RNA–Protein interactions for RNA: YNL147W

LSM7, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM7, Length 348 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM7	YNL147W	YAH1	Q12184	172 aa	Known RBP	5.26	□□□□□ -1.57
LSM7	YNL147W	ARH1	P48360	493 aa		5.25	□□□□□ -1.57
LSM7	YNL147W	YPL062W	Q02781	134 aa		5.24	□□□□□ -1.57
LSM7	YNL147W	YFR006W	P43590	535 aa		5.23	□□□□□ -1.57
LSM7	YNL147W	VPS29	P38759	282 aa		5.22	□□□□□ -1.57
LSM7	YNL147W	YDR344C	Q05510	147 aa		5.22	□□□□□ -1.57
LSM7	YNL147W	SPT23	P35210	1082 aa		5.21	□□□□□ -1.58
LSM7	YNL147W	DCW1	P36091	449 aa		5.21	□□□□□ -1.58
LSM7	YNL147W	PML39	Q03760	334 aa		5.21	□□□□□ -1.58
LSM7	YNL147W	STS1	P38637	319 aa		5.19	□□□□□ -1.58
LSM7	YNL147W	RTG3	P38165	486 aa		5.16	□□□□□ -1.58
LSM7	YNL147W	YLR271W	Q06152	274 aa		5.15	□□□□□ -1.59
LSM7	YNL147W	TRK1	P12685	1235 aa		5.14	□□□□□ -1.59
LSM7	YNL147W	RQC2	Q12532	1038 aa	Known RBP	5.12	□□□□□ -1.59
LSM7	YNL147W	YML082W	Q04533	649 aa	Known RBP	5.11	□□□□□ -1.59
LSM7	YNL147W	BNI4	P53858	892 aa		5.08	□□□□□ -1.6
LSM7	YNL147W	RAS1	P01119	309 aa		5.07	□□□□□ -1.6
LSM7	YNL147W	PTC2	P39966	464 aa	Known RBP	5.06	□□□□□ -1.6
LSM7	YNL147W	HAP5	Q02516	242 aa		5.06	□□□□□ -1.6
LSM7	YNL147W	PEX29	Q03370	554 aa		5.05	□□□□□ -1.6
LSM7	YNL147W	MID1	P41821	548 aa		5.01	□□□□□ -1.61
LSM7	YNL147W	GRE2	Q12068	342 aa	Known RBP	5.01	□□□□□ -1.61
LSM7	YNL147W	AMS1	P22855	1083 aa		4.99	□□□□□ -1.61
LSM7	YNL147W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LSM7	YNL147W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
LSM7	YNL147W	GUT1	P32190	709 aa		4.91	□□□□□ -1.62
LSM7	YNL147W	ATH1	P48016	1211 aa		4.9	□□□□□ -1.63
LSM7	YNL147W	AI4	P03878	556 aa		4.89	□□□□□ -1.63
LSM7	YNL147W	GAR1	P28007	205 aa	Known RBP	4.88	□□□□□ -1.63
LSM7	YNL147W	GCR2	Q01722	534 aa		4.88	□□□□□ -1.63
LSM7	YNL147W	MPH3	P0CE00	602 aa		4.87	□□□□□ -1.63
LSM7	YNL147W	NST1	P53935	1240 aa		4.87	□□□□□ -1.63
LSM7	YNL147W	RCR1	P38212	213 aa		4.86	□□□□□ -1.63
LSM7	YNL147W	CST9	Q06032	482 aa		4.86	□□□□□ -1.63
LSM7	YNL147W	BRE2	P43132	505 aa		4.85	□□□□□ -1.63
LSM7	YNL147W	GYP1	Q08484	637 aa		4.85	□□□□□ -1.63
LSM7	YNL147W	SAS4	Q04003	481 aa		4.84	□□□□□ -1.63
LSM7	YNL147W	MPC54	Q08550	464 aa		4.84	□□□□□ -1.63
LSM7	YNL147W	YEL077C	Q3E7X8	1277 aa		4.84	□□□□□ -1.63
LSM7	YNL147W	MGA2	P40578	1113 aa		4.83	□□□□□ -1.64
LSM7	YNL147W	NMA111	P53920	997 aa		4.83	□□□□□ -1.64
LSM7	YNL147W	YPR015C	Q12531	247 aa		4.79	□□□□□ -1.64
LSM7	YNL147W	PTC3	P34221	468 aa	Known RBP	4.77	□□□□□ -1.65
LSM7	YNL147W	SOL3	P38858	249 aa		4.76	□□□□□ -1.65
LSM7	YNL147W	SSP1	P38871	571 aa		4.76	□□□□□ -1.65
LSM7	YNL147W	MTC5	Q03897	1148 aa		4.76	□□□□□ -1.65
LSM7	YNL147W	RAM1	P22007	431 aa		4.75	□□□□□ -1.65
LSM7	YNL147W	MRF1	P30775	413 aa	Predicted RBP	4.75	□□□□□ -1.65
LSM7	YNL147W	DPL1	Q05567	589 aa		4.75	□□□□□ -1.65
LSM7	YNL147W	SDH2	P21801	266 aa		4.73	□□□□□ -1.65
LSM7	YNL147W	MIF2	P35201	549 aa		4.73	□□□□□ -1.65
LSM7	YNL147W	ILV3	P39522	585 aa	Known RBP	4.72	□□□□□ -1.65
LSM7	YNL147W	DMA1	P38823	416 aa		4.71	□□□□□ -1.66
LSM7	YNL147W	ISU2	Q12056	156 aa		4.7	□□□□□ -1.66
LSM7	YNL147W	ENV9	Q08651	330 aa		4.69	□□□□□ -1.66
LSM7	YNL147W	MET22	P32179	357 aa		4.67	□□□□□ -1.66
LSM7	YNL147W	EDS1	P38073	919 aa		4.67	□□□□□ -1.66
LSM7	YNL147W	MAK11	P20484	414 aa	Known RBP	4.65	□□□□□ -1.67
LSM7	YNL147W	SLI15	P38283	698 aa		4.65	□□□□□ -1.67
LSM7	YNL147W	YGR273C	P53329	174 aa		4.62	□□□□□ -1.67
LSM7	YNL147W	AIR1	P40507	360 aa	Known RBP	4.61	□□□□□ -1.67
LSM7	YNL147W	YDR444W	Q04093	687 aa		4.61	□□□□□ -1.67
LSM7	YNL147W	ERG12	P07277	443 aa		4.6	□□□□□ -1.67
LSM7	YNL147W	CDC4	P07834	779 aa		4.57	□□□□□ -1.68
LSM7	YNL147W	YDL176W	Q12027	708 aa		4.56	□□□□□ -1.68
LSM7	YNL147W	COQ8	P27697	501 aa		4.54	□□□□□ -1.68
LSM7	YNL147W	LCB5	Q06147	687 aa	Known RBP	4.54	□□□□□ -1.68
LSM7	YNL147W	NOP53	Q12080	455 aa	Known RBP	4.54	□□□□□ -1.68
LSM7	YNL147W	PDR1	P12383	1068 aa		4.53	□□□□□ -1.68
LSM7	YNL147W	PRT1	P06103	763 aa	Known RBP	4.52	□□□□□ -1.69
LSM7	YNL147W	CLA4	P48562	842 aa		4.51	□□□□□ -1.69
LSM7	YNL147W	CST6	P40535	587 aa		4.49	□□□□□ -1.69
LSM7	YNL147W	LAM6	Q08001	693 aa		4.48	□□□□□ -1.69
LSM7	YNL147W	CDC73	Q06697	393 aa		4.47	□□□□□ -1.69
LSM7	YNL147W	RPP1B	P10622	106 aa	Known RBP	4.46	□□□□□ -1.7
LSM7	YNL147W	BUD20	Q08004	166 aa	Predicted RBP	4.46	□□□□□ -1.7
LSM7	YNL147W	RAM2	P29703	316 aa		4.43	□□□□□ -1.7
LSM7	YNL147W	HED1	Q03937	162 aa		4.43	□□□□□ -1.7
LSM7	YNL147W	KEX1	P09620	729 aa		4.42	□□□□□ -1.7
LSM7	YNL147W	TRK2	P28584	889 aa		4.42	□□□□□ -1.7
LSM7	YNL147W	LEO1	P38439	464 aa		4.41	□□□□□ -1.7
LSM7	YNL147W	SAS10	Q12136	610 aa	Predicted RBP	4.41	□□□□□ -1.7
LSM7	YNL147W	SPT16	P32558	1035 aa	Known RBP	4.39	□□□□□ -1.71
LSM7	YNL147W	FRK1	Q03002	865 aa	Predicted RBP	4.39	□□□□□ -1.71
LSM7	YNL147W	RRD1	P40454	393 aa	Known RBP	4.38	□□□□□ -1.71
LSM7	YNL147W	AFT1	P22149	690 aa		4.36	□□□□□ -1.71
LSM7	YNL147W	LEU3	P08638	886 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	ASH1	P34233	588 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	IFH1	P39520	1085 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	ACO2	P39533	789 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	STR2	P47164	639 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.35	□□□□□ -1.71	not detected
LSM7	YNL147W	HST3	P53687	447 aa		4.35	□□□□□ -1.71
LSM7	YNL147W	BDP1	P46678	594 aa		4.34	□□□□□ -1.71
LSM7	YNL147W	YGR035C	P53222	116 aa		4.34	□□□□□ -1.71
LSM7	YNL147W	TAF7	Q05021	590 aa		4.34	□□□□□ -1.71
LSM7	YNL147W	SET1	P38827	1080 aa	Known RBP	4.33	□□□□□ -1.72
LSM7	YNL147W	ICP55	P40051	511 aa		4.33	□□□□□ -1.72
LSM7	YNL147W	ISM1	P48526	1002 aa		4.33	□□□□□ -1.72
LSM7	YNL147W	NPL4	P33755	580 aa		4.32	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms