RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W NUP159P40477 1460 aa10.84□□□□□ -0.67
LSC1YOR142W LTE1P07866 1435 aa10.83□□□□□ -0.68
LSC1YOR142W BNI1P41832 1953 aa10.82□□□□□ -0.68
LSC1YOR142W YTA7P40340 1379 aa10.8□□□□□ -0.68
LSC1YOR142W SNQ2P32568 1501 aaKnown RBP10.79□□□□□ -0.68
LSC1YOR142W VPS15P22219 1454 aa10.75□□□□□ -0.69
LSC1YOR142W GEA2P39993 1459 aaKnown RBP10.74□□□□□ -0.69
LSC1YOR142W MLP2P40457 1679 aa10.74□□□□□ -0.69
LSC1YOR142W ULS1Q08562 1619 aa10.7□□□□□ -0.7
LSC1YOR142W SNT2P53127 1403 aa10.69□□□□□ -0.7
LSC1YOR142W SPO14P36126 1683 aa10.66□□□□□ -0.7
LSC1YOR142W ITT1Q04638 464 aa10.63□□□□□ -0.71
LSC1YOR142W PDR15Q04182 1529 aaKnown RBP10.63□□□□□ -0.71
LSC1YOR142W STH1P32597 1359 aa10.62□□□□□ -0.71
LSC1YOR142W IRC20Q06554 1556 aa10.58□□□□□ -0.72
LSC1YOR142W NUP170P38181 1502 aa10.58□□□□□ -0.72
LSC1YOR142W PDR12Q02785 1511 aa10.58□□□□□ -0.72
LSC1YOR142W DRS2P39524 1355 aa10.57□□□□□ -0.72
LSC1YOR142W GDB1Q06625 1536 aa10.55□□□□□ -0.72
LSC1YOR142W MMS1Q06211 1407 aa10.53□□□□□ -0.72
LSC1YOR142W SAS10Q12136 610 aaPredicted RBP10.52□□□□□ -0.73
LSC1YOR142W DOP1Q03921 1698 aa10.52□□□□□ -0.73
LSC1YOR142W MET10P39692 1035 aa10.5□□□□□ -0.73
LSC1YOR142W DNF2Q12675 1612 aa10.5□□□□□ -0.73
LSC1YOR142W RTT106P40161 455 aa10.48□□□□□ -0.73
LSC1YOR142W YBT1P32386 1661 aa10.47□□□□□ -0.73
LSC1YOR142W TY3B-GQ99315 1547 aa10.45□□□□□ -0.74
LSC1YOR142W PDR10P51533 1564 aa10.44□□□□□ -0.74
LSC1YOR142W IQG1Q12280 1495 aa10.43□□□□□ -0.74
LSC1YOR142W NUP157P40064 1391 aaKnown RBP10.43□□□□□ -0.74
LSC1YOR142W CHC1P22137 1653 aaKnown RBP10.39□□□□□ -0.75
LSC1YOR142W GEA1P47102 1408 aaPredicted RBP10.39□□□□□ -0.75
LSC1YOR142W BUD3P25558 1636 aa10.37□□□□□ -0.75
LSC1YOR142W TRM3Q07527 1436 aa10.36□□□□□ -0.75
LSC1YOR142W MIF2P35201 549 aa10.36□□□□□ -0.75
LSC1YOR142W IFH1P39520 1085 aa10.36□□□□□ -0.75
LSC1YOR142W TAF7Q05021 590 aa10.36□□□□□ -0.75
LSC1YOR142W ARO1P08566 1588 aaKnown RBP10.35□□□□□ -0.75
LSC1YOR142W ABP1P15891 592 aaKnown RBP10.35□□□□□ -0.75
LSC1YOR142W CAT8P39113 1433 aa10.31□□□□□ -0.76
LSC1YOR142W SEC7P11075 2009 aaKnown RBP10.29□□□□□ -0.76
LSC1YOR142W YOR093CQ12275 1648 aa10.25□□□□□ -0.77
LSC1YOR142W FAP1P53971 965 aa10.25□□□□□ -0.77
LSC1YOR142W YSP2Q06681 1438 aa10.22□□□□□ -0.77
LSC1YOR142W DNF3Q12674 1656 aa10.16□□□□□ -0.78
LSC1YOR142W CKB1P43639 278 aa10.15□□□□□ -0.78
LSC1YOR142W BNR1P40450 1375 aa10.13□□□□□ -0.79
LSC1YOR142W SRB8P25648 1427 aa10.09□□□□□ -0.79
LSC1YOR142W YFR006WP43590 535 aa10.06□□□□□ -0.8
LSC1YOR142W NUP188P52593 1655 aaKnown RBP10.01□□□□□ -0.81
LSC1YOR142W VMR1P38735 1592 aa10□□□□□ -0.81
LSC1YOR142W USO1P25386 1790 aa9.98□□□□□ -0.81
LSC1YOR142W YAP3P38749 330 aa9.97□□□□□ -0.81
LSC1YOR142W IKI3Q06706 1349 aaKnown RBP9.97□□□□□ -0.81
LSC1YOR142W IML1P47170 1584 aa9.96□□□□□ -0.82
LSC1YOR142W SSM4P40318 1319 aa9.92□□□□□ -0.82
LSC1YOR142W BUD21Q08492 214 aaPredicted RBP9.92□□□□□ -0.82
LSC1YOR142W GCN2P15442 1659 aa9.89□□□□□ -0.83
LSC1YOR142W PDR5P33302 1511 aaKnown RBP9.87□□□□□ -0.83
LSC1YOR142W MAK10Q02197 733 aa9.85□□□□□ -0.83
LSC1YOR142W HAP1P0CE41 1502 aa9.85□□□□□ -0.83
LSC1YOR142W IPL1P38991 367 aa9.84□□□□□ -0.83
LSC1YOR142W URN1Q06525 465 aaKnown RBP9.84□□□□□ -0.83
LSC1YOR142W TYS1P36421 394 aaKnown RBP9.83□□□□□ -0.84
LSC1YOR142W PDR11P40550 1411 aa9.79□□□□□ -0.84
LSC1YOR142W TY1B-NL2Q99337 1749 aaKnown RBP9.79□□□□□ -0.84
LSC1YOR142W NUP192P47054 1683 aa9.67□□□□□ -0.86
LSC1YOR142W DIP2Q12220 943 aaPredicted RBP9.66□□□□□ -0.86
LSC1YOR142W THI12P42883 340 aa9.63□□□□□ -0.87
LSC1YOR142W THI5P43534 340 aa9.63□□□□□ -0.87
LSC1YOR142W THI11P47183 340 aa9.63□□□□□ -0.87
LSC1YOR142W THI13Q07748 340 aa9.63□□□□□ -0.87
LSC1YOR142W RAV1P47104 1357 aa9.61□□□□□ -0.87
LSC1YOR142W PRY3P47033 881 aa9.6□□□□□ -0.87
LSC1YOR142W KRE5P22023 1365 aa9.6□□□□□ -0.87
LSC1YOR142W BCK1Q01389 1478 aa9.59□□□□□ -0.87
LSC1YOR142W YMR196WQ04336 1088 aa9.59□□□□□ -0.87
LSC1YOR142W CFT1Q06632 1357 aaKnown RBP9.58□□□□□ -0.88
LSC1YOR142W PRI1P10363 409 aa9.55□□□□□ -0.88
LSC1YOR142W RTC1Q08281 1341 aa9.53□□□□□ -0.88
LSC1YOR142W PAF1P38351 445 aa9.52□□□□□ -0.89
LSC1YOR142W BFR2Q06631 534 aaKnown RBP9.52□□□□□ -0.89
LSC1YOR142W RAD9P14737 1309 aa9.52□□□□□ -0.89
LSC1YOR142W RIA1P53893 1110 aa9.51□□□□□ -0.89
LSC1YOR142W MRX12P47084 519 aa9.48□□□□□ -0.89
LSC1YOR142W AAD16Q02895 342 aa9.48□□□□□ -0.89
LSC1YOR142W YNR029CP53729 429 aaKnown RBP9.47□□□□□ -0.89
LSC1YOR142W CAB1Q04430 367 aa9.47□□□□□ -0.89
LSC1YOR142W NOP7P53261 605 aaKnown RBP9.46□□□□□ -0.9
LSC1YOR142W ALD4P46367 519 aaKnown RBP9.45□□□□□ -0.9
LSC1YOR142W ISW2Q08773 1120 aa9.45□□□□□ -0.9
LSC1YOR142W TY3B-IQ7LHG5 1498 aaKnown RBP9.45□□□□□ -0.9
LSC1YOR142W RPG1P38249 964 aaKnown RBP9.44□□□□□ -0.9
LSC1YOR142W TY4B-HP0C2J7 1802 aa9.41□□□□□ -0.9
LSC1YOR142W TY4B-JP47024 1803 aa9.41□□□□□ -0.9
LSC1YOR142W AVT3P36062 692 aa9.41□□□□□ -0.9
LSC1YOR142W PTP3P40048 928 aa9.38□□□□□ -0.91
LSC1YOR142W RRP5Q05022 1729 aaKnown RBP9.38□□□□□ -0.91
LSC1YOR142W TAF5P38129 798 aa9.36□□□□□ -0.91
LSC1YOR142W YRF1-2P40105 1681 aa9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms