RNA–Protein interactions for RNA: YNL187W

SWT21, Transcript of Protein involved in mRNA splicing, yeastyeast

Gene SWT21, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT21YNL187W TRM732Q03496 1420 aa12.8□□□□□ -0.36
SWT21YNL187W PDR15Q04182 1529 aaKnown RBP12.8□□□□□ -0.36
SWT21YNL187W ULS1Q08562 1619 aa12.8□□□□□ -0.36
SWT21YNL187W NTE1Q04958 1679 aa12.76□□□□□ -0.37
SWT21YNL187W TAF7Q05021 590 aa12.74□□□□□ -0.37
SWT21YNL187W IFH1P39520 1085 aa12.71□□□□□ -0.37
SWT21YNL187W RPO21P04050 1733 aaKnown RBP12.71□□□□□ -0.38
SWT21YNL187W SNT2P53127 1403 aa12.7□□□□□ -0.38
SWT21YNL187W GEA1P47102 1408 aaPredicted RBP12.65□□□□□ -0.38
SWT21YNL187W NUP159P40477 1460 aa12.65□□□□□ -0.38
SWT21YNL187W RTT106P40161 455 aa12.58□□□□□ -0.4
SWT21YNL187W GEA2P39993 1459 aaKnown RBP12.58□□□□□ -0.4
SWT21YNL187W MET5P47169 1442 aa12.57□□□□□ -0.4
SWT21YNL187W TY3B-GQ99315 1547 aa12.57□□□□□ -0.4
SWT21YNL187W YRF1-1P0CX20 1796 aa12.56□□□□□ -0.4
SWT21YNL187W YRF1-5P0CX21 1796 aa12.56□□□□□ -0.4
SWT21YNL187W YRF1-8P0CX22 1796 aa12.56□□□□□ -0.4
SWT21YNL187W IRC20Q06554 1556 aa12.56□□□□□ -0.4
SWT21YNL187W PRI1P10363 409 aa12.51□□□□□ -0.41
SWT21YNL187W YBT1P32386 1661 aa12.51□□□□□ -0.41
SWT21YNL187W AAD16Q02895 342 aa12.5□□□□□ -0.41
SWT21YNL187W VPS15P22219 1454 aa12.5□□□□□ -0.41
SWT21YNL187W IKI3Q06706 1349 aaKnown RBP12.49□□□□□ -0.41
SWT21YNL187W SPO14P36126 1683 aa12.48□□□□□ -0.41
SWT21YNL187W NUP170P38181 1502 aa12.44□□□□□ -0.42
SWT21YNL187W PDR12Q02785 1511 aa12.42□□□□□ -0.42
SWT21YNL187W GDB1Q06625 1536 aa12.42□□□□□ -0.42
SWT21YNL187W CAT8P39113 1433 aa12.41□□□□□ -0.42
SWT21YNL187W MET10P39692 1035 aa12.41□□□□□ -0.42
SWT21YNL187W SSM4P40318 1319 aa12.4□□□□□ -0.42
SWT21YNL187W NUP157P40064 1391 aaKnown RBP12.39□□□□□ -0.43
SWT21YNL187W PDR10P51533 1564 aa12.39□□□□□ -0.43
SWT21YNL187W ARO1P08566 1588 aaKnown RBP12.36□□□□□ -0.43
SWT21YNL187W LTE1P07866 1435 aa12.31□□□□□ -0.44
SWT21YNL187W BUD3P25558 1636 aa12.3□□□□□ -0.44
SWT21YNL187W YCK3P39962 524 aa12.3□□□□□ -0.44
SWT21YNL187W CKB1P43639 278 aa12.3□□□□□ -0.44
SWT21YNL187W IQG1Q12280 1495 aa12.26□□□□□ -0.45
SWT21YNL187W SRB8P25648 1427 aa12.24□□□□□ -0.45
SWT21YNL187W YSP2Q06681 1438 aa12.19□□□□□ -0.46
SWT21YNL187W DRS2P39524 1355 aa12.17□□□□□ -0.46
SWT21YNL187W DOP1Q03921 1698 aa12.13□□□□□ -0.47
SWT21YNL187W BNI1P41832 1953 aa12.12□□□□□ -0.47
SWT21YNL187W ITT1Q04638 464 aa12.09□□□□□ -0.47
SWT21YNL187W BUD21Q08492 214 aaPredicted RBP12.09□□□□□ -0.47
SWT21YNL187W CHC1P22137 1653 aaKnown RBP12.08□□□□□ -0.48
SWT21YNL187W MMS1Q06211 1407 aa12.08□□□□□ -0.48
SWT21YNL187W TRM3Q07527 1436 aa12.08□□□□□ -0.48
SWT21YNL187W BNR1P40450 1375 aa12.07□□□□□ -0.48
SWT21YNL187W SEC7P11075 2009 aaKnown RBP12.07□□□□□ -0.48
SWT21YNL187W HAA1Q12753 694 aaKnown RBP12.05□□□□□ -0.48
SWT21YNL187W GCN2P15442 1659 aa12.04□□□□□ -0.48
SWT21YNL187W ISW2Q08773 1120 aa12□□□□□ -0.49
SWT21YNL187W RPG1P38249 964 aaKnown RBP11.96□□□□□ -0.49
SWT21YNL187W YOR093CQ12275 1648 aa11.96□□□□□ -0.5
SWT21YNL187W VMR1P38735 1592 aa11.9□□□□□ -0.5
SWT21YNL187W DNF2Q12675 1612 aa11.89□□□□□ -0.51
SWT21YNL187W PDR5P33302 1511 aaKnown RBP11.88□□□□□ -0.51
SWT21YNL187W NUP188P52593 1655 aaKnown RBP11.87□□□□□ -0.51
SWT21YNL187W NOP7P53261 605 aaKnown RBP11.84□□□□□ -0.51
SWT21YNL187W IML1P47170 1584 aa11.83□□□□□ -0.52
SWT21YNL187W TSR3Q12094 313 aaKnown RBP11.82□□□□□ -0.52
SWT21YNL187W PDR11P40550 1411 aa11.81□□□□□ -0.52
SWT21YNL187W PAF1P38351 445 aa11.8□□□□□ -0.52
SWT21YNL187W BFR2Q06631 534 aaKnown RBP11.75□□□□□ -0.53
SWT21YNL187W RAV1P47104 1357 aa11.73□□□□□ -0.53
SWT21YNL187W TYS1P36421 394 aaKnown RBP11.71□□□□□ -0.53
SWT21YNL187W URN1Q06525 465 aaKnown RBP11.69□□□□□ -0.54
SWT21YNL187W IPL1P38991 367 aa11.68□□□□□ -0.54
SWT21YNL187W POL5P39985 1022 aaKnown RBP11.68□□□□□ -0.54
SWT21YNL187W YAP3P38749 330 aa11.67□□□□□ -0.54
SWT21YNL187W DNF3Q12674 1656 aa11.67□□□□□ -0.54
SWT21YNL187W RTC1Q08281 1341 aa11.66□□□□□ -0.54
SWT21YNL187W ABP1P15891 592 aaKnown RBP11.65□□□□□ -0.54
SWT21YNL187W NUP192P47054 1683 aa11.65□□□□□ -0.55
SWT21YNL187W ORC1P54784 914 aaPredicted RBP11.62□□□□□ -0.55
SWT21YNL187W TAF5P38129 798 aa11.6□□□□□ -0.55
SWT21YNL187W TY3B-IQ7LHG5 1498 aaKnown RBP11.54□□□□□ -0.56
SWT21YNL187W ESL2P36168 1195 aa11.51□□□□□ -0.57
SWT21YNL187W RAD9P14737 1309 aa11.51□□□□□ -0.57
SWT21YNL187W HAP1P0CE41 1502 aa11.5□□□□□ -0.57
SWT21YNL187W KIP3P53086 805 aaKnown RBP11.49□□□□□ -0.57
SWT21YNL187W BCK1Q01389 1478 aa11.47□□□□□ -0.57
SWT21YNL187W YLR419WQ06698 1435 aaKnown RBP11.47□□□□□ -0.57
SWT21YNL187W CAB1Q04430 367 aa11.47□□□□□ -0.57
SWT21YNL187W MAK10Q02197 733 aa11.46□□□□□ -0.57
SWT21YNL187W KRE5P22023 1365 aa11.45□□□□□ -0.58
SWT21YNL187W ALD4P46367 519 aaKnown RBP11.45□□□□□ -0.58
SWT21YNL187W MHP1P43638 1398 aa11.44□□□□□ -0.58
SWT21YNL187W TAF8Q03750 510 aa11.43□□□□□ -0.58
SWT21YNL187W USO1P25386 1790 aa11.41□□□□□ -0.58
SWT21YNL187W SPE2P21182 396 aa11.41□□□□□ -0.58
SWT21YNL187W MRX12P47084 519 aa11.41□□□□□ -0.58
SWT21YNL187W SPT7P35177 1332 aa11.39□□□□□ -0.59
SWT21YNL187W RIA1P53893 1110 aa11.39□□□□□ -0.59
SWT21YNL187W DIP2Q12220 943 aaPredicted RBP11.37□□□□□ -0.59
SWT21YNL187W SEC3P33332 1336 aaKnown RBP11.35□□□□□ -0.59
SWT21YNL187W CFT1Q06632 1357 aaKnown RBP11.34□□□□□ -0.59
SWT21YNL187W LEU3P08638 886 aa11.34□□□□□ -0.59
SWT21YNL187W NAP1P25293 417 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms