RNA–Protein interactions for RNA: YNL088W

TOP2, Transcript of Topoisomerase II, yeast

Gene TOP2, Length 4,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOP2	YNL088W	DEF1	P35732	738 aa	Known RBP	3.17	□□□□□ -1.9
TOP2	YNL088W	FPR4	Q06205	392 aa	Predicted RBP	3.17	□□□□□ -1.9
TOP2	YNL088W	NMD2	P38798	1089 aa	Known RBP	3.16	□□□□□ -1.9
TOP2	YNL088W	VPS70	P47161	811 aa		3.16	□□□□□ -1.9
TOP2	YNL088W	HEM3	P28789	327 aa		3.15	□□□□□ -1.91
TOP2	YNL088W	RPA135	P22138	1203 aa	Known RBP	3.15	□□□□□ -1.91
TOP2	YNL088W	GUA1	P38625	525 aa	Known RBP	3.15	□□□□□ -1.91
TOP2	YNL088W	YNR021W	P53723	404 aa	Known RBP	3.15	□□□□□ -1.91
TOP2	YNL088W	SSA2	P10592	639 aa	Known RBP	3.14	□□□□□ -1.91
TOP2	YNL088W	TIF4632	P39936	914 aa	Known RBP	3.14	□□□□□ -1.91
TOP2	YNL088W	YAH1	Q12184	172 aa	Known RBP	3.14	□□□□□ -1.91
TOP2	YNL088W	RAD2	P07276	1031 aa		3.14	□□□□□ -1.91
TOP2	YNL088W	PMC1	P38929	1173 aa	Predicted RBP	3.14	□□□□□ -1.91
TOP2	YNL088W	TLG1	Q03322	224 aa		3.14	□□□□□ -1.91
TOP2	YNL088W	GIR2	Q03768	265 aa	Predicted RBP	3.14	□□□□□ -1.91
TOP2	YNL088W	MPE1	P35728	441 aa	Known RBP	3.13	□□□□□ -1.91
TOP2	YNL088W	FPR3	P38911	411 aa	Known RBP	3.13	□□□□□ -1.91
TOP2	YNL088W	YMR196W	Q04336	1088 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	ITT1	Q04638	464 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	TSR4	P25040	408 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	GLC3	P32775	704 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	CST6	P40535	587 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	ERP2	P39704	215 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	KEX1	P09620	729 aa		3.13	□□□□□ -1.91
TOP2	YNL088W	RIM101	P33400	625 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	YDL121C	Q07541	149 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	RPL17A	P05740	184 aa	Known RBP	3.12	□□□□□ -1.91
TOP2	YNL088W	RPL17B	P46990	184 aa	Known RBP	3.12	□□□□□ -1.91
TOP2	YNL088W	NNF1	P47149	201 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	RNH70	P53331	553 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	DAL5	P15365	543 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	SSA4	P22202	642 aa	Known RBP	3.12	□□□□□ -1.91
TOP2	YNL088W	RRP14	P36080	434 aa	Known RBP	3.12	□□□□□ -1.91
TOP2	YNL088W	TPM2	P40414	161 aa		3.12	□□□□□ -1.91
TOP2	YNL088W	RPL34A	P87262	121 aa	Predicted RBP	3.12	□□□□□ -1.91
TOP2	YNL088W	DSF2	P38213	736 aa		3.11	□□□□□ -1.91
TOP2	YNL088W	AIM7	Q12156	149 aa		3.11	□□□□□ -1.91
TOP2	YNL088W	NOC2	P39744	710 aa	Known RBP	3.11	□□□□□ -1.91
TOP2	YNL088W	SEN54	Q02825	467 aa	Predicted RBP	3.11	□□□□□ -1.91
TOP2	YNL088W	TAF13	P11747	167 aa		3.11	□□□□□ -1.91
TOP2	YNL088W	ECM16	Q04217	1267 aa	Known RBP	3.11	□□□□□ -1.91
TOP2	YNL088W	PLP2	Q12017	286 aa		3.11	□□□□□ -1.91
TOP2	YNL088W	MGA2	P40578	1113 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	MEH1	Q02205	184 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	TMA64	Q04600	565 aa	Known RBP	3.1	□□□□□ -1.91
TOP2	YNL088W	PPG1	P32838	368 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	HOS4	P40480	1083 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	CDC3	P32457	520 aa	Known RBP	3.1	□□□□□ -1.91
TOP2	YNL088W	TFB3	Q03290	321 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	YOL057W	Q08225	711 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	MFT1	P33441	392 aa	Known RBP	3.1	□□□□□ -1.91
TOP2	YNL088W	SET1	P38827	1080 aa	Known RBP	3.1	□□□□□ -1.91
TOP2	YNL088W	BOI2	P39969	1040 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	VPS27	P40343	622 aa	Known RBP	3.1	□□□□□ -1.91
TOP2	YNL088W	YLR271W	Q06152	274 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	YPR148C	Q06523	435 aa		3.1	□□□□□ -1.91
TOP2	YNL088W	VMA4	P22203	233 aa	Known RBP	3.09	□□□□□ -1.91
TOP2	YNL088W	YIL055C	P40523	627 aa	Known RBP	3.09	□□□□□ -1.91
TOP2	YNL088W	IES1	P43579	692 aa		3.09	□□□□□ -1.91
TOP2	YNL088W	HPC2	Q01448	625 aa		3.09	□□□□□ -1.91
TOP2	YNL088W	PBS2	P08018	668 aa		3.09	□□□□□ -1.92
TOP2	YNL088W	SEC20	P28791	383 aa		3.09	□□□□□ -1.92
TOP2	YNL088W	BLI1	P35727	113 aa		3.09	□□□□□ -1.92
TOP2	YNL088W	POL5	P39985	1022 aa	Known RBP	3.09	□□□□□ -1.92
TOP2	YNL088W	PSK2	Q08217	1101 aa		3.09	□□□□□ -1.92
TOP2	YNL088W	SSB1	P11484	613 aa	Known RBP	3.08	□□□□□ -1.92
TOP2	YNL088W	SSB2	P40150	613 aa	Known RBP	3.08	□□□□□ -1.92
TOP2	YNL088W	TFG1	P41895	735 aa	Predicted RBP	3.08	□□□□□ -1.92
TOP2	YNL088W	HSP82	P02829	709 aa	Known RBP	3.08	□□□□□ -1.92
TOP2	YNL088W	KAR1	P11927	433 aa		3.08	□□□□□ -1.92
TOP2	YNL088W	ENT2	Q05785	613 aa		3.08	□□□□□ -1.92
TOP2	YNL088W	NOP2	P40991	618 aa	Known RBP	3.07	□□□□□ -1.92
TOP2	YNL088W	COG4	Q06096	861 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	OPI1	P21957	404 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	OYE2	Q03558	400 aa	Known RBP	3.07	□□□□□ -1.92
TOP2	YNL088W	HAT1	Q12341	374 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	BIM1	P40013	344 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	DNM1	P54861	757 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	ERP4	Q12450	207 aa		3.07	□□□□□ -1.92
TOP2	YNL088W	OXP1	P28273	1286 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	YGL081W	P53156	320 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	ESF2	P53743	316 aa	Known RBP	3.06	□□□□□ -1.92
TOP2	YNL088W	YOL098C	Q12496	1037 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	ALD2	P47771	506 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	PKC1	P24583	1151 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	CPS1	P27614	576 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	YJL007C	P47080	104 aa		3.06	□□□□□ -1.92
TOP2	YNL088W	SSF2	Q12153	453 aa	Predicted RBP	3.06	□□□□□ -1.92
TOP2	YNL088W	PRY3	P47033	881 aa		3.05	□□□□□ -1.92
TOP2	YNL088W	SYH1	Q02875	849 aa	Known RBP	3.05	□□□□□ -1.92
TOP2	YNL088W	REB1	P21538	810 aa		3.05	□□□□□ -1.92
TOP2	YNL088W	STM1	P39015	273 aa	Known RBP	3.05	□□□□□ -1.92
TOP2	YNL088W	IPL1	P38991	367 aa		3.05	□□□□□ -1.92
TOP2	YNL088W	ATG32	P40458	529 aa		3.05	□□□□□ -1.92
TOP2	YNL088W	ENV11	P53246	860 aa		3.05	□□□□□ -1.92
TOP2	YNL088W	PWP2	P25635	923 aa	Known RBP	3.04	□□□□□ -1.92
TOP2	YNL088W	CST9	Q06032	482 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	NKP1	Q12493	238 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	TY4B-P	A0A0B7P3V8	1104 aa		3.04	□□□□□ -1.92
TOP2	YNL088W	MAK16	P10962	306 aa	Predicted RBP	3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms