RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C DAN4P47179 1161 aa7.77□□□□□ -1.17
ATG3YNR007C GRE2Q12068 342 aaKnown RBP7.77□□□□□ -1.17
ATG3YNR007C PTC4P38089 393 aa7.75□□□□□ -1.17
ATG3YNR007C YEL023CP39992 682 aa7.75□□□□□ -1.17
ATG3YNR007C COQ8P27697 501 aa7.74□□□□□ -1.17
ATG3YNR007C PTC3P34221 468 aaKnown RBP7.74□□□□□ -1.17
ATG3YNR007C EDS1P38073 919 aa7.74□□□□□ -1.17
ATG3YNR007C ATH1P48016 1211 aa7.73□□□□□ -1.17
ATG3YNR007C GUT1P32190 709 aa7.72□□□□□ -1.17
ATG3YNR007C YDL129WQ07555 291 aa7.69□□□□□ -1.18
ATG3YNR007C SAP30P38429 201 aa7.67□□□□□ -1.18
ATG3YNR007C NOP53Q12080 455 aaKnown RBP7.67□□□□□ -1.18
ATG3YNR007C NST1P53935 1240 aa7.6□□□□□ -1.19
ATG3YNR007C PML39Q03760 334 aa7.59□□□□□ -1.19
ATG3YNR007C SOL3P38858 249 aa7.58□□□□□ -1.2
ATG3YNR007C CHL1P22516 861 aaPredicted RBP7.57□□□□□ -1.2
ATG3YNR007C PRE3P38624 215 aa7.56□□□□□ -1.2
ATG3YNR007C AI4P03878 556 aa7.55□□□□□ -1.2
ATG3YNR007C MPH3P0CE00 602 aa7.55□□□□□ -1.2
ATG3YNR007C SET1P38827 1080 aaKnown RBP7.52□□□□□ -1.21
ATG3YNR007C YGR273CP53329 174 aa7.52□□□□□ -1.21
ATG3YNR007C BCK2P33306 851 aa7.49□□□□□ -1.21
ATG3YNR007C MID1P41821 548 aa7.49□□□□□ -1.21
ATG3YNR007C ELP4Q02884 456 aaKnown RBP7.48□□□□□ -1.21
ATG3YNR007C ILV3P39522 585 aaKnown RBP7.47□□□□□ -1.21
ATG3YNR007C ARH1P48360 493 aa7.46□□□□□ -1.22
ATG3YNR007C YDR344CQ05510 147 aa7.46□□□□□ -1.22
ATG3YNR007C PEX29Q03370 554 aa7.45□□□□□ -1.22
ATG3YNR007C SLI15P38283 698 aa7.39□□□□□ -1.23
ATG3YNR007C KEX1P09620 729 aa7.38□□□□□ -1.23
ATG3YNR007C SPT23P35210 1082 aa7.38□□□□□ -1.23
ATG3YNR007C VRP1P37370 817 aa7.38□□□□□ -1.23
ATG3YNR007C IFH1P39520 1085 aa7.38□□□□□ -1.23
ATG3YNR007C HAP5Q02516 242 aa7.38□□□□□ -1.23
ATG3YNR007C MPC54Q08550 464 aa7.38□□□□□ -1.23
ATG3YNR007C UBP14P38237 781 aaKnown RBP7.34□□□□□ -1.23
ATG3YNR007C XDJ1P39102 459 aa7.34□□□□□ -1.23
ATG3YNR007C BNI4P53858 892 aa7.34□□□□□ -1.23
ATG3YNR007C NMA111P53920 997 aa7.33□□□□□ -1.24
ATG3YNR007C DPL1Q05567 589 aa7.33□□□□□ -1.24
ATG3YNR007C YLR326WQ06170 240 aaKnown RBP7.33□□□□□ -1.24
ATG3YNR007C VHR2P40041 505 aa7.31□□□□□ -1.24
ATG3YNR007C PTC2P39966 464 aaKnown RBP7.3□□□□□ -1.24
ATG3YNR007C YPR148CQ06523 435 aa7.29□□□□□ -1.24
ATG3YNR007C YML082WQ04533 649 aaKnown RBP7.28□□□□□ -1.24
ATG3YNR007C RAD54P32863 898 aa7.27□□□□□ -1.25
ATG3YNR007C PCS60P38137 543 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
ATG3YNR007C ISU2Q12056 156 aa7.27□□□□□ -1.25
ATG3YNR007C CDC73Q06697 393 aa7.25□□□□□ -1.25
ATG3YNR007C RPP1BP10622 106 aaKnown RBP7.23□□□□□ -1.25
ATG3YNR007C REF2P42073 533 aaPredicted RBP7.23□□□□□ -1.25
ATG3YNR007C YDR090CQ03193 310 aa7.22□□□□□ -1.25
ATG3YNR007C KIC1P38692 1080 aa7.21□□□□□ -1.26
ATG3YNR007C VPS70P47161 811 aa7.2□□□□□ -1.26
ATG3YNR007C DPS1P04802 557 aaKnown RBP7.16□□□□□ -1.26
ATG3YNR007C RAM1P22007 431 aa7.16□□□□□ -1.26
ATG3YNR007C YPR015CQ12531 247 aa7.15□□□□□ -1.26
ATG3YNR007C MAK21Q12176 1025 aaKnown RBP7.14□□□□□ -1.27
ATG3YNR007C COX6P00427 148 aa7.12□□□□□ -1.27
ATG3YNR007C PDR1P12383 1068 aa7.12□□□□□ -1.27
ATG3YNR007C GAP1P19145 602 aaPredicted RBP7.11□□□□□ -1.27
ATG3YNR007C PEX21P50091 288 aa7.11□□□□□ -1.27
ATG3YNR007C CSC1Q06538 782 aa7.11□□□□□ -1.27
ATG3YNR007C CKB1P43639 278 aa7.09□□□□□ -1.27
ATG3YNR007C TFB4Q12004 338 aa7.09□□□□□ -1.27
ATG3YNR007C GYP1Q08484 637 aa7.08□□□□□ -1.28
ATG3YNR007C DMA1P38823 416 aa7.07□□□□□ -1.28
ATG3YNR007C YRR1Q12172 810 aa7.07□□□□□ -1.28
ATG3YNR007C ORC6P38826 435 aa7.06□□□□□ -1.28
ATG3YNR007C SAS4Q04003 481 aa7.06□□□□□ -1.28
ATG3YNR007C TUM1Q08686 304 aaKnown RBP7.04□□□□□ -1.28
ATG3YNR007C PBS2P08018 668 aa7.03□□□□□ -1.28
ATG3YNR007C MVP1P40959 511 aaKnown RBP7.01□□□□□ -1.29
ATG3YNR007C SAS10Q12136 610 aaPredicted RBP7.01□□□□□ -1.29
ATG3YNR007C BUD20Q08004 166 aaPredicted RBP7□□□□□ -1.29
ATG3YNR007C NUD1P32336 851 aa6.99□□□□□ -1.29
ATG3YNR007C STR2P47164 639 aa6.99□□□□□ -1.29
ATG3YNR007C PRT1P06103 763 aaKnown RBP6.98□□□□□ -1.29
ATG3YNR007C RGR1P19263 1082 aa6.98□□□□□ -1.29
ATG3YNR007C RAS1P01119 309 aa6.97□□□□□ -1.29
ATG3YNR007C AMS1P22855 1083 aa6.97□□□□□ -1.29
ATG3YNR007C MRF1P30775 413 aaPredicted RBP6.97□□□□□ -1.29
ATG3YNR007C NPL4P33755 580 aa6.97□□□□□ -1.29
ATG3YNR007C ISM1P48526 1002 aa6.97□□□□□ -1.29
ATG3YNR007C YPR109WQ06104 294 aa6.96□□□□□ -1.3
ATG3YNR007C SDH2P21801 266 aa6.95□□□□□ -1.3
ATG3YNR007C SRC1Q03707 834 aa6.95□□□□□ -1.3
ATG3YNR007C YEL077CQ3E7X8 1277 aa6.94□□□□□ -1.3
ATG3YNR007C DSF2P38213 736 aa6.93□□□□□ -1.3
ATG3YNR007C MAM3Q12296 706 aa6.93□□□□□ -1.3
ATG3YNR007C PSE1P32337 1089 aaKnown RBP6.92□□□□□ -1.3
ATG3YNR007C GCD11P32481 527 aaKnown RBP6.91□□□□□ -1.3
ATG3YNR007C TY1A-DR4O74302 440 aa6.88□□□□□ -1.31
ATG3YNR007C ERG12P07277 443 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-HP0C2I4 478 aaKnown RBP6.88□□□□□ -1.31
ATG3YNR007C TY1A-AP0CX57 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-PR1P0CX58 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-ORP0CX59 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-PR2P0CX60 440 aa6.88□□□□□ -1.31
ATG3YNR007C TY1A-DR5P0CX65 440 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms