RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeastyeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI7YOR076C YMR1P47147 688 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SKI7YOR076C PML39Q03760 334 aa2.88□□□□□ -1.95
SKI7YOR076C STS1P38637 319 aa2.87□□□□□ -1.95
SKI7YOR076C VPS29P38759 282 aa2.87□□□□□ -1.95
SKI7YOR076C GYP5Q12344 894 aa2.87□□□□□ -1.95
SKI7YOR076C MRM1P25270 412 aa2.86□□□□□ -1.95
SKI7YOR076C SPT23P35210 1082 aa2.85□□□□□ -1.95
SKI7YOR076C DCW1P36091 449 aa2.85□□□□□ -1.95
SKI7YOR076C PSD2P53037 1138 aaKnown RBP2.85□□□□□ -1.95
SKI7YOR076C YML082WQ04533 649 aaKnown RBP2.82□□□□□ -1.96
SKI7YOR076C MID1P41821 548 aa2.8□□□□□ -1.96
SKI7YOR076C BNI4P53858 892 aa2.78□□□□□ -1.96
SKI7YOR076C AMS1P22855 1083 aa2.77□□□□□ -1.97
SKI7YOR076C YAH1Q12184 172 aaKnown RBP2.77□□□□□ -1.97
SKI7YOR076C HAP5Q02516 242 aa2.76□□□□□ -1.97
SKI7YOR076C GAR1P28007 205 aaKnown RBP2.75□□□□□ -1.97
SKI7YOR076C PTC2P39966 464 aaKnown RBP2.75□□□□□ -1.97
SKI7YOR076C YLR271WQ06152 274 aa2.73□□□□□ -1.97
SKI7YOR076C SDH2P21801 266 aa2.72□□□□□ -1.97
SKI7YOR076C NST1P53935 1240 aa2.72□□□□□ -1.97
SKI7YOR076C YPR015CQ12531 247 aa2.72□□□□□ -1.97
SKI7YOR076C PEX29Q03370 554 aa2.71□□□□□ -1.98
SKI7YOR076C GBP2P25555 427 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SKI7YOR076C RTG3P38165 486 aa2.7□□□□□ -1.98
SKI7YOR076C BRE2P43132 505 aa2.69□□□□□ -1.98
SKI7YOR076C MTC5Q03897 1148 aa2.67□□□□□ -1.98
SKI7YOR076C RAM1P22007 431 aa2.66□□□□□ -1.98
SKI7YOR076C RCR1P38212 213 aa2.65□□□□□ -1.99
SKI7YOR076C MPC54Q08550 464 aa2.64□□□□□ -1.99
SKI7YOR076C GRE2Q12068 342 aaKnown RBP2.64□□□□□ -1.99
SKI7YOR076C ILV3P39522 585 aaKnown RBP2.63□□□□□ -1.99
SKI7YOR076C YDL176WQ12027 708 aa2.62□□□□□ -1.99
SKI7YOR076C MET22P32179 357 aa2.62□□□□□ -1.99
SKI7YOR076C SOL3P38858 249 aa2.62□□□□□ -1.99
SKI7YOR076C MPH3P0CE00 602 aa2.61□□□□□ -1.99
SKI7YOR076C AIR1P40507 360 aaKnown RBP2.61□□□□□ -1.99
SKI7YOR076C NMA111P53920 997 aa2.61□□□□□ -1.99
SKI7YOR076C GCR2Q01722 534 aa2.61□□□□□ -1.99
SKI7YOR076C AI4P03878 556 aa2.6□□□□□ -1.99
SKI7YOR076C ENV9Q08651 330 aa2.6□□□□□ -1.99
SKI7YOR076C GYP1Q08484 637 aa2.6□□□□□ -1.99
SKI7YOR076C GUT1P32190 709 aa2.58□□□□□ -2
SKI7YOR076C CST9Q06032 482 aa2.58□□□□□ -2
SKI7YOR076C YEL077CQ3E7X8 1277 aa2.58□□□□□ -2
SKI7YOR076C CLA4P48562 842 aa2.57□□□□□ -2
SKI7YOR076C SAS4Q04003 481 aa2.56□□□□□ -2
SKI7YOR076C ATH1P48016 1211 aa2.56□□□□□ -2
SKI7YOR076C YDR444WQ04093 687 aa2.53□□□□□ -2
SKI7YOR076C DPL1Q05567 589 aa2.52□□□□□ -2.01
SKI7YOR076C PTC3P34221 468 aaKnown RBP2.52□□□□□ -2.01
SKI7YOR076C EDS1P38073 919 aa2.5□□□□□ -2.01
SKI7YOR076C LCB5Q06147 687 aaKnown RBP2.5□□□□□ -2.01
SKI7YOR076C SLI15P38283 698 aa2.49□□□□□ -2.01
SKI7YOR076C CST6P40535 587 aa2.49□□□□□ -2.01
SKI7YOR076C PDR1P12383 1068 aa2.48□□□□□ -2.01
SKI7YOR076C BFR2Q06631 534 aaKnown RBP2.48□□□□□ -2.01
SKI7YOR076C MRF1P30775 413 aaPredicted RBP2.48□□□□□ -2.01
SKI7YOR076C ISU2Q12056 156 aa2.48□□□□□ -2.01
SKI7YOR076C CDC4P07834 779 aa2.46□□□□□ -2.01
SKI7YOR076C NRD1P53617 575 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SKI7YOR076C MIF2P35201 549 aa2.45□□□□□ -2.02
SKI7YOR076C LAM6Q08001 693 aa2.45□□□□□ -2.02
SKI7YOR076C MGA2P40578 1113 aa2.44□□□□□ -2.02
SKI7YOR076C YGR273CP53329 174 aa2.43□□□□□ -2.02
SKI7YOR076C TRK2P28584 889 aa2.42□□□□□ -2.02
SKI7YOR076C BUD20Q08004 166 aaPredicted RBP2.41□□□□□ -2.02
SKI7YOR076C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SKI7YOR076C ERG12P07277 443 aa2.41□□□□□ -2.02
SKI7YOR076C LSB3P43603 459 aaKnown RBP2.41□□□□□ -2.02
SKI7YOR076C CDC73Q06697 393 aa2.4□□□□□ -2.03
SKI7YOR076C RRD1P40454 393 aaKnown RBP2.39□□□□□ -2.03
SKI7YOR076C PRT1P06103 763 aaKnown RBP2.38□□□□□ -2.03
SKI7YOR076C ACO2P39533 789 aa2.37□□□□□ -2.03
SKI7YOR076C MAK11P20484 414 aaKnown RBP2.37□□□□□ -2.03
SKI7YOR076C CAF120P53836 1060 aa2.37□□□□□ -2.03
SKI7YOR076C SSP1P38871 571 aa2.36□□□□□ -2.03
SKI7YOR076C ICP55P40051 511 aa2.35□□□□□ -2.03
SKI7YOR076C FRK1Q03002 865 aaPredicted RBP2.35□□□□□ -2.03
SKI7YOR076C STR2P47164 639 aa2.34□□□□□ -2.03
SKI7YOR076C YGR035CP53222 116 aa2.34□□□□□ -2.03
SKI7YOR076C HED1Q03937 162 aa2.34□□□□□ -2.03
SKI7YOR076C COQ8P27697 501 aa2.33□□□□□ -2.04
SKI7YOR076C ASH1P34233 588 aa2.33□□□□□ -2.04
SKI7YOR076C BDP1P46678 594 aa2.33□□□□□ -2.04
SKI7YOR076C HPF1Q05164 967 aa2.33□□□□□ -2.04
SKI7YOR076C MET32Q12041 191 aa2.33□□□□□ -2.04
SKI7YOR076C PUS1Q12211 544 aaKnown RBP2.33□□□□□ -2.04
SKI7YOR076C AFT1P22149 690 aa2.32□□□□□ -2.04
SKI7YOR076C ISM1P48526 1002 aa2.32□□□□□ -2.04
SKI7YOR076C KEX1P09620 729 aa2.3□□□□□ -2.04
SKI7YOR076C TY1A-DR4O74302 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-HP0C2I4 478 aaKnown RBP2.29□□□□□ -2.04
SKI7YOR076C TY1A-AP0CX57 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-PR1P0CX58 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-ORP0CX59 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-PR2P0CX60 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-DR5P0CX65 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-ER2P0CX66 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-GR3P0CX67 440 aa2.29□□□□□ -2.04
SKI7YOR076C TY1A-LR1P0CX68 440 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms