0CX67 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-LR1P0CX68 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-MR2P0CX69 440 aa8.34□□□□□ -1.07
SNF8YPL002C TY1A-JR2P47099 440 aa8.34□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms